RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 PUSL1Q8N0Z8 303 aaKnown RBP5.4□□□□□ -1.54
YBX3-209ENST00000540747 KIR2DL5AQ8N109 375 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 OR10J5Q8NHC4 309 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 KIR2DL5BQ8NHK3 375 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 TMEM167AQ8TBQ9 72 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 ASB13Q8WXK3 278 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 MARC2Q969Z3 335 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 OR2A7Q96R45 310 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 SLC2A9Q9NRM0 540 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 FBXL7Q9UJT9 491 aa5.4□□□□□ -1.54
YBX3-209ENST00000540747 KLK5Q9Y337 293 aaPredicted RBP5.4□□□□□ -1.54
YBX3-209ENST00000540747 IGLV11-55A0A075B6I3 123 aa5.39□□□□□ -1.55
YBX3-209ENST00000540747 FXYD6-FXYD2A0A087WZ82 144 aa5.39□□□□□ -1.55
YBX3-209ENST00000540747 MFSD2BA6NFX1 497 aa5.39□□□□□ -1.55
YBX3-209ENST00000540747 HMSDA8MTL9 139 aa5.39□□□□□ -1.55
YBX3-209ENST00000540747 KBTBD11O94819 623 aa5.39□□□□□ -1.55
YBX3-209ENST00000540747 SIX6O95475 246 aa5.39□□□□□ -1.55
YBX3-209ENST00000540747 IGHV3-23P01764 117 aa5.39□□□□□ -1.55
YBX3-209ENST00000540747 FCER2P06734 321 aa5.39□□□□□ -1.55
YBX3-209ENST00000540747 AREGP15514 252 aa5.39□□□□□ -1.55
YBX3-209ENST00000540747 CTRB1P17538 263 aa5.39□□□□□ -1.55
YBX3-209ENST00000540747 AP2S1P53680 142 aaPredicted RBP5.39□□□□□ -1.55
YBX3-209ENST00000540747 APOC4P55056 127 aa5.39□□□□□ -1.55
YBX3-209ENST00000540747 ELLP55199 621 aaPredicted RBP5.39□□□□□ -1.55
YBX3-209ENST00000540747 RPL30P62888 115 aaKnown RBP5.39□□□□□ -1.55
YBX3-209ENST00000540747 ANKRD55Q3KP44 614 aa5.39□□□□□ -1.55
YBX3-209ENST00000540747 FAM106AQ4KMX7 169 aa5.39□□□□□ -1.55
YBX3-209ENST00000540747 RNASE10Q5GAN6 216 aaKnown RBP5.39□□□□□ -1.55
YBX3-209ENST00000540747 CTRB2Q6GPI1 263 aa5.39□□□□□ -1.55
YBX3-209ENST00000540747 OR4A47Q6IF82 309 aa5.39□□□□□ -1.55
YBX3-209ENST00000540747 CLEC19AQ6UXS0 136 aa5.39□□□□□ -1.55
YBX3-209ENST00000540747 TMUB2Q71RG4 321 aa5.39□□□□□ -1.55
YBX3-209ENST00000540747 COMMD7Q86VX2 200 aa5.39□□□□□ -1.55
YBX3-209ENST00000540747 OR2C3Q8N628 320 aa5.39□□□□□ -1.55
YBX3-209ENST00000540747 OR56B1Q8NGI3 324 aa5.39□□□□□ -1.55
YBX3-209ENST00000540747 PHLDA1Q8WV24 401 aaPredicted RBP5.39□□□□□ -1.55
YBX3-209ENST00000540747 MAFIPQ8WZ33 124 aa5.39□□□□□ -1.55
YBX3-209ENST00000540747 SPAG8Q99932 426 aaPredicted RBP5.39□□□□□ -1.55
YBX3-209ENST00000540747 PRRT1Q99946 306 aa5.39□□□□□ -1.55
YBX3-209ENST00000540747 FXYD6Q9H0Q3 95 aa5.39□□□□□ -1.55
YBX3-209ENST00000540747 C5orf66Q9H5L9 145 aa5.39□□□□□ -1.55
YBX3-209ENST00000540747 IFT46Q9NQC8 304 aa5.39□□□□□ -1.55
YBX3-209ENST00000540747 COMMD9Q9P000 198 aa5.39□□□□□ -1.55
YBX3-209ENST00000540747 A0A1B0GVY2 172 aa5.38□□□□□ -1.55
YBX3-209ENST00000540747 M0QYG6 137 aa5.38□□□□□ -1.55
YBX3-209ENST00000540747 RAB27BO00194 218 aa5.38□□□□□ -1.55
YBX3-209ENST00000540747 TSPAN4O14817 238 aa5.38□□□□□ -1.55
YBX3-209ENST00000540747 MPC2O95563 127 aa5.38□□□□□ -1.55
YBX3-209ENST00000540747 CD74P04233 296 aa5.38□□□□□ -1.55
YBX3-209ENST00000540747 OR4E1P0C645 316 aa5.38□□□□□ -1.55
YBX3-209ENST00000540747 HIST1H1DP16402 221 aaKnown RBP5.38□□□□□ -1.55
YBX3-209ENST00000540747 CXCL2P19875 107 aa5.38□□□□□ -1.55
YBX3-209ENST00000540747 S100A11P31949 105 aa5.38□□□□□ -1.55
YBX3-209ENST00000540747 MAS1LP35410 378 aa5.38□□□□□ -1.55
YBX3-209ENST00000540747 RPL27AP46776 148 aaKnown RBP5.38□□□□□ -1.55
YBX3-209ENST00000540747 FGL1Q08830 312 aa5.38□□□□□ -1.55
YBX3-209ENST00000540747 ARFRP1Q13795 201 aa5.38□□□□□ -1.55
YBX3-209ENST00000540747 SCGB2B2Q4G0G5 96 aa5.38□□□□□ -1.55
YBX3-209ENST00000540747 TMED4Q7Z7H5 227 aa5.38□□□□□ -1.55
YBX3-209ENST00000540747 CCDC28AQ8IWP9 274 aa5.38□□□□□ -1.55
YBX3-209ENST00000540747 VKORC1L1Q8N0U8 176 aa5.38□□□□□ -1.55
YBX3-209ENST00000540747 OR1L6Q8NGR2 347 aa5.38□□□□□ -1.55
YBX3-209ENST00000540747 ZNF502Q8TBZ5 544 aa5.38□□□□□ -1.55
YBX3-209ENST00000540747 LRRC20Q8TCA0 184 aa5.38□□□□□ -1.55
YBX3-209ENST00000540747 TMEM190Q8WZ59 177 aa5.38□□□□□ -1.55
YBX3-209ENST00000540747 RAB3CQ96E17 227 aa5.38□□□□□ -1.55
YBX3-209ENST00000540747 ZNF414Q96IQ9 312 aa5.38□□□□□ -1.55
YBX3-209ENST00000540747 MRPL27Q9P0M9 148 aaKnown RBP5.38□□□□□ -1.55
YBX3-209ENST00000540747 S4R3C0 116 aa5.38□□□□□ -1.55
YBX3-209ENST00000540747 TRBV7-1A0A0A6YYK4 115 aa5.37□□□□□ -1.55
YBX3-209ENST00000540747 IGKV1D-13A0A0B4J2D9 117 aa5.37□□□□□ -1.55
YBX3-209ENST00000540747 A0A0D9SG52 128 aa5.37□□□□□ -1.55
YBX3-209ENST00000540747 IGLC7A0M8Q6 106 aa5.37□□□□□ -1.55
YBX3-209ENST00000540747 ZNF320A2RRD8 509 aa5.37□□□□□ -1.55
YBX3-209ENST00000540747 TMEM235A6NFC5 223 aa5.37□□□□□ -1.55
YBX3-209ENST00000540747 ARPC5O15511 151 aa5.37□□□□□ -1.55
YBX3-209ENST00000540747 FCGR3BO75015 233 aa5.37□□□□□ -1.55
YBX3-209ENST00000540747 ACTL6BO94805 426 aa5.37□□□□□ -1.55
YBX3-209ENST00000540747 CLEC3BP05452 202 aa5.37□□□□□ -1.55
YBX3-209ENST00000540747 IGKV1-13P0DP09 117 aa5.37□□□□□ -1.55
YBX3-209ENST00000540747 MYOD1P15172 320 aa5.37□□□□□ -1.55
YBX3-209ENST00000540747 HIST1H1BP16401 226 aaKnown RBP5.37□□□□□ -1.55
YBX3-209ENST00000540747 GNB3P16520 340 aa5.37□□□□□ -1.55
YBX3-209ENST00000540747 TBPP20226 339 aa5.37□□□□□ -1.55
YBX3-209ENST00000540747 FCGR2BP31994 310 aaPredicted RBP5.37□□□□□ -1.55
YBX3-209ENST00000540747 CBX5P45973 191 aa5.37□□□□□ -1.55
YBX3-209ENST00000540747 TAS2R31P59538 309 aa5.37□□□□□ -1.55
YBX3-209ENST00000540747 ARPC4P59998 168 aa5.37□□□□□ -1.55
YBX3-209ENST00000540747 LPCAT3Q6P1A2 487 aa5.37□□□□□ -1.55
YBX3-209ENST00000540747 KCTD9Q7L273 389 aa5.37□□□□□ -1.55
YBX3-209ENST00000540747 TMEM217Q8N7C4 229 aa5.37□□□□□ -1.55
YBX3-209ENST00000540747 ZNF645Q8N7E2 425 aa5.37□□□□□ -1.55
YBX3-209ENST00000540747 OR4D10Q8NGI6 311 aa5.37□□□□□ -1.55
YBX3-209ENST00000540747 OR10R2Q8NGX6 335 aa5.37□□□□□ -1.55
YBX3-209ENST00000540747 SUN5Q8TC36 379 aa5.37□□□□□ -1.55
YBX3-209ENST00000540747 SCARB1Q8WTV0 552 aa5.37□□□□□ -1.55
YBX3-209ENST00000540747 EEF1AKMT3Q96AZ1 226 aa5.37□□□□□ -1.55
YBX3-209ENST00000540747 SCGB3A2Q96PL1 93 aa5.37□□□□□ -1.55
YBX3-209ENST00000540747 PDCD10Q9BUL8 212 aa5.37□□□□□ -1.55
YBX3-209ENST00000540747 MFFQ9GZY8 342 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms