RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 OR1L6Q8NGR2 347 aa11.32□□□□□ -0.6
USB1-203ENST00000539737 LHFPL5Q8TAF8 219 aa11.32□□□□□ -0.6
USB1-203ENST00000539737 THYN1Q9P016 225 aa11.32□□□□□ -0.6
USB1-203ENST00000539737 FBXL7Q9UJT9 491 aa11.32□□□□□ -0.6
USB1-203ENST00000539737 IGLV11-55A0A075B6I3 123 aa11.31□□□□□ -0.6
USB1-203ENST00000539737 EDN2P20800 178 aa11.31□□□□□ -0.6
USB1-203ENST00000539737 SUPT4H1P63272 117 aaKnown RBP11.31□□□□□ -0.6
USB1-203ENST00000539737 KLF5Q13887 457 aaPredicted RBP11.31□□□□□ -0.6
USB1-203ENST00000539737 LCN12Q6JVE5 192 aa11.31□□□□□ -0.6
USB1-203ENST00000539737 C19orf35Q6ZS72 473 aa11.31□□□□□ -0.6
USB1-203ENST00000539737 GTSCR1Q86UQ5 136 aa11.31□□□□□ -0.6
USB1-203ENST00000539737 LGI3Q8N145 548 aa11.31□□□□□ -0.6
USB1-203ENST00000539737 SLC35G3Q8N808 338 aa11.31□□□□□ -0.6
USB1-203ENST00000539737 FANCD2OSQ96PS1 177 aa11.31□□□□□ -0.6
USB1-203ENST00000539737 A0A0B4J293 547 aa11.3□□□□□ -0.6
USB1-203ENST00000539737 A0A0B4J2A0 478 aa11.3□□□□□ -0.6
USB1-203ENST00000539737 DUXBA0A1W2PPF3 345 aa11.3□□□□□ -0.6
USB1-203ENST00000539737 A8MZ25 164 aa11.3□□□□□ -0.6
USB1-203ENST00000539737 LYRM1O43325 122 aa11.3□□□□□ -0.6
USB1-203ENST00000539737 IFNA17P01571 189 aa11.3□□□□□ -0.6
USB1-203ENST00000539737 VAMP1P23763 118 aa11.3□□□□□ -0.6
USB1-203ENST00000539737 BTCP35070 178 aa11.3□□□□□ -0.6
USB1-203ENST00000539737 ZNF846Q147U1 533 aa11.3□□□□□ -0.6
USB1-203ENST00000539737 IZUMO4Q1ZYL8 232 aa11.3□□□□□ -0.6
USB1-203ENST00000539737 EEF1AKMT3Q96AZ1 226 aa11.3□□□□□ -0.6
USB1-203ENST00000539737 CXorf58Q96LI9 332 aa11.3□□□□□ -0.6
USB1-203ENST00000539737 TUBA4BQ9H853 241 aa11.3□□□□□ -0.6
USB1-203ENST00000539737 CACFD1Q9UGQ2 172 aa11.3□□□□□ -0.6
USB1-203ENST00000539737 SHPKQ9UHJ6 478 aa11.3□□□□□ -0.6
USB1-203ENST00000539737 F11RQ9Y624 299 aaKnown RBP11.3□□□□□ -0.6
USB1-203ENST00000539737 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.29□□□□□ -0.6
USB1-203ENST00000539737 A0A0G2JRQ6 117 aa11.29□□□□□ -0.6
USB1-203ENST00000539737 ST8SIA3O43173 380 aa11.29□□□□□ -0.6
USB1-203ENST00000539737 SFT2D2O95562 160 aa11.29□□□□□ -0.6
USB1-203ENST00000539737 AARDQ4LEZ3 155 aa11.29□□□□□ -0.6
USB1-203ENST00000539737 ZNF114Q8NC26 417 aa11.29□□□□□ -0.6
USB1-203ENST00000539737 OR1P1Q8NH06 330 aa11.29□□□□□ -0.6
USB1-203ENST00000539737 HIPK2Q9H2X6 1198 aa11.29□□□□□ -0.6
USB1-203ENST00000539737 ENY2Q9NPA8 101 aa11.29□□□□□ -0.6
USB1-203ENST00000539737 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.29□□□□□ -0.6
USB1-203ENST00000539737 CACNG5Q9UF02 275 aa11.29□□□□□ -0.6
USB1-203ENST00000539737 INS-IGF2F8WCM5 200 aa11.28□□□□□ -0.6
USB1-203ENST00000539737 NDUFB8O95169 186 aa11.28□□□□□ -0.6
USB1-203ENST00000539737 SULT1A3P0DMM9 295 aa11.28□□□□□ -0.6
USB1-203ENST00000539737 SULT1A4P0DMN0 295 aa11.28□□□□□ -0.6
USB1-203ENST00000539737 HOXA1P49639 335 aaPredicted RBP11.28□□□□□ -0.6
USB1-203ENST00000539737 ERHP84090 104 aaKnown RBP11.28□□□□□ -0.6
USB1-203ENST00000539737 PPP1R1AQ13522 171 aa11.28□□□□□ -0.6
USB1-203ENST00000539737 OR2C3Q8N628 320 aa11.28□□□□□ -0.6
USB1-203ENST00000539737 OR52E5Q8NH55 327 aa11.28□□□□□ -0.6
USB1-203ENST00000539737 GPR146Q96CH1 333 aa11.28□□□□□ -0.6
USB1-203ENST00000539737 SIGLEC8Q9NYZ4 499 aa11.28□□□□□ -0.6
USB1-203ENST00000539737 PRR13Q9NZ81 148 aa11.28□□□□□ -0.6
USB1-203ENST00000539737 TRBV7-1A0A0A6YYK4 115 aa11.27□□□□□ -0.61
USB1-203ENST00000539737 RBMY1BA6NDE4 496 aaKnown RBP11.27□□□□□ -0.61
USB1-203ENST00000539737 RBMY1EA6NEQ0 496 aaKnown RBP11.27□□□□□ -0.61
USB1-203ENST00000539737 PLA2G10O15496 165 aa11.27□□□□□ -0.61
USB1-203ENST00000539737 HLA-AP01891 365 aaKnown RBP11.27□□□□□ -0.61
USB1-203ENST00000539737 CSN3P07498 182 aa11.27□□□□□ -0.61
USB1-203ENST00000539737 RBMY1DP0C7P1 496 aaKnown RBP11.27□□□□□ -0.61
USB1-203ENST00000539737 SPCS3P61009 180 aa11.27□□□□□ -0.61
USB1-203ENST00000539737 NMSQ5H8A3 153 aa11.27□□□□□ -0.61
USB1-203ENST00000539737 SLC25A24Q6NUK1 477 aa11.27□□□□□ -0.61
USB1-203ENST00000539737 DEFB125Q8N687 156 aa11.27□□□□□ -0.61
USB1-203ENST00000539737 LRTM2Q8N967 370 aa11.27□□□□□ -0.61
USB1-203ENST00000539737 OR2K2Q8NGT1 345 aa11.27□□□□□ -0.61
USB1-203ENST00000539737 VN1R17PQ8TDU5 208 aa11.27□□□□□ -0.61
USB1-203ENST00000539737 DYNLRB2Q8TF09 96 aa11.27□□□□□ -0.61
USB1-203ENST00000539737 DMRT1Q9Y5R6 373 aa11.27□□□□□ -0.61
USB1-203ENST00000539737 MFSD2BA6NFX1 497 aa11.26□□□□□ -0.61
USB1-203ENST00000539737 BMPR1BO00238 502 aa11.26□□□□□ -0.61
USB1-203ENST00000539737 CD7P09564 240 aa11.26□□□□□ -0.61
USB1-203ENST00000539737 SNCAP37840 140 aa11.26□□□□□ -0.61
USB1-203ENST00000539737 SMCO1Q147U7 214 aa11.26□□□□□ -0.61
USB1-203ENST00000539737 SPINK9Q5DT21 86 aa11.26□□□□□ -0.61
USB1-203ENST00000539737 MZT2BQ6NZ67 158 aa11.26□□□□□ -0.61
USB1-203ENST00000539737 Q6ZRM9 215 aa11.26□□□□□ -0.61
USB1-203ENST00000539737 LYZL2Q7Z4W2 148 aa11.26□□□□□ -0.61
USB1-203ENST00000539737 CCDC140Q96MF4 163 aa11.26□□□□□ -0.61
USB1-203ENST00000539737 ATP6V0BQ99437 205 aa11.26□□□□□ -0.61
USB1-203ENST00000539737 C20orf85Q9H1P6 137 aa11.26□□□□□ -0.61
USB1-203ENST00000539737 GGCTO75223 188 aaKnown RBP11.25□□□□□ -0.61
USB1-203ENST00000539737 UPK1BO75841 260 aa11.25□□□□□ -0.61
USB1-203ENST00000539737 ARL3P36405 182 aa11.25□□□□□ -0.61
USB1-203ENST00000539737 SUB1P53999 127 aaKnown RBP eCLIP11.25□□□□□ -0.61
USB1-203ENST00000539737 CD81P60033 236 aa11.25□□□□□ -0.61
USB1-203ENST00000539737 ASAH1Q13510 395 aa11.25□□□□□ -0.61
USB1-203ENST00000539737 ANKRD55Q3KP44 614 aa11.25□□□□□ -0.61
USB1-203ENST00000539737 ZNF502Q8TBZ5 544 aa11.25□□□□□ -0.61
USB1-203ENST00000539737 LINC00476Q8WZB0 136 aa11.25□□□□□ -0.61
USB1-203ENST00000539737 FLVCR2Q9UPI3 526 aa11.25□□□□□ -0.61
USB1-203ENST00000539737 TMED3Q9Y3Q3 217 aa11.25□□□□□ -0.61
USB1-203ENST00000539737 PCLOQ9Y6V0 5065 aa11.24□□□□□ -0.61
USB1-203ENST00000539737 A0A1B0GU03 582 aa11.24□□□□□ -0.61
USB1-203ENST00000539737 C9orf170A2RU37 121 aa11.24□□□□□ -0.61
USB1-203ENST00000539737 CORTO00230 105 aa11.24□□□□□ -0.61
USB1-203ENST00000539737 LY6G6CO95867 125 aa11.24□□□□□ -0.61
USB1-203ENST00000539737 IGHV3-23P01764 117 aa11.24□□□□□ -0.61
USB1-203ENST00000539737 OR4E1P0C645 316 aa11.24□□□□□ -0.61
USB1-203ENST00000539737 SLC25A6P12236 298 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms