RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 MISP3Q96FF7 219 aa12.72□□□□□ -0.37
TRAF3-204ENST00000539721 TMEM68Q96MH6 324 aa12.72□□□□□ -0.37
TRAF3-204ENST00000539721 SLA2Q9H6Q3 261 aa12.72□□□□□ -0.37
TRAF3-204ENST00000539721 UQCC1Q9NVA1 299 aa12.72□□□□□ -0.37
TRAF3-204ENST00000539721 UBE2L5PA0A1B0GUS4 154 aa12.71□□□□□ -0.37
TRAF3-204ENST00000539721 SMCO3A2RU48 225 aa12.71□□□□□ -0.37
TRAF3-204ENST00000539721 IFNA5P01569 189 aa12.71□□□□□ -0.37
TRAF3-204ENST00000539721 CRIP2P52943 208 aaPredicted RBP12.71□□□□□ -0.37
TRAF3-204ENST00000539721 AKIRIN2Q53H80 203 aa12.71□□□□□ -0.37
TRAF3-204ENST00000539721 PVRIGQ6DKI7 326 aa12.71□□□□□ -0.37
TRAF3-204ENST00000539721 Q6ZS46 218 aa12.71□□□□□ -0.37
TRAF3-204ENST00000539721 UBAC2Q8NBM4 344 aa12.71□□□□□ -0.37
TRAF3-204ENST00000539721 OR1L6Q8NGR2 347 aa12.71□□□□□ -0.37
TRAF3-204ENST00000539721 ZNF418Q8TF45 676 aaPredicted RBP12.71□□□□□ -0.37
TRAF3-204ENST00000539721 GGACTQ9BVM4 153 aa12.71□□□□□ -0.37
TRAF3-204ENST00000539721 NPFFR1Q9GZQ6 430 aa12.71□□□□□ -0.37
TRAF3-204ENST00000539721 HIVEP1P15822 2718 aa12.71□□□□□ -0.37
TRAF3-204ENST00000539721 TRAV41A0A0B4J266 112 aa12.71□□□□□ -0.38
TRAF3-204ENST00000539721 G3V318 75 aa12.71□□□□□ -0.38
TRAF3-204ENST00000539721 CORTO00230 105 aa12.71□□□□□ -0.38
TRAF3-204ENST00000539721 OPRK1P41145 380 aa12.71□□□□□ -0.38
TRAF3-204ENST00000539721 IFITM2Q01629 132 aa12.71□□□□□ -0.38
TRAF3-204ENST00000539721 CD69Q07108 199 aa12.71□□□□□ -0.38
TRAF3-204ENST00000539721 FAM110DQ8TAY7 271 aaPredicted RBP12.71□□□□□ -0.38
TRAF3-204ENST00000539721 PRSS22Q9GZN4 317 aa12.71□□□□□ -0.38
TRAF3-204ENST00000539721 LINC00527Q9UJ94 153 aa12.71□□□□□ -0.38
TRAF3-204ENST00000539721 TRIM77I1YAP6 450 aa12.7□□□□□ -0.38
TRAF3-204ENST00000539721 CYB5BO43169 146 aa12.7□□□□□ -0.38
TRAF3-204ENST00000539721 PRH1P02810 166 aa12.7□□□□□ -0.38
TRAF3-204ENST00000539721 IGF1P05019 195 aa12.7□□□□□ -0.38
TRAF3-204ENST00000539721 VWC2Q2TAL6 325 aa12.7□□□□□ -0.38
TRAF3-204ENST00000539721 ARSJQ5FYB0 599 aaPredicted RBP12.7□□□□□ -0.38
TRAF3-204ENST00000539721 BAP18Q8IXM2 172 aa12.7□□□□□ -0.38
TRAF3-204ENST00000539721 HSD17B11Q8NBQ5 300 aa12.7□□□□□ -0.38
TRAF3-204ENST00000539721 ESM1Q9NQ30 184 aa12.7□□□□□ -0.38
TRAF3-204ENST00000539721 DMRT1Q9Y5R6 373 aa12.7□□□□□ -0.38
TRAF3-204ENST00000539721 AP4M1O00189 453 aa12.69□□□□□ -0.38
TRAF3-204ENST00000539721 CFDP00746 253 aaPredicted RBP12.69□□□□□ -0.38
TRAF3-204ENST00000539721 GPX4P36969 197 aaPredicted RBP12.69□□□□□ -0.38
TRAF3-204ENST00000539721 TEX261Q6UWH6 196 aa12.69□□□□□ -0.38
TRAF3-204ENST00000539721 SLC16A13Q7RTY0 426 aa12.69□□□□□ -0.38
TRAF3-204ENST00000539721 SCGB1C1Q8TD33 95 aa12.69□□□□□ -0.38
TRAF3-204ENST00000539721 AKR1C1Q04828 323 aa12.69□□□□□ -0.38
TRAF3-204ENST00000539721 EXOSC2Q13868 293 aaKnown RBP12.69□□□□□ -0.38
TRAF3-204ENST00000539721 MLANAQ16655 118 aa12.69□□□□□ -0.38
TRAF3-204ENST00000539721 ETFRF1Q6IPR1 90 aa12.69□□□□□ -0.38
TRAF3-204ENST00000539721 CACNG8Q8WXS5 425 aa12.69□□□□□ -0.38
TRAF3-204ENST00000539721 SLC35E1Q96K37 410 aa12.69□□□□□ -0.38
TRAF3-204ENST00000539721 NOL4LQ96MY1 436 aaPredicted RBP12.69□□□□□ -0.38
TRAF3-204ENST00000539721 ARV1Q9H2C2 271 aa12.69□□□□□ -0.38
TRAF3-204ENST00000539721 FNDC4Q9H6D8 234 aaPredicted RBP12.69□□□□□ -0.38
TRAF3-204ENST00000539721 IGLV11-55A0A075B6I3 123 aa12.68□□□□□ -0.38
TRAF3-204ENST00000539721 RPS10-NUDT3A0A1W2PQS6 291 aa12.68□□□□□ -0.38
TRAF3-204ENST00000539721 FNDC10F2Z333 226 aa12.68□□□□□ -0.38
TRAF3-204ENST00000539721 CLDN34H7C241 214 aa12.68□□□□□ -0.38
TRAF3-204ENST00000539721 TSPAN9O75954 239 aa12.68□□□□□ -0.38
TRAF3-204ENST00000539721 MT-CO2P00403 227 aa12.68□□□□□ -0.38
TRAF3-204ENST00000539721 FGF7P21781 194 aa12.68□□□□□ -0.38
TRAF3-204ENST00000539721 C19orf54Q5BKX5 351 aa12.68□□□□□ -0.38
TRAF3-204ENST00000539721 FANCD2OSQ96PS1 177 aa12.68□□□□□ -0.38
TRAF3-204ENST00000539721 GINS3Q9BRX5 216 aa12.68□□□□□ -0.38
TRAF3-204ENST00000539721 PARD6GQ9BYG4 376 aaPredicted RBP12.68□□□□□ -0.38
TRAF3-204ENST00000539721 WDR61Q9GZS3 305 aaKnown RBP12.68□□□□□ -0.38
TRAF3-204ENST00000539721 ZNF702PQ9H963 129 aa12.68□□□□□ -0.38
TRAF3-204ENST00000539721 NPVFQ9HCQ7 196 aa12.68□□□□□ -0.38
TRAF3-204ENST00000539721 ZNF355PQ9NSJ1 428 aa12.68□□□□□ -0.38
TRAF3-204ENST00000539721 IGHV3-21A0A0B4J1V1 117 aa12.67□□□□□ -0.38
TRAF3-204ENST00000539721 HIST1H1BP16401 226 aaKnown RBP12.67□□□□□ -0.38
TRAF3-204ENST00000539721 HILS1P60008 231 aa12.67□□□□□ -0.38
TRAF3-204ENST00000539721 GAMTQ14353 236 aa12.67□□□□□ -0.38
TRAF3-204ENST00000539721 TMEM95Q3KNT9 176 aa12.67□□□□□ -0.38
TRAF3-204ENST00000539721 ALKAL2Q6UX46 152 aa12.67□□□□□ -0.38
TRAF3-204ENST00000539721 TREML4Q6UXN2 200 aa12.67□□□□□ -0.38
TRAF3-204ENST00000539721 OR2T6Q8NHC8 308 aa12.67□□□□□ -0.38
TRAF3-204ENST00000539721 THYN1Q9P016 225 aa12.67□□□□□ -0.38
TRAF3-204ENST00000539721 IFNA7P01567 189 aa12.66□□□□□ -0.38
TRAF3-204ENST00000539721 IGHV3-48P01763 117 aa12.66□□□□□ -0.38
TRAF3-204ENST00000539721 FAM157CP0CG43 387 aa12.66□□□□□ -0.38
TRAF3-204ENST00000539721 ATP6V0CP27449 155 aa12.66□□□□□ -0.38
TRAF3-204ENST00000539721 RUNX1Q01196 453 aa12.66□□□□□ -0.38
TRAF3-204ENST00000539721 BTNL8Q6UX41 500 aa12.66□□□□□ -0.38
TRAF3-204ENST00000539721 ZNF680Q8NEM1 530 aa12.66□□□□□ -0.38
TRAF3-204ENST00000539721 TAF15Q92804 592 aaKnown RBP eCLIP12.66□□□□□ -0.38
TRAF3-204ENST00000539721 ACY3Q96HD9 319 aa12.66□□□□□ -0.38
TRAF3-204ENST00000539721 ZNF580Q9UK33 172 aa12.66□□□□□ -0.38
TRAF3-204ENST00000539721 WDR83OSQ9Y284 106 aa12.66□□□□□ -0.38
TRAF3-204ENST00000539721 FAM181BA6NEQ2 426 aa12.66□□□□□ -0.38
TRAF3-204ENST00000539721 I3L2K1 104 aa12.66□□□□□ -0.38
TRAF3-204ENST00000539721 OR2J3O76001 311 aa12.66□□□□□ -0.38
TRAF3-204ENST00000539721 GNPNAT1Q96EK6 184 aaPredicted RBP12.66□□□□□ -0.38
TRAF3-204ENST00000539721 PHYHIPLQ96FC7 376 aa12.66□□□□□ -0.38
TRAF3-204ENST00000539721 JMJD8Q96S16 334 aa12.66□□□□□ -0.38
TRAF3-204ENST00000539721 SH3BGRL3Q9H299 93 aa12.66□□□□□ -0.38
TRAF3-204ENST00000539721 MTORP42345 2549 aa12.66□□□□□ -0.38
TRAF3-204ENST00000539721 K7EIM0 57 aa12.65□□□□□ -0.38
TRAF3-204ENST00000539721 SOX15O60248 233 aa12.65□□□□□ -0.38
TRAF3-204ENST00000539721 CRLF1O75462 422 aa12.65□□□□□ -0.38
TRAF3-204ENST00000539721 RNASE1P07998 156 aaKnown RBP12.65□□□□□ -0.38
TRAF3-204ENST00000539721 MDKP21741 143 aaPredicted RBP12.65□□□□□ -0.38
TRAF3-204ENST00000539721 EIF5AL1Q6IS14 154 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms