RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 COA6Q5JTJ3 125 aaKnown RBP11.41□□□□□ -0.58
UBE3B-210ENST00000539599 GBGT1Q8N5D6 347 aa11.41□□□□□ -0.58
UBE3B-210ENST00000539599 TSTD3H0UI37 97 aa11.41□□□□□ -0.58
UBE3B-210ENST00000539599 CEACAM8P31997 349 aaPredicted RBP11.41□□□□□ -0.58
UBE3B-210ENST00000539599 PDLIM4P50479 330 aa11.41□□□□□ -0.58
UBE3B-210ENST00000539599 DMRTC2Q8IXT2 367 aaPredicted RBP11.41□□□□□ -0.58
UBE3B-210ENST00000539599 CTSZQ9UBR2 303 aa11.41□□□□□ -0.58
UBE3B-210ENST00000539599 VPS13CQ709C8 3753 aa11.41□□□□□ -0.58
UBE3B-210ENST00000539599 CGB1A6NKQ9 187 aa11.4□□□□□ -0.58
UBE3B-210ENST00000539599 SCGB1D1O95968 90 aa11.4□□□□□ -0.58
UBE3B-210ENST00000539599 RTL8BQ17RB0 113 aa11.4□□□□□ -0.58
UBE3B-210ENST00000539599 TDRG1Q3Y452 100 aa11.4□□□□□ -0.58
UBE3B-210ENST00000539599 FAM57AQ8TBR7 257 aa11.4□□□□□ -0.58
UBE3B-210ENST00000539599 SFXN3Q9BWM7 321 aa11.4□□□□□ -0.58
UBE3B-210ENST00000539599 FNDC4Q9H6D8 234 aaPredicted RBP11.4□□□□□ -0.58
UBE3B-210ENST00000539599 TNFSF4P23510 183 aa11.4□□□□□ -0.58
UBE3B-210ENST00000539599 WT1-ASQ06250 92 aa11.4□□□□□ -0.58
UBE3B-210ENST00000539599 IGFL3Q6UXB1 125 aa11.4□□□□□ -0.58
UBE3B-210ENST00000539599 SAP30LQ9HAJ7 183 aa11.4□□□□□ -0.58
UBE3B-210ENST00000539599 PRNDQ9UKY0 176 aa11.4□□□□□ -0.58
UBE3B-210ENST00000539599 HRNRQ86YZ3 2850 aaPredicted RBP11.4□□□□□ -0.58
UBE3B-210ENST00000539599 TRAV34A0A0B4J273 112 aa11.39□□□□□ -0.59
UBE3B-210ENST00000539599 hADV38S2A0JD32 116 aa11.39□□□□□ -0.59
UBE3B-210ENST00000539599 C17orf100A8MU93 164 aa11.39□□□□□ -0.59
UBE3B-210ENST00000539599 H0YJW9 148 aa11.39□□□□□ -0.59
UBE3B-210ENST00000539599 MGST1P10620 155 aaKnown RBP11.39□□□□□ -0.59
UBE3B-210ENST00000539599 RAB31Q13636 194 aa11.39□□□□□ -0.59
UBE3B-210ENST00000539599 C1orf174Q8IYL3 243 aa11.39□□□□□ -0.59
UBE3B-210ENST00000539599 ST6GALNAC3Q8NDV1 305 aa11.39□□□□□ -0.59
UBE3B-210ENST00000539599 OR1L6Q8NGR2 347 aa11.39□□□□□ -0.59
UBE3B-210ENST00000539599 OR5R1Q8NH85 324 aa11.39□□□□□ -0.59
UBE3B-210ENST00000539599 MISP3Q96FF7 219 aa11.39□□□□□ -0.59
UBE3B-210ENST00000539599 SSBP3Q9BWW4 388 aaPredicted RBP11.39□□□□□ -0.59
UBE3B-210ENST00000539599 RNF114Q9Y508 228 aa11.39□□□□□ -0.59
UBE3B-210ENST00000539599 H3BTX0 84 aa11.39□□□□□ -0.59
UBE3B-210ENST00000539599 CNTFRP26992 372 aa11.39□□□□□ -0.59
UBE3B-210ENST00000539599 LCN2P80188 198 aa11.39□□□□□ -0.59
UBE3B-210ENST00000539599 FOXL1Q12952 345 aa11.39□□□□□ -0.59
UBE3B-210ENST00000539599 TMEM249Q2WGJ8 235 aa11.39□□□□□ -0.59
UBE3B-210ENST00000539599 OR10X1Q8NGY0 326 aa11.39□□□□□ -0.59
UBE3B-210ENST00000539599 TMEM18Q96B42 140 aa11.39□□□□□ -0.59
UBE3B-210ENST00000539599 MRPL18Q9H0U6 180 aaKnown RBP11.39□□□□□ -0.59
UBE3B-210ENST00000539599 RALYQ9UKM9 306 aaKnown RBP11.39□□□□□ -0.59
UBE3B-210ENST00000539599 PTPRQQ9UMZ3 2332 aa11.39□□□□□ -0.59
UBE3B-210ENST00000539599 TCF15Q12870 199 aa11.39□□□□□ -0.59
UBE3B-210ENST00000539599 HCP5Q6MZN7 132 aa11.39□□□□□ -0.59
UBE3B-210ENST00000539599 TMEM108Q6UXF1 575 aa11.39□□□□□ -0.59
UBE3B-210ENST00000539599 LURAP1LQ8IV03 231 aa11.39□□□□□ -0.59
UBE3B-210ENST00000539599 MMD2Q8IY49 270 aa11.39□□□□□ -0.59
UBE3B-210ENST00000539599 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.39□□□□□ -0.59
UBE3B-210ENST00000539599 RNASEH2CQ8TDP1 164 aaKnown RBP11.39□□□□□ -0.59
UBE3B-210ENST00000539599 FAM168AQ92567 244 aa11.39□□□□□ -0.59
UBE3B-210ENST00000539599 ZNF714Q96N38 554 aa11.39□□□□□ -0.59
UBE3B-210ENST00000539599 COMMD5Q9GZQ3 224 aa11.39□□□□□ -0.59
UBE3B-210ENST00000539599 V9GYV3 84 aa11.39□□□□□ -0.59
UBE3B-210ENST00000539599 HELTA6NFD8 242 aa11.38□□□□□ -0.59
UBE3B-210ENST00000539599 C16orf97H3BN30 126 aa11.38□□□□□ -0.59
UBE3B-210ENST00000539599 SLC25A17O43808 307 aa11.38□□□□□ -0.59
UBE3B-210ENST00000539599 MOSP00540 346 aa11.38□□□□□ -0.59
UBE3B-210ENST00000539599 GNG4P50150 75 aa11.38□□□□□ -0.59
UBE3B-210ENST00000539599 GSX1Q9H4S2 264 aaPredicted RBP11.38□□□□□ -0.59
UBE3B-210ENST00000539599 LINC00312Q9Y6C7 94 aa11.38□□□□□ -0.59
UBE3B-210ENST00000539599 A8MWP6 167 aa11.38□□□□□ -0.59
UBE3B-210ENST00000539599 SNURFLB1AK76 121 aa11.38□□□□□ -0.59
UBE3B-210ENST00000539599 ENSAO43768 121 aaKnown RBP11.38□□□□□ -0.59
UBE3B-210ENST00000539599 SERF1AO75920 110 aa11.38□□□□□ -0.59
UBE3B-210ENST00000539599 CD99P14209 185 aa11.38□□□□□ -0.59
UBE3B-210ENST00000539599 TEX36Q5VZQ5 186 aa11.38□□□□□ -0.59
UBE3B-210ENST00000539599 MRPL54Q6P161 138 aaKnown RBP11.38□□□□□ -0.59
UBE3B-210ENST00000539599 ZNF833PQ6ZTB9 187 aa11.38□□□□□ -0.59
UBE3B-210ENST00000539599 REC114Q7Z4M0 266 aa11.38□□□□□ -0.59
UBE3B-210ENST00000539599 NPIPB3Q92617 1050 aa11.38□□□□□ -0.59
UBE3B-210ENST00000539599 SERTAD4Q9NUC0 356 aa11.38□□□□□ -0.59
UBE3B-210ENST00000539599 IL36BQ9NZH7 164 aa11.38□□□□□ -0.59
UBE3B-210ENST00000539599 FCN1O00602 326 aa11.37□□□□□ -0.59
UBE3B-210ENST00000539599 ITGB1BP1O14713 200 aa11.37□□□□□ -0.59
UBE3B-210ENST00000539599 EREGO14944 169 aa11.37□□□□□ -0.59
UBE3B-210ENST00000539599 GATCO43716 136 aaKnown RBP11.37□□□□□ -0.59
UBE3B-210ENST00000539599 CDKN1AP38936 164 aa11.37□□□□□ -0.59
UBE3B-210ENST00000539599 RPL8P62917 257 aaKnown RBP11.37□□□□□ -0.59
UBE3B-210ENST00000539599 POU2AF1Q16633 256 aa11.37□□□□□ -0.59
UBE3B-210ENST00000539599 ADTRPQ96IZ2 230 aa11.37□□□□□ -0.59
UBE3B-210ENST00000539599 ZNF430Q9H8G1 570 aaPredicted RBP11.37□□□□□ -0.59
UBE3B-210ENST00000539599 CBLN4Q9NTU7 201 aa11.37□□□□□ -0.59
UBE3B-210ENST00000539599 GNG5P63218 68 aa11.37□□□□□ -0.59
UBE3B-210ENST00000539599 CD69Q07108 199 aa11.37□□□□□ -0.59
UBE3B-210ENST00000539599 FAM103A1Q9BTL3 118 aaKnown RBP11.37□□□□□ -0.59
UBE3B-210ENST00000539599 SLC25A2Q9BXI2 301 aa11.37□□□□□ -0.59
UBE3B-210ENST00000539599 NDUFA4L2Q9NRX3 87 aa11.37□□□□□ -0.59
UBE3B-210ENST00000539599 PPIAL4EA0A075B759 164 aa11.36□□□□□ -0.59
UBE3B-210ENST00000539599 NKX6-3A6NJ46 265 aa11.36□□□□□ -0.59
UBE3B-210ENST00000539599 PPIAL4DF5H284 164 aa11.36□□□□□ -0.59
UBE3B-210ENST00000539599 PPIAL4FP0DN26 164 aa11.36□□□□□ -0.59
UBE3B-210ENST00000539599 RAB4BP61018 213 aa11.36□□□□□ -0.59
UBE3B-210ENST00000539599 USF2Q15853 346 aaPredicted RBP11.36□□□□□ -0.59
UBE3B-210ENST00000539599 Q6ZWC4 215 aa11.36□□□□□ -0.59
UBE3B-210ENST00000539599 Q8NA96 180 aa11.36□□□□□ -0.59
UBE3B-210ENST00000539599 OR5AU1Q8NGC0 362 aa11.36□□□□□ -0.59
UBE3B-210ENST00000539599 FLYWCH2Q96CP2 140 aaKnown RBP11.36□□□□□ -0.59
UBE3B-210ENST00000539599 ATG101Q9BSB4 218 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms