RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 PSMB11A5LHX3 300 aa10.8□□□□□ -0.68
UBE3B-209ENST00000539584 APOA2P02652 100 aa10.8□□□□□ -0.68
UBE3B-209ENST00000539584 SRIP30626 198 aa10.8□□□□□ -0.68
UBE3B-209ENST00000539584 ZNF83P51522 516 aa10.8□□□□□ -0.68
UBE3B-209ENST00000539584 SUB1P53999 127 aaKnown RBP eCLIP10.8□□□□□ -0.68
UBE3B-209ENST00000539584 BPIFB3P59826 476 aa10.8□□□□□ -0.68
UBE3B-209ENST00000539584 FAM71F2Q6NXP2 309 aa10.8□□□□□ -0.68
UBE3B-209ENST00000539584 ZNF788Q6ZQV5 615 aa10.8□□□□□ -0.68
UBE3B-209ENST00000539584 ZNF833PQ6ZTB9 187 aa10.8□□□□□ -0.68
UBE3B-209ENST00000539584 ATP5L2Q7Z4Y8 100 aa10.8□□□□□ -0.68
UBE3B-209ENST00000539584 PIP4P2Q8N4L2 257 aa10.8□□□□□ -0.68
UBE3B-209ENST00000539584 FDCSPQ8NFU4 85 aa10.8□□□□□ -0.68
UBE3B-209ENST00000539584 STXBP6Q8NFX7 210 aa10.8□□□□□ -0.68
UBE3B-209ENST00000539584 GRAMD2BQ96HH9 432 aa10.8□□□□□ -0.68
UBE3B-209ENST00000539584 LPAR2Q9HBW0 351 aa10.8□□□□□ -0.68
UBE3B-209ENST00000539584 NDUFA4L2Q9NRX3 87 aa10.8□□□□□ -0.68
UBE3B-209ENST00000539584 LINC00312Q9Y6C7 94 aa10.8□□□□□ -0.68
UBE3B-209ENST00000539584 FAM186AA6NE01 2351 aa10.8□□□□□ -0.68
UBE3B-209ENST00000539584 CACNA1GO43497 2377 aa10.8□□□□□ -0.68
UBE3B-209ENST00000539584 TET2Q6N021 2002 aaPredicted RBP10.8□□□□□ -0.68
UBE3B-209ENST00000539584 DPRXA6NFQ7 191 aa10.8□□□□□ -0.68
UBE3B-209ENST00000539584 F2Z2F3 143 aa10.8□□□□□ -0.68
UBE3B-209ENST00000539584 MGST1P10620 155 aaKnown RBP10.8□□□□□ -0.68
UBE3B-209ENST00000539584 USF1P22415 310 aaPredicted RBP10.8□□□□□ -0.68
UBE3B-209ENST00000539584 CCL11P51671 97 aa10.8□□□□□ -0.68
UBE3B-209ENST00000539584 MEF2CQ06413 473 aaPredicted RBP10.8□□□□□ -0.68
UBE3B-209ENST00000539584 KLF5Q13887 457 aaPredicted RBP10.8□□□□□ -0.68
UBE3B-209ENST00000539584 MSMPQ1L6U9 139 aa10.8□□□□□ -0.68
UBE3B-209ENST00000539584 SPATA45Q537H7 98 aa10.8□□□□□ -0.68
UBE3B-209ENST00000539584 LEAP2Q969E1 77 aa10.8□□□□□ -0.68
UBE3B-209ENST00000539584 FAM167A-AS1Q96KT0 104 aa10.8□□□□□ -0.68
UBE3B-209ENST00000539584 GAL3ST2Q9H3Q3 398 aa10.8□□□□□ -0.68
UBE3B-209ENST00000539584 ZFP30Q9Y2G7 519 aa10.8□□□□□ -0.68
UBE3B-209ENST00000539584 SPRY3O43610 288 aa10.79□□□□□ -0.68
UBE3B-209ENST00000539584 HIST1H1EP10412 219 aaKnown RBP10.79□□□□□ -0.68
UBE3B-209ENST00000539584 UBE2L3P68036 154 aaKnown RBP10.79□□□□□ -0.68
UBE3B-209ENST00000539584 TMEM177Q53S58 311 aa10.79□□□□□ -0.68
UBE3B-209ENST00000539584 TEX36Q5VZQ5 186 aa10.79□□□□□ -0.68
UBE3B-209ENST00000539584 CYB5R2Q6BCY4 276 aa10.79□□□□□ -0.68
UBE3B-209ENST00000539584 MBD6Q96DN6 1003 aa10.79□□□□□ -0.68
UBE3B-209ENST00000539584 GAFA1Q96PS6 74 aa10.79□□□□□ -0.68
UBE3B-209ENST00000539584 FAM103A1Q9BTL3 118 aaKnown RBP10.79□□□□□ -0.68
UBE3B-209ENST00000539584 SAP30LQ9HAJ7 183 aa10.79□□□□□ -0.68
UBE3B-209ENST00000539584 SERTAD4Q9NUC0 356 aa10.79□□□□□ -0.68
UBE3B-209ENST00000539584 AMMECR1Q9Y4X0 333 aaPredicted RBP10.79□□□□□ -0.68
UBE3B-209ENST00000539584 SRRM4A7MD48 611 aaKnown RBP10.79□□□□□ -0.68
UBE3B-209ENST00000539584 M0R1B8 84 aa10.79□□□□□ -0.68
UBE3B-209ENST00000539584 FRMD6-AS1P0C7T7 363 aa10.79□□□□□ -0.68
UBE3B-209ENST00000539584 SAA1P0DJI8 122 aaPredicted RBP10.79□□□□□ -0.68
UBE3B-209ENST00000539584 IGLC2P0DOY2 106 aa10.79□□□□□ -0.68
UBE3B-209ENST00000539584 IGLC3P0DOY3 106 aa10.79□□□□□ -0.68
UBE3B-209ENST00000539584 BTF3P20290 206 aaKnown RBP10.79□□□□□ -0.68
UBE3B-209ENST00000539584 CASP6P55212 293 aa10.79□□□□□ -0.68
UBE3B-209ENST00000539584 RPL8P62917 257 aaKnown RBP10.79□□□□□ -0.68
UBE3B-209ENST00000539584 TNFAIP6P98066 277 aaPredicted RBP10.79□□□□□ -0.68
UBE3B-209ENST00000539584 TBR1Q16650 682 aa10.79□□□□□ -0.68
UBE3B-209ENST00000539584 TSKUQ8WUA8 353 aa10.79□□□□□ -0.68
UBE3B-209ENST00000539584 TMEM190Q8WZ59 177 aa10.79□□□□□ -0.68
UBE3B-209ENST00000539584 SLC25A2Q9BXI2 301 aa10.79□□□□□ -0.68
UBE3B-209ENST00000539584 OR2J3O76001 311 aa10.78□□□□□ -0.68
UBE3B-209ENST00000539584 IGKV1-16P04430 117 aa10.78□□□□□ -0.68
UBE3B-209ENST00000539584 FXYD3Q14802 87 aa10.78□□□□□ -0.68
UBE3B-209ENST00000539584 OR5AN1Q8NGI8 311 aa10.78□□□□□ -0.68
UBE3B-209ENST00000539584 OR9G1Q8NH87 305 aa10.78□□□□□ -0.68
UBE3B-209ENST00000539584 COX7A2P2O60397 106 aa10.77□□□□□ -0.68
UBE3B-209ENST00000539584 C3orf79P0CE67 100 aa10.77□□□□□ -0.68
UBE3B-209ENST00000539584 PMCHP20382 165 aa10.77□□□□□ -0.68
UBE3B-209ENST00000539584 C10orf113Q5VZT2 155 aa10.77□□□□□ -0.68
UBE3B-209ENST00000539584 MRPL54Q6P161 138 aaKnown RBP10.77□□□□□ -0.68
UBE3B-209ENST00000539584 NIT1Q86X76 327 aa10.77□□□□□ -0.68
UBE3B-209ENST00000539584 C8orf31Q8N9H6 132 aa10.77□□□□□ -0.68
UBE3B-209ENST00000539584 THAP8Q8NA92 274 aa10.77□□□□□ -0.68
UBE3B-209ENST00000539584 TMEM167AQ8TBQ9 72 aa10.77□□□□□ -0.68
UBE3B-209ENST00000539584 C18orf32Q8TCD1 76 aa10.77□□□□□ -0.68
UBE3B-209ENST00000539584 RBM14Q96PK6 669 aaKnown RBP10.77□□□□□ -0.68
UBE3B-209ENST00000539584 PAXXQ9BUH6 204 aa10.77□□□□□ -0.68
UBE3B-209ENST00000539584 ZNF430Q9H8G1 570 aaPredicted RBP10.77□□□□□ -0.68
UBE3B-209ENST00000539584 MRPS16Q9Y3D3 137 aaKnown RBP10.77□□□□□ -0.68
UBE3B-209ENST00000539584 SOX21Q9Y651 276 aaPredicted RBP10.77□□□□□ -0.68
UBE3B-209ENST00000539584 TCRBV4S1A1TA0A5B7 111 aa10.77□□□□□ -0.69
UBE3B-209ENST00000539584 PEX7O00628 323 aa10.77□□□□□ -0.69
UBE3B-209ENST00000539584 MYOD1P15172 320 aa10.77□□□□□ -0.69
UBE3B-209ENST00000539584 GNG10P50151 68 aa10.77□□□□□ -0.69
UBE3B-209ENST00000539584 RELQ04864 619 aaPredicted RBP10.77□□□□□ -0.69
UBE3B-209ENST00000539584 UTF1Q5T230 341 aa10.77□□□□□ -0.69
UBE3B-209ENST00000539584 DMRTA1Q5VZB9 504 aa10.77□□□□□ -0.69
UBE3B-209ENST00000539584 PDPNQ86YL7 162 aa10.77□□□□□ -0.69
UBE3B-209ENST00000539584 OR4C13Q8NGP0 309 aa10.77□□□□□ -0.69
UBE3B-209ENST00000539584 FLYWCH2Q96CP2 140 aaKnown RBP10.77□□□□□ -0.69
UBE3B-209ENST00000539584 HARBI1Q96MB7 349 aa10.77□□□□□ -0.69
UBE3B-209ENST00000539584 GUCD1Q96NT3 240 aa10.77□□□□□ -0.69
UBE3B-209ENST00000539584 RCHY1Q96PM5 261 aa10.77□□□□□ -0.69
UBE3B-209ENST00000539584 NKX6-3A6NJ46 265 aa10.76□□□□□ -0.69
UBE3B-209ENST00000539584 SPINK4O60575 86 aa10.76□□□□□ -0.69
UBE3B-209ENST00000539584 GATA2P23769 480 aaPredicted RBP10.76□□□□□ -0.69
UBE3B-209ENST00000539584 CA7P43166 264 aa10.76□□□□□ -0.69
UBE3B-209ENST00000539584 TCL1AP56279 114 aa10.76□□□□□ -0.69
UBE3B-209ENST00000539584 KIAA1644Q3SXP7 199 aa10.76□□□□□ -0.69
UBE3B-209ENST00000539584 SPRNQ5BIV9 151 aa10.76□□□□□ -0.69
UBE3B-209ENST00000539584 ETFRF1Q6IPR1 90 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms