RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 TMEM65Q6PI78 240 aa18.31■□□□□ 0.52
TMEM260-202ENST00000538838 COMMD1Q8N668 190 aa18.31■□□□□ 0.52
TMEM260-202ENST00000538838 C11orf44Q8N8P7 122 aa18.31■□□□□ 0.52
TMEM260-202ENST00000538838 OR4X2Q8NGF9 303 aa18.31■□□□□ 0.52
TMEM260-202ENST00000538838 WFDC12Q8WWY7 111 aa18.31■□□□□ 0.52
TMEM260-202ENST00000538838 E5RGE8 158 aa18.3■□□□□ 0.52
TMEM260-202ENST00000538838 BRI3O95415 125 aa18.3■□□□□ 0.52
TMEM260-202ENST00000538838 HIST1H1BP16401 226 aaKnown RBP18.3■□□□□ 0.52
TMEM260-202ENST00000538838 RAB9AP51151 201 aa18.3■□□□□ 0.52
TMEM260-202ENST00000538838 KRTAP10-3P60369 221 aa18.3■□□□□ 0.52
TMEM260-202ENST00000538838 RPP30P78346 268 aaKnown RBP18.3■□□□□ 0.52
TMEM260-202ENST00000538838 KLK9Q2XQG4 91 aa18.3■□□□□ 0.52
TMEM260-202ENST00000538838 PVRIGQ6DKI7 326 aa18.3■□□□□ 0.52
TMEM260-202ENST00000538838 OR1L6Q8NGR2 347 aa18.3■□□□□ 0.52
TMEM260-202ENST00000538838 THAP6Q8TBB0 222 aa18.3■□□□□ 0.52
TMEM260-202ENST00000538838 PINX1Q96BK5 328 aaKnown RBP18.3■□□□□ 0.52
TMEM260-202ENST00000538838 SLA2Q9H6Q3 261 aa18.3■□□□□ 0.52
TMEM260-202ENST00000538838 LYRM2Q9NU23 88 aaPredicted RBP18.3■□□□□ 0.52
TMEM260-202ENST00000538838 FBXL7Q9UJT9 491 aa18.3■□□□□ 0.52
TMEM260-202ENST00000538838 KLK9Q9UKQ9 250 aa18.3■□□□□ 0.52
TMEM260-202ENST00000538838 FAM24AA6NFZ4 105 aa18.29■□□□□ 0.52
TMEM260-202ENST00000538838 CYB5BO43169 146 aa18.29■□□□□ 0.52
TMEM260-202ENST00000538838 NDUFB8O95169 186 aa18.29■□□□□ 0.52
TMEM260-202ENST00000538838 OR8U8P0C7N1 319 aa18.29■□□□□ 0.52
TMEM260-202ENST00000538838 CD28P10747 220 aa18.29■□□□□ 0.52
TMEM260-202ENST00000538838 CD300CQ08708 224 aa18.29■□□□□ 0.52
TMEM260-202ENST00000538838 RNF152Q8N8N0 203 aa18.29■□□□□ 0.52
TMEM260-202ENST00000538838 DCUN1D4Q92564 292 aa18.29■□□□□ 0.52
TMEM260-202ENST00000538838 IGHV3-21A0A0B4J1V1 117 aa18.28■□□□□ 0.52
TMEM260-202ENST00000538838 METTL15P1P0C7V9 234 aa18.28■□□□□ 0.52
TMEM260-202ENST00000538838 LYL1P12980 280 aa18.28■□□□□ 0.52
TMEM260-202ENST00000538838 TMEM14EPQ6UXP3 125 aa18.28■□□□□ 0.52
TMEM260-202ENST00000538838 IGSF23A1L1A6 192 aa18.27■□□□□ 0.52
TMEM260-202ENST00000538838 IFNA4P05014 189 aa18.27■□□□□ 0.52
TMEM260-202ENST00000538838 RAB11AP62491 216 aa18.27■□□□□ 0.52
TMEM260-202ENST00000538838 NOXA1Q86UR1 476 aa18.27■□□□□ 0.52
TMEM260-202ENST00000538838 NECAP1Q8NC96 275 aa18.27■□□□□ 0.52
TMEM260-202ENST00000538838 MYOZ3Q8TDC0 251 aa18.27■□□□□ 0.52
TMEM260-202ENST00000538838 S4R3C0 116 aa18.27■□□□□ 0.52
TMEM260-202ENST00000538838 FAM223BA6NKX1 122 aa18.27■□□□□ 0.51
TMEM260-202ENST00000538838 P2RY1P47900 373 aa18.27■□□□□ 0.51
TMEM260-202ENST00000538838 ATP5IP56385 69 aaPredicted RBP18.27■□□□□ 0.51
TMEM260-202ENST00000538838 C15orf32Q32M92 178 aa18.27■□□□□ 0.51
TMEM260-202ENST00000538838 KHDC1LQ5JSQ8 128 aa18.27■□□□□ 0.51
TMEM260-202ENST00000538838 ETV3LQ6ZN32 361 aa18.27■□□□□ 0.51
TMEM260-202ENST00000538838 FAM223AQ8IWN6 122 aa18.27■□□□□ 0.51
TMEM260-202ENST00000538838 THYN1Q9P016 225 aa18.27■□□□□ 0.51
TMEM260-202ENST00000538838 FXYD6-FXYD2A0A087WZ82 144 aa18.26■□□□□ 0.51
TMEM260-202ENST00000538838 MFSD2BA6NFX1 497 aa18.26■□□□□ 0.51
TMEM260-202ENST00000538838 K7EIM0 57 aa18.26■□□□□ 0.51
TMEM260-202ENST00000538838 CORTO00230 105 aa18.26■□□□□ 0.51
TMEM260-202ENST00000538838 MT-CO2P00403 227 aa18.26■□□□□ 0.51
TMEM260-202ENST00000538838 IGHV3-48P01763 117 aa18.26■□□□□ 0.51
TMEM260-202ENST00000538838 OPRK1P41145 380 aa18.26■□□□□ 0.51
TMEM260-202ENST00000538838 RIPPLY3P57055 190 aa18.26■□□□□ 0.51
TMEM260-202ENST00000538838 KIAA0141Q14154 515 aaPredicted RBP18.26■□□□□ 0.51
TMEM260-202ENST00000538838 OR8G2PQ6IF36 304 aa18.26■□□□□ 0.51
TMEM260-202ENST00000538838 TCTE3Q8IZS6 198 aa18.26■□□□□ 0.51
TMEM260-202ENST00000538838 TMEM252Q8N6L7 170 aa18.26■□□□□ 0.51
TMEM260-202ENST00000538838 RNASEH2CQ8TDP1 164 aaKnown RBP18.26■□□□□ 0.51
TMEM260-202ENST00000538838 NEURL2Q9BR09 285 aa18.26■□□□□ 0.51
TMEM260-202ENST00000538838 FNDC4Q9H6D8 234 aaPredicted RBP18.26■□□□□ 0.51
TMEM260-202ENST00000538838 PMS2P5A8MQ11 134 aa18.25■□□□□ 0.51
TMEM260-202ENST00000538838 I3L2K1 104 aa18.25■□□□□ 0.51
TMEM260-202ENST00000538838 HAPLN4Q86UW8 402 aa18.25■□□□□ 0.51
TMEM260-202ENST00000538838 PRSS46E5RG02 174 aa18.24■□□□□ 0.51
TMEM260-202ENST00000538838 CST7O76096 145 aa18.24■□□□□ 0.51
TMEM260-202ENST00000538838 IGHV3-11P01762 117 aa18.24■□□□□ 0.51
TMEM260-202ENST00000538838 IGHV3-23P01764 117 aa18.24■□□□□ 0.51
TMEM260-202ENST00000538838 SLC25A4P12235 298 aa18.24■□□□□ 0.51
TMEM260-202ENST00000538838 EXOSC2Q13868 293 aaKnown RBP18.24■□□□□ 0.51
TMEM260-202ENST00000538838 MLANAQ16655 118 aa18.24■□□□□ 0.51
TMEM260-202ENST00000538838 ZNF491Q8N8L2 437 aa18.24■□□□□ 0.51
TMEM260-202ENST00000538838 CITED2Q99967 270 aaPredicted RBP18.24■□□□□ 0.51
TMEM260-202ENST00000538838 TCRBV4S1A1TA0A5B7 111 aa18.23■□□□□ 0.51
TMEM260-202ENST00000538838 ATP5G2Q06055 141 aa18.23■□□□□ 0.51
TMEM260-202ENST00000538838 ARL16Q0P5N6 197 aa18.23■□□□□ 0.51
TMEM260-202ENST00000538838 EWSR1Q01844 656 aaKnown RBP eCLIP18.23■□□□□ 0.51
TMEM260-202ENST00000538838 SCARB1Q8WTV0 552 aa18.23■□□□□ 0.51
TMEM260-202ENST00000538838 USMG5Q96IX5 58 aa18.23■□□□□ 0.51
TMEM260-202ENST00000538838 OR5B12Q96R08 314 aa18.23■□□□□ 0.51
TMEM260-202ENST00000538838 GNB4Q9HAV0 340 aa18.23■□□□□ 0.51
TMEM260-202ENST00000538838 A0A0G2JLM5 398 aa18.22■□□□□ 0.51
TMEM260-202ENST00000538838 RPL12P30050 165 aaKnown RBP18.22■□□□□ 0.51
TMEM260-202ENST00000538838 SULT1A1P50225 295 aa18.22■□□□□ 0.51
TMEM260-202ENST00000538838 CD69Q07108 199 aa18.22■□□□□ 0.51
TMEM260-202ENST00000538838 C18orf65Q6ZTR6 163 aa18.22■□□□□ 0.51
TMEM260-202ENST00000538838 SLC16A13Q7RTY0 426 aa18.22■□□□□ 0.51
TMEM260-202ENST00000538838 STX12Q86Y82 276 aa18.22■□□□□ 0.51
TMEM260-202ENST00000538838 TMEM217Q8N7C4 229 aa18.22■□□□□ 0.51
TMEM260-202ENST00000538838 OR11H4Q8NGC9 324 aa18.22■□□□□ 0.51
TMEM260-202ENST00000538838 SLC25A31Q9H0C2 315 aa18.22■□□□□ 0.51
TMEM260-202ENST00000538838 MRPL36Q9P0J6 103 aaKnown RBP18.22■□□□□ 0.51
TMEM260-202ENST00000538838 COL6A5A8TX70 2615 aa18.22■□□□□ 0.51
TMEM260-202ENST00000538838 ACOT7LQ6ZUV0 252 aa18.21■□□□□ 0.51
TMEM260-202ENST00000538838 ZNF546Q86UE3 836 aa18.21■□□□□ 0.51
TMEM260-202ENST00000538838 CXorf58Q96LI9 332 aa18.21■□□□□ 0.51
TMEM260-202ENST00000538838 UBE2E2Q96LR5 201 aa18.21■□□□□ 0.51
TMEM260-202ENST00000538838 RPS10-NUDT3A0A1W2PQS6 291 aa18.2■□□□□ 0.5
TMEM260-202ENST00000538838 A0A1W2PRX2 142 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms