RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 GBGT1Q8N5D6 347 aa6.22□□□□□ -1.41
USP28-203ENST00000537490 OR4A16Q8NH70 328 aa6.22□□□□□ -1.41
USP28-203ENST00000537490 MRGPRFQ96AM1 343 aa6.22□□□□□ -1.41
USP28-203ENST00000537490 TXN2Q99757 166 aa6.22□□□□□ -1.41
USP28-203ENST00000537490 NXF2Q9GZY0 626 aaKnown RBP6.22□□□□□ -1.41
USP28-203ENST00000537490 CSTL1Q9H114 145 aa6.22□□□□□ -1.41
USP28-203ENST00000537490 FAM212BQ9NTI7 297 aaPredicted RBP6.22□□□□□ -1.41
USP28-203ENST00000537490 COMMD3Q9UBI1 195 aa6.22□□□□□ -1.41
USP28-203ENST00000537490 MPTX1A8MV57 137 aa6.21□□□□□ -1.42
USP28-203ENST00000537490 APOHP02749 345 aaPredicted RBP6.21□□□□□ -1.42
USP28-203ENST00000537490 ELK1P19419 428 aa6.21□□□□□ -1.42
USP28-203ENST00000537490 S100GP29377 79 aa6.21□□□□□ -1.42
USP28-203ENST00000537490 CMC4P56277 68 aaPredicted RBP6.21□□□□□ -1.42
USP28-203ENST00000537490 NCS1P62166 190 aa6.21□□□□□ -1.42
USP28-203ENST00000537490 TOMM20LQ6UXN7 152 aa6.21□□□□□ -1.42
USP28-203ENST00000537490 TCF24Q7RTU0 167 aa6.21□□□□□ -1.42
USP28-203ENST00000537490 ZNF114Q8NC26 417 aa6.21□□□□□ -1.42
USP28-203ENST00000537490 PHLDA1Q8WV24 401 aaPredicted RBP6.21□□□□□ -1.42
USP28-203ENST00000537490 PINX1Q96BK5 328 aaKnown RBP6.21□□□□□ -1.42
USP28-203ENST00000537490 SCPEP1Q9HB40 452 aa6.21□□□□□ -1.42
USP28-203ENST00000537490 KLK5Q9Y337 293 aaPredicted RBP6.21□□□□□ -1.42
USP28-203ENST00000537490 A0A087WXM4 84 aa6.2□□□□□ -1.42
USP28-203ENST00000537490 IGHV3-66A0A0C4DH42 116 aa6.2□□□□□ -1.42
USP28-203ENST00000537490 SMIM31A0A1B0GVY4 71 aa6.2□□□□□ -1.42
USP28-203ENST00000537490 M0QYG6 137 aa6.2□□□□□ -1.42
USP28-203ENST00000537490 GNG7O60262 68 aa6.2□□□□□ -1.42
USP28-203ENST00000537490 HPGDSO60760 199 aa6.2□□□□□ -1.42
USP28-203ENST00000537490 IGKV1-5P01602 117 aa6.2□□□□□ -1.42
USP28-203ENST00000537490 APOA1P02647 267 aa6.2□□□□□ -1.42
USP28-203ENST00000537490 PI3P19957 117 aa6.2□□□□□ -1.42
USP28-203ENST00000537490 RCVRNP35243 200 aa6.2□□□□□ -1.42
USP28-203ENST00000537490 VBP1P61758 197 aa6.2□□□□□ -1.42
USP28-203ENST00000537490 ERHP84090 104 aaKnown RBP6.2□□□□□ -1.42
USP28-203ENST00000537490 RNASE12Q5GAN4 147 aaKnown RBP6.2□□□□□ -1.42
USP28-203ENST00000537490 RPP25LQ8N5L8 163 aaKnown RBP6.2□□□□□ -1.42
USP28-203ENST00000537490 TMEM217Q8N7C4 229 aa6.2□□□□□ -1.42
USP28-203ENST00000537490 ST8SIA2Q92186 375 aa6.2□□□□□ -1.42
USP28-203ENST00000537490 CMTM3Q96MX0 182 aa6.2□□□□□ -1.42
USP28-203ENST00000537490 RARRES2Q99969 163 aa6.2□□□□□ -1.42
USP28-203ENST00000537490 C6orf62Q9GZU0 229 aaPredicted RBP6.2□□□□□ -1.42
USP28-203ENST00000537490 VSIRQ9H7M9 311 aa6.2□□□□□ -1.42
USP28-203ENST00000537490 A0A0B4J293 547 aa6.19□□□□□ -1.42
USP28-203ENST00000537490 A0A1B0GU03 582 aa6.19□□□□□ -1.42
USP28-203ENST00000537490 ST8SIA3O43173 380 aa6.19□□□□□ -1.42
USP28-203ENST00000537490 DEDDO75618 318 aa6.19□□□□□ -1.42
USP28-203ENST00000537490 DFFBO76075 338 aa6.19□□□□□ -1.42
USP28-203ENST00000537490 TMEM50AO95807 157 aa6.19□□□□□ -1.42
USP28-203ENST00000537490 P0C879 139 aa6.19□□□□□ -1.42
USP28-203ENST00000537490 NPBWR1P48145 328 aa6.19□□□□□ -1.42
USP28-203ENST00000537490 DEFB131AP59861 70 aa6.19□□□□□ -1.42
USP28-203ENST00000537490 NANOS2P60321 138 aaKnown RBP6.19□□□□□ -1.42
USP28-203ENST00000537490 RND3P61587 244 aa6.19□□□□□ -1.42
USP28-203ENST00000537490 PAFAH1B2P68402 229 aa6.19□□□□□ -1.42
USP28-203ENST00000537490 MLANAQ16655 118 aa6.19□□□□□ -1.42
USP28-203ENST00000537490 LEMD1Q68G75 181 aa6.19□□□□□ -1.42
USP28-203ENST00000537490 PVRIGQ6DKI7 326 aa6.19□□□□□ -1.42
USP28-203ENST00000537490 FAM24BQ8N5W8 94 aa6.19□□□□□ -1.42
USP28-203ENST00000537490 DUSP18Q8NEJ0 188 aa6.19□□□□□ -1.42
USP28-203ENST00000537490 OR11H2Q8NH07 326 aa6.19□□□□□ -1.42
USP28-203ENST00000537490 GATAD1Q8WUU5 269 aa6.19□□□□□ -1.42
USP28-203ENST00000537490 TP53RKQ96S44 253 aa6.19□□□□□ -1.42
USP28-203ENST00000537490 FUNDC2Q9BWH2 189 aa6.19□□□□□ -1.42
USP28-203ENST00000537490 MS4A6AQ9H2W1 248 aa6.19□□□□□ -1.42
USP28-203ENST00000537490 ZFAND3Q9H8U3 227 aa6.19□□□□□ -1.42
USP28-203ENST00000537490 VCX3AQ9NNX9 186 aa6.19□□□□□ -1.42
USP28-203ENST00000537490 MRPL36Q9P0J6 103 aaKnown RBP6.19□□□□□ -1.42
USP28-203ENST00000537490 KLK11Q9UBX7 282 aa6.19□□□□□ -1.42
USP28-203ENST00000537490 PUS1Q9Y606 427 aaKnown RBP eCLIP6.19□□□□□ -1.42
USP28-203ENST00000537490 A0A0G2JRQ6 117 aa6.18□□□□□ -1.42
USP28-203ENST00000537490 INS-IGF2F8WCM5 200 aa6.18□□□□□ -1.42
USP28-203ENST00000537490 DNASE2O00115 360 aaPredicted RBP6.18□□□□□ -1.42
USP28-203ENST00000537490 DEFB4AO15263 64 aa6.18□□□□□ -1.42
USP28-203ENST00000537490 CA1P00915 261 aaPredicted RBP6.18□□□□□ -1.42
USP28-203ENST00000537490 RNASE2P10153 161 aaKnown RBP6.18□□□□□ -1.42
USP28-203ENST00000537490 PGAM2P15259 253 aa6.18□□□□□ -1.42
USP28-203ENST00000537490 ETV6P41212 452 aa6.18□□□□□ -1.42
USP28-203ENST00000537490 PIGPP57054 158 aa6.18□□□□□ -1.42
USP28-203ENST00000537490 SP6Q3SY56 376 aa6.18□□□□□ -1.42
USP28-203ENST00000537490 LGALS9CQ6DKI2 356 aa6.18□□□□□ -1.42
USP28-203ENST00000537490 ZNF600Q6ZNG1 722 aa6.18□□□□□ -1.42
USP28-203ENST00000537490 LHFPL1Q86WI0 220 aa6.18□□□□□ -1.42
USP28-203ENST00000537490 OR52I2Q8NH67 350 aa6.18□□□□□ -1.42
USP28-203ENST00000537490 C11orf45Q8TAV5 145 aa6.18□□□□□ -1.42
USP28-203ENST00000537490 GINS3Q9BRX5 216 aa6.18□□□□□ -1.42
USP28-203ENST00000537490 FNDC4Q9H6D8 234 aaPredicted RBP6.18□□□□□ -1.42
USP28-203ENST00000537490 FBXL17Q9UF56 701 aa6.18□□□□□ -1.42
USP28-203ENST00000537490 TRAV2A0A0B4J234 112 aa6.17□□□□□ -1.42
USP28-203ENST00000537490 C3orf85A0A1B0GTC6 90 aa6.17□□□□□ -1.42
USP28-203ENST00000537490 FAM25AB3EWG3 89 aa6.17□□□□□ -1.42
USP28-203ENST00000537490 FAM25CB3EWG5 89 aa6.17□□□□□ -1.42
USP28-203ENST00000537490 FAM25GB3EWG6 89 aa6.17□□□□□ -1.42
USP28-203ENST00000537490 TNFAIP8O95379 198 aa6.17□□□□□ -1.42
USP28-203ENST00000537490 IFNA17P01571 189 aa6.17□□□□□ -1.42
USP28-203ENST00000537490 CD3DP04234 171 aa6.17□□□□□ -1.42
USP28-203ENST00000537490 CD5P06127 495 aa6.17□□□□□ -1.42
USP28-203ENST00000537490 GIG44P09565 113 aaPredicted RBP6.17□□□□□ -1.42
USP28-203ENST00000537490 SNCAP37840 140 aa6.17□□□□□ -1.42
USP28-203ENST00000537490 RORCP51449 518 aa6.17□□□□□ -1.42
USP28-203ENST00000537490 AKR1C2P52895 323 aa6.17□□□□□ -1.42
USP28-203ENST00000537490 PPP5CP53041 499 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms