RNA–Protein interactions for RNA: ENST00000536461.5

KDM4B-203, Transcript of lysine demethylase 4B, humanhuman

TSL 1 (best) BASIC

Gene KDM4B, Length 5,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-203ENST00000536461 MBD3L3A6NE82 208 aaPredicted RBP13.53□□□□□ -0.24
KDM4B-203ENST00000536461 MBD3L5A6NJ08 208 aaPredicted RBP13.53□□□□□ -0.24
KDM4B-203ENST00000536461 RRHO14718 337 aa13.53□□□□□ -0.24
KDM4B-203ENST00000536461 ZNF841Q6ZN19 808 aa13.53□□□□□ -0.24
KDM4B-203ENST00000536461 PIP4P1Q86T03 277 aa13.53□□□□□ -0.24
KDM4B-203ENST00000536461 MBD3L2Q8NHZ7 208 aaPredicted RBP13.53□□□□□ -0.24
KDM4B-203ENST00000536461 TMEM242Q9NWH2 141 aa13.53□□□□□ -0.24
KDM4B-203ENST00000536461 VWA8A3KMH1 1905 aa13.53□□□□□ -0.24
KDM4B-203ENST00000536461 IGKV1-9A0A0C4DH69 117 aa13.52□□□□□ -0.24
KDM4B-203ENST00000536461 IGHG3P01860 377 aa13.52□□□□□ -0.24
KDM4B-203ENST00000536461 DLX1P56177 255 aa13.52□□□□□ -0.24
KDM4B-203ENST00000536461 OR13A1Q8NGR1 328 aa13.52□□□□□ -0.24
KDM4B-203ENST00000536461 NRN1Q9NPD7 142 aa13.52□□□□□ -0.24
KDM4B-203ENST00000536461 A0A0G2JLM5 398 aa13.52□□□□□ -0.24
KDM4B-203ENST00000536461 FCGR2BP31994 310 aaPredicted RBP13.52□□□□□ -0.24
KDM4B-203ENST00000536461 SRSF7Q16629 238 aaKnown RBP eCLIP13.52□□□□□ -0.24
KDM4B-203ENST00000536461 CACNG8Q8WXS5 425 aa13.52□□□□□ -0.24
KDM4B-203ENST00000536461 NEU1Q99519 415 aa13.52□□□□□ -0.24
KDM4B-203ENST00000536461 SNRNP200O75643 2136 aaKnown RBP13.52□□□□□ -0.25
KDM4B-203ENST00000536461 CRYGSP22914 178 aa13.52□□□□□ -0.25
KDM4B-203ENST00000536461 FOXA3P55318 350 aaPredicted RBP13.52□□□□□ -0.25
KDM4B-203ENST00000536461 DDB2Q92466 427 aa13.52□□□□□ -0.25
KDM4B-203ENST00000536461 F11RQ9Y624 299 aaKnown RBP13.52□□□□□ -0.25
KDM4B-203ENST00000536461 LOC107984156A0A0G2JMH3 177 aa13.52□□□□□ -0.25
KDM4B-203ENST00000536461 IL6RP08887 468 aaPredicted RBP13.52□□□□□ -0.25
KDM4B-203ENST00000536461 HBBP68871 147 aa13.52□□□□□ -0.25
KDM4B-203ENST00000536461 ARL17AQ8IVW1 177 aa13.52□□□□□ -0.25
KDM4B-203ENST00000536461 NPIPB3Q92617 1050 aa13.52□□□□□ -0.25
KDM4B-203ENST00000536461 ST6GALNAC6Q969X2 333 aa13.52□□□□□ -0.25
KDM4B-203ENST00000536461 IFI27L2Q9H2X8 130 aa13.52□□□□□ -0.25
KDM4B-203ENST00000536461 MGPP08493 103 aa13.51□□□□□ -0.25
KDM4B-203ENST00000536461 RPL39P5Q59GN2 51 aa13.51□□□□□ -0.25
KDM4B-203ENST00000536461 ZNF324BQ6AW86 544 aaPredicted RBP13.51□□□□□ -0.25
KDM4B-203ENST00000536461 TMEM136Q6ZRR5 245 aa13.51□□□□□ -0.25
KDM4B-203ENST00000536461 TCF23Q7RTU1 214 aa13.51□□□□□ -0.25
KDM4B-203ENST00000536461 YPEL1O60688 119 aa13.51□□□□□ -0.25
KDM4B-203ENST00000536461 IGKV1D-33P01593 117 aa13.51□□□□□ -0.25
KDM4B-203ENST00000536461 IGKV1-33P01594 117 aa13.51□□□□□ -0.25
KDM4B-203ENST00000536461 RRN3P1Q2M238 152 aa13.51□□□□□ -0.25
KDM4B-203ENST00000536461 ZNF672Q499Z4 452 aaPredicted RBP13.51□□□□□ -0.25
KDM4B-203ENST00000536461 FAM19A2Q8N3H0 131 aa13.51□□□□□ -0.25
KDM4B-203ENST00000536461 LYZL4Q96KX0 146 aa13.51□□□□□ -0.25
KDM4B-203ENST00000536461 YPEL2Q96QA6 119 aa13.51□□□□□ -0.25
KDM4B-203ENST00000536461 GBF1Q92538 1859 aa13.51□□□□□ -0.25
KDM4B-203ENST00000536461 ADMP35318 185 aa13.51□□□□□ -0.25
KDM4B-203ENST00000536461 PLXNA3P51805 1871 aa13.51□□□□□ -0.25
KDM4B-203ENST00000536461 SYT8Q8NBV8 401 aa13.5□□□□□ -0.25
KDM4B-203ENST00000536461 RAX2Q96IS3 184 aa13.5□□□□□ -0.25
KDM4B-203ENST00000536461 A0A0A6YYD4 124 aa13.5□□□□□ -0.25
KDM4B-203ENST00000536461 A0A1B0GW64 132 aa13.5□□□□□ -0.25
KDM4B-203ENST00000536461 VKORC1L1Q8N0U8 176 aa13.5□□□□□ -0.25
KDM4B-203ENST00000536461 SRSF12Q8WXF0 261 aaKnown RBP13.5□□□□□ -0.25
KDM4B-203ENST00000536461 SGK494Q96LW2 274 aa13.5□□□□□ -0.25
KDM4B-203ENST00000536461 RBFOX2O43251 390 aaKnown RBP eCLIP13.5□□□□□ -0.252e-7■■■■□ 24.4
KDM4B-203ENST00000536461 SUPT4H1P63272 117 aaKnown RBP13.5□□□□□ -0.25
KDM4B-203ENST00000536461 C2orf88Q9BSF0 95 aa13.5□□□□□ -0.25
KDM4B-203ENST00000536461 PRSS22Q9GZN4 317 aa13.5□□□□□ -0.25
KDM4B-203ENST00000536461 EFNA2O43921 213 aa13.5□□□□□ -0.25
KDM4B-203ENST00000536461 NPPCP23582 126 aa13.5□□□□□ -0.25
KDM4B-203ENST00000536461 SRSF4Q08170 494 aaKnown RBP13.5□□□□□ -0.25
KDM4B-203ENST00000536461 BEND2Q8NDZ0 799 aa13.5□□□□□ -0.25
KDM4B-203ENST00000536461 RNASEH2CQ8TDP1 164 aaKnown RBP13.5□□□□□ -0.25
KDM4B-203ENST00000536461 MED12Q93074 2177 aa13.49□□□□□ -0.25
KDM4B-203ENST00000536461 A0A1B0GV72 72 aa13.49□□□□□ -0.25
KDM4B-203ENST00000536461 A6NNC1 897 aa13.49□□□□□ -0.25
KDM4B-203ENST00000536461 C17orf98A8MV24 154 aa13.49□□□□□ -0.25
KDM4B-203ENST00000536461 PROB1E7EW31 1015 aa13.49□□□□□ -0.25
KDM4B-203ENST00000536461 LHFPL1Q86WI0 220 aa13.49□□□□□ -0.25
KDM4B-203ENST00000536461 HIST1H4GQ99525 98 aa13.49□□□□□ -0.25
KDM4B-203ENST00000536461 CGAP01215 116 aa13.49□□□□□ -0.25
KDM4B-203ENST00000536461 ID3Q02535 119 aa13.49□□□□□ -0.25
KDM4B-203ENST00000536461 OR4D5Q8NGN0 318 aa13.49□□□□□ -0.25
KDM4B-203ENST00000536461 ZNF502Q8TBZ5 544 aa13.49□□□□□ -0.25
KDM4B-203ENST00000536461 DUX5Q96PT3 197 aa13.49□□□□□ -0.25
KDM4B-203ENST00000536461 IGHV3OR16-12A0A075B7B8 117 aa13.49□□□□□ -0.25
KDM4B-203ENST00000536461 LY6G6EA0A0G2JKS1 128 aa13.49□□□□□ -0.25
KDM4B-203ENST00000536461 SAPCD1Q5SSQ6 148 aa13.49□□□□□ -0.25
KDM4B-203ENST00000536461 FBXL15Q9H469 300 aa13.49□□□□□ -0.25
KDM4B-203ENST00000536461 U3KQA8 63 aa13.49□□□□□ -0.25
KDM4B-203ENST00000536461 DLEU1O43261 78 aa13.49□□□□□ -0.25
KDM4B-203ENST00000536461 ZNF497Q6ZNH5 498 aa13.49□□□□□ -0.25
KDM4B-203ENST00000536461 M0R3E3 92 aa13.48□□□□□ -0.25
KDM4B-203ENST00000536461 IGHV1-46P01743 117 aa13.48□□□□□ -0.25
KDM4B-203ENST00000536461 LRTM2Q8N967 370 aa13.48□□□□□ -0.25
KDM4B-203ENST00000536461 IGKV1D-8A0A087WSZ0 117 aa13.48□□□□□ -0.25
KDM4B-203ENST00000536461 ERASQ7Z444 233 aa13.48□□□□□ -0.25
KDM4B-203ENST00000536461 MBD3L1Q8WWY6 194 aa13.48□□□□□ -0.25
KDM4B-203ENST00000536461 CACNA1DQ01668 2161 aa13.48□□□□□ -0.25
KDM4B-203ENST00000536461 B4DSR2 109 aa13.48□□□□□ -0.25
KDM4B-203ENST00000536461 MOSP00540 346 aa13.48□□□□□ -0.25
KDM4B-203ENST00000536461 REG1AP05451 166 aa13.48□□□□□ -0.25
KDM4B-203ENST00000536461 PRR30Q53SZ7 412 aaPredicted RBP13.48□□□□□ -0.25
KDM4B-203ENST00000536461 FAM166AQ6J272 317 aa13.48□□□□□ -0.25
KDM4B-203ENST00000536461 ARL6IP6Q8N6S5 226 aa13.48□□□□□ -0.25
KDM4B-203ENST00000536461 MAP1LC3AQ9H492 121 aa13.48□□□□□ -0.25
KDM4B-203ENST00000536461 SMIM13P0DJ93 91 aa13.48□□□□□ -0.25
KDM4B-203ENST00000536461 FOXG1P55316 489 aaPredicted RBP13.48□□□□□ -0.25
KDM4B-203ENST00000536461 IGFL3Q6UXB1 125 aa13.48□□□□□ -0.25
KDM4B-203ENST00000536461 SLC25A15Q9Y619 301 aa13.48□□□□□ -0.25
KDM4B-203ENST00000536461 LDLRAD4O15165 306 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms