RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 LINC00315P59091 139 aa5.73□□□□□ -1.49
CLIP1-206ENST00000535290 SLC25A46Q96AG3 418 aa5.73□□□□□ -1.49
CLIP1-206ENST00000535290 CENPNQ96H22 339 aaPredicted RBP5.73□□□□□ -1.49
CLIP1-206ENST00000535290 C16orf92Q96LL3 132 aa5.73□□□□□ -1.49
CLIP1-206ENST00000535290 HSD17B10Q99714 261 aaKnown RBP5.73□□□□□ -1.49
CLIP1-206ENST00000535290 ZNF446Q9NWS9 450 aa5.73□□□□□ -1.49
CLIP1-206ENST00000535290 ZNF586Q9NXT0 402 aa5.73□□□□□ -1.49
CLIP1-206ENST00000535290 OR2W1Q9Y3N9 320 aa5.73□□□□□ -1.49
CLIP1-206ENST00000535290 PUS1Q9Y606 427 aaKnown RBP eCLIP5.73□□□□□ -1.49
CLIP1-206ENST00000535290 A0A1B0GU03 582 aa5.72□□□□□ -1.49
CLIP1-206ENST00000535290 LOC102723971A0A1B0GUV8 181 aa5.72□□□□□ -1.49
CLIP1-206ENST00000535290 SCO2A0A1W2PP80 73 aa5.72□□□□□ -1.49
CLIP1-206ENST00000535290 F5H768 121 aa5.72□□□□□ -1.49
CLIP1-206ENST00000535290 I3L2K1 104 aa5.72□□□□□ -1.49
CLIP1-206ENST00000535290 MFAP4P55083 255 aa5.72□□□□□ -1.49
CLIP1-206ENST00000535290 MRPS15P82914 257 aaKnown RBP5.72□□□□□ -1.49
CLIP1-206ENST00000535290 RCN1Q15293 331 aa5.72□□□□□ -1.49
CLIP1-206ENST00000535290 SSX1Q16384 188 aa5.72□□□□□ -1.49
CLIP1-206ENST00000535290 RBM48Q5RL73 367 aaKnown RBP5.72□□□□□ -1.49
CLIP1-206ENST00000535290 UHRF2Q96PU4 802 aa5.72□□□□□ -1.49
CLIP1-206ENST00000535290 HINT2Q9BX68 163 aa5.72□□□□□ -1.49
CLIP1-206ENST00000535290 TMEM140Q9NV12 185 aa5.72□□□□□ -1.49
CLIP1-206ENST00000535290 A0A1W2PPQ1 181 aa5.71□□□□□ -1.5
CLIP1-206ENST00000535290 HELTA6NFD8 242 aa5.71□□□□□ -1.5
CLIP1-206ENST00000535290 EI24O14681 340 aa5.71□□□□□ -1.5
CLIP1-206ENST00000535290 TNFSF12O43508 249 aa5.71□□□□□ -1.5
CLIP1-206ENST00000535290 WBP4O75554 376 aaKnown RBP5.71□□□□□ -1.5
CLIP1-206ENST00000535290 SLC22A5O76082 557 aa5.71□□□□□ -1.5
CLIP1-206ENST00000535290 IGKV3-20P01619 116 aa5.71□□□□□ -1.5
CLIP1-206ENST00000535290 DNAH10OSP0CZ25 163 aa5.71□□□□□ -1.5
CLIP1-206ENST00000535290 MYL12AP19105 171 aa5.71□□□□□ -1.5
CLIP1-206ENST00000535290 MAPK3P27361 379 aaPredicted RBP5.71□□□□□ -1.5
CLIP1-206ENST00000535290 GNRHRP30968 328 aa5.71□□□□□ -1.5
CLIP1-206ENST00000535290 P2RY1P47900 373 aa5.71□□□□□ -1.5
CLIP1-206ENST00000535290 DHRS2Q13268 280 aa5.71□□□□□ -1.5
CLIP1-206ENST00000535290 CLINT1Q14677 625 aa5.71□□□□□ -1.5
CLIP1-206ENST00000535290 POU2AF1Q16633 256 aa5.71□□□□□ -1.5
CLIP1-206ENST00000535290 ACSM3Q53FZ2 586 aa5.71□□□□□ -1.5
CLIP1-206ENST00000535290 TOR2AQ5JU69 321 aa5.71□□□□□ -1.5
CLIP1-206ENST00000535290 OGFRL1Q5TC84 451 aaPredicted RBP5.71□□□□□ -1.5
CLIP1-206ENST00000535290 THOC7Q6I9Y2 204 aaKnown RBP5.71□□□□□ -1.5
CLIP1-206ENST00000535290 HSD17B13Q7Z5P4 300 aaPredicted RBP5.71□□□□□ -1.5
CLIP1-206ENST00000535290 SPAG16Q8N0X2 631 aa5.71□□□□□ -1.5
CLIP1-206ENST00000535290 C1orf158Q8N1D5 194 aa5.71□□□□□ -1.5
CLIP1-206ENST00000535290 OR56B1Q8NGI3 324 aa5.71□□□□□ -1.5
CLIP1-206ENST00000535290 OR1L8Q8NGR8 309 aa5.71□□□□□ -1.5
CLIP1-206ENST00000535290 DEFB104AQ8WTQ1 72 aa5.71□□□□□ -1.5
CLIP1-206ENST00000535290 LSM10Q969L4 123 aaKnown RBP5.71□□□□□ -1.5
CLIP1-206ENST00000535290 MISP3Q96FF7 219 aa5.71□□□□□ -1.5
CLIP1-206ENST00000535290 GFI1Q99684 422 aa5.71□□□□□ -1.5
CLIP1-206ENST00000535290 TXN2Q99757 166 aa5.71□□□□□ -1.5
CLIP1-206ENST00000535290 DCSTAMPQ9H295 470 aa5.71□□□□□ -1.5
CLIP1-206ENST00000535290 TMEM231Q9H6L2 316 aa5.71□□□□□ -1.5
CLIP1-206ENST00000535290 NDUFA4L2Q9NRX3 87 aa5.71□□□□□ -1.5
CLIP1-206ENST00000535290 DIMT1Q9UNQ2 313 aaKnown RBP5.71□□□□□ -1.5
CLIP1-206ENST00000535290 ORC6Q9Y5N6 252 aa5.71□□□□□ -1.5
CLIP1-206ENST00000535290 A0A075B6Q4 140 aa5.7□□□□□ -1.5
CLIP1-206ENST00000535290 GNG7O60262 68 aa5.7□□□□□ -1.5
CLIP1-206ENST00000535290 MT-CO2P00403 227 aa5.7□□□□□ -1.5
CLIP1-206ENST00000535290 HBE1P02100 147 aa5.7□□□□□ -1.5
CLIP1-206ENST00000535290 DEFB130BP0DP73 79 aa5.7□□□□□ -1.5
CLIP1-206ENST00000535290 DEFB130AP0DP74 79 aa5.7□□□□□ -1.5
CLIP1-206ENST00000535290 FCGR1AP12314 374 aa5.7□□□□□ -1.5
CLIP1-206ENST00000535290 GCSHP23434 173 aa5.7□□□□□ -1.5
CLIP1-206ENST00000535290 NPPCP23582 126 aa5.7□□□□□ -1.5
CLIP1-206ENST00000535290 ALDH3B2P48448 385 aa5.7□□□□□ -1.5
CLIP1-206ENST00000535290 PPP5CP53041 499 aa5.7□□□□□ -1.5
CLIP1-206ENST00000535290 CLDN12P56749 244 aa5.7□□□□□ -1.5
CLIP1-206ENST00000535290 TAS2R31P59538 309 aa5.7□□□□□ -1.5
CLIP1-206ENST00000535290 DEFB1P60022 68 aa5.7□□□□□ -1.5
CLIP1-206ENST00000535290 ERVFC1-1P60608 527 aa5.7□□□□□ -1.5
CLIP1-206ENST00000535290 CT83Q5H943 113 aa5.7□□□□□ -1.5
CLIP1-206ENST00000535290 TMEM69Q5SWH9 247 aa5.7□□□□□ -1.5
CLIP1-206ENST00000535290 GDF5OSQ5U4N7 250 aa5.7□□□□□ -1.5
CLIP1-206ENST00000535290 Q6ZS49 121 aa5.7□□□□□ -1.5
CLIP1-206ENST00000535290 ZBTB34Q8NCN2 500 aa5.7□□□□□ -1.5
CLIP1-206ENST00000535290 OR1P1Q8NH06 330 aa5.7□□□□□ -1.5
CLIP1-206ENST00000535290 PHYHIPQ92561 330 aa5.7□□□□□ -1.5
CLIP1-206ENST00000535290 MOB3AQ96BX8 217 aa5.7□□□□□ -1.5
CLIP1-206ENST00000535290 RAB3CQ96E17 227 aa5.7□□□□□ -1.5
CLIP1-206ENST00000535290 AIFM2Q9BRQ8 373 aa5.7□□□□□ -1.5
CLIP1-206ENST00000535290 ARGLU1Q9NWB6 273 aaPredicted RBP5.7□□□□□ -1.5
CLIP1-206ENST00000535290 A0A087WTM6 91 aa5.69□□□□□ -1.5
CLIP1-206ENST00000535290 A0A1W2PS18 150 aa5.69□□□□□ -1.5
CLIP1-206ENST00000535290 SULT1C2O00338 296 aa5.69□□□□□ -1.5
CLIP1-206ENST00000535290 MFNGO00587 321 aa5.69□□□□□ -1.5
CLIP1-206ENST00000535290 SLC17A2O00624 439 aa5.69□□□□□ -1.5
CLIP1-206ENST00000535290 GYG2O15488 501 aa5.69□□□□□ -1.5
CLIP1-206ENST00000535290 RBFOX2O43251 390 aaKnown RBP eCLIP5.69□□□□□ -1.5
CLIP1-206ENST00000535290 PRM2P04554 102 aa5.69□□□□□ -1.5
CLIP1-206ENST00000535290 CD1AP06126 327 aa5.69□□□□□ -1.5
CLIP1-206ENST00000535290 FGF2P09038 288 aa5.69□□□□□ -1.5
CLIP1-206ENST00000535290 CLEC2LP0C7M8 214 aa5.69□□□□□ -1.5
CLIP1-206ENST00000535290 HLA-DRB4P13762 266 aa5.69□□□□□ -1.5
CLIP1-206ENST00000535290 NQO2P16083 231 aa5.69□□□□□ -1.5
CLIP1-206ENST00000535290 CRYBB3P26998 211 aa5.69□□□□□ -1.5
CLIP1-206ENST00000535290 RRN3P1Q2M238 152 aa5.69□□□□□ -1.5
CLIP1-206ENST00000535290 C2orf76Q3KRA6 126 aa5.69□□□□□ -1.5
CLIP1-206ENST00000535290 ZNF600Q6ZNG1 722 aa5.69□□□□□ -1.5
CLIP1-206ENST00000535290 ZNF709Q8N972 641 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms