RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 CENPOQ9BU64 300 aa8.66□□□□□ -1.02
SVIP-205ENST00000533774 DKK2Q9UBU2 259 aa8.66□□□□□ -1.02
SVIP-205ENST00000533774 V9GY05 133 aa8.66□□□□□ -1.02
SVIP-205ENST00000533774 SSX5O60225 188 aa8.65□□□□□ -1.02
SVIP-205ENST00000533774 EIF4EP06730 217 aaKnown RBP8.65□□□□□ -1.02
SVIP-205ENST00000533774 OR10A3P58181 314 aa8.65□□□□□ -1.02
SVIP-205ENST00000533774 CDNFQ49AH0 187 aa8.65□□□□□ -1.02
SVIP-205ENST00000533774 FAM222AQ5U5X8 452 aa8.65□□□□□ -1.02
SVIP-205ENST00000533774 ZNF705AQ6ZN79 300 aaPredicted RBP8.65□□□□□ -1.02
SVIP-205ENST00000533774 HSD17B13Q7Z5P4 300 aaPredicted RBP8.65□□□□□ -1.02
SVIP-205ENST00000533774 DMBX1Q8NFW5 382 aa8.65□□□□□ -1.02
SVIP-205ENST00000533774 MISP3Q96FF7 219 aa8.65□□□□□ -1.02
SVIP-205ENST00000533774 AIFM2Q9BRQ8 373 aa8.65□□□□□ -1.02
SVIP-205ENST00000533774 RNF167Q9H6Y7 350 aa8.65□□□□□ -1.02
SVIP-205ENST00000533774 PLCXD1Q9NUJ7 323 aa8.65□□□□□ -1.02
SVIP-205ENST00000533774 ZNF705FA8MVS1 300 aaPredicted RBP8.64□□□□□ -1.03
SVIP-205ENST00000533774 MT-CO2P00403 227 aa8.64□□□□□ -1.03
SVIP-205ENST00000533774 ZNF705DP0CH99 300 aaPredicted RBP8.64□□□□□ -1.03
SVIP-205ENST00000533774 ZNF705BP0CI00 300 aaPredicted RBP8.64□□□□□ -1.03
SVIP-205ENST00000533774 CALRP27797 417 aaKnown RBP8.64□□□□□ -1.03
SVIP-205ENST00000533774 XGP55808 180 aa8.64□□□□□ -1.03
SVIP-205ENST00000533774 Q5VSD8 79 aa8.64□□□□□ -1.03
SVIP-205ENST00000533774 PQLC1Q8N2U9 271 aa8.64□□□□□ -1.03
SVIP-205ENST00000533774 BPIFB6Q8NFQ5 453 aa8.64□□□□□ -1.03
SVIP-205ENST00000533774 OR1P1Q8NH06 330 aa8.64□□□□□ -1.03
SVIP-205ENST00000533774 OR51H1Q8NH63 302 aa8.64□□□□□ -1.03
SVIP-205ENST00000533774 NEU1Q99519 415 aa8.64□□□□□ -1.03
SVIP-205ENST00000533774 TXN2Q99757 166 aa8.64□□□□□ -1.03
SVIP-205ENST00000533774 GINS3Q9BRX5 216 aa8.64□□□□□ -1.03
SVIP-205ENST00000533774 NIPSNAP3BQ9BS92 247 aa8.64□□□□□ -1.03
SVIP-205ENST00000533774 PLEKHA2Q9HB19 425 aa8.64□□□□□ -1.03
SVIP-205ENST00000533774 OR51B2Q9Y5P1 312 aa8.64□□□□□ -1.03
SVIP-205ENST00000533774 PUS1Q9Y606 427 aaKnown RBP eCLIP8.64□□□□□ -1.03
SVIP-205ENST00000533774 RASSF2P50749 326 aa8.63□□□□□ -1.03
SVIP-205ENST00000533774 PPP5CP53041 499 aa8.63□□□□□ -1.03
SVIP-205ENST00000533774 FAM3BP58499 235 aaPredicted RBP8.63□□□□□ -1.03
SVIP-205ENST00000533774 FABP5Q01469 135 aa8.63□□□□□ -1.03
SVIP-205ENST00000533774 RCN1Q15293 331 aa8.63□□□□□ -1.03
SVIP-205ENST00000533774 SPHARQ15513 63 aa8.63□□□□□ -1.03
SVIP-205ENST00000533774 MSMO1Q15800 293 aa8.63□□□□□ -1.03
SVIP-205ENST00000533774 HACD4Q5VWC8 232 aa8.63□□□□□ -1.03
SVIP-205ENST00000533774 LYPD1Q8N2G4 141 aa8.63□□□□□ -1.03
SVIP-205ENST00000533774 MND1Q9BWT6 205 aa8.63□□□□□ -1.03
SVIP-205ENST00000533774 KRTAP1-5Q9BYS1 174 aa8.63□□□□□ -1.03
SVIP-205ENST00000533774 ANXA10Q9UJ72 324 aa8.63□□□□□ -1.03
SVIP-205ENST00000533774 TMEM235A6NFC5 223 aa8.62□□□□□ -1.03
SVIP-205ENST00000533774 GNG7O60262 68 aa8.62□□□□□ -1.03
SVIP-205ENST00000533774 FCGR2CP31995 323 aa8.62□□□□□ -1.03
SVIP-205ENST00000533774 FUSP35637 526 aaKnown RBP eCLIP8.62□□□□□ -1.03
SVIP-205ENST00000533774 PSMG4Q5JS54 123 aa8.62□□□□□ -1.03
SVIP-205ENST00000533774 ZNF818PQ6ZRF7 136 aa8.62□□□□□ -1.03
SVIP-205ENST00000533774 OR13F1Q8NGS4 319 aa8.62□□□□□ -1.03
SVIP-205ENST00000533774 C18orf15Q96N68 181 aa8.62□□□□□ -1.03
SVIP-205ENST00000533774 ATG5Q9H1Y0 275 aa8.62□□□□□ -1.03
SVIP-205ENST00000533774 S100A14Q9HCY8 104 aa8.62□□□□□ -1.03
SVIP-205ENST00000533774 COMMD9Q9P000 198 aa8.62□□□□□ -1.03
SVIP-205ENST00000533774 TMED3Q9Y3Q3 217 aa8.62□□□□□ -1.03
SVIP-205ENST00000533774 MARCH11A6NNE9 402 aa8.61□□□□□ -1.03
SVIP-205ENST00000533774 H3BMM0 161 aa8.61□□□□□ -1.03
SVIP-205ENST00000533774 ARL6IP5O75915 188 aa8.61□□□□□ -1.03
SVIP-205ENST00000533774 PPYP01298 95 aa8.61□□□□□ -1.03
SVIP-205ENST00000533774 P2RY1P47900 373 aa8.61□□□□□ -1.03
SVIP-205ENST00000533774 FXYD7P58549 80 aa8.61□□□□□ -1.03
SVIP-205ENST00000533774 DEFB1P60022 68 aa8.61□□□□□ -1.03
SVIP-205ENST00000533774 OXA1LQ15070 435 aa8.61□□□□□ -1.03
SVIP-205ENST00000533774 ZNF600Q6ZNG1 722 aa8.61□□□□□ -1.03
SVIP-205ENST00000533774 ZBTB34Q8NCN2 500 aa8.61□□□□□ -1.03
SVIP-205ENST00000533774 UFD1Q92890 307 aa8.61□□□□□ -1.03
SVIP-205ENST00000533774 SLC5A7Q9GZV3 580 aa8.61□□□□□ -1.03
SVIP-205ENST00000533774 HMCN2Q8NDA2 5059 aa8.6□□□□□ -1.03
SVIP-205ENST00000533774 IGHV3OR16-12A0A075B7B8 117 aa8.6□□□□□ -1.03
SVIP-205ENST00000533774 TMEM189A5PLL7 270 aa8.6□□□□□ -1.03
SVIP-205ENST00000533774 METTL21EPA6NDL7 271 aa8.6□□□□□ -1.03
SVIP-205ENST00000533774 IFITM5A6NNB3 132 aa8.6□□□□□ -1.03
SVIP-205ENST00000533774 ATP5HO75947 161 aa8.6□□□□□ -1.03
SVIP-205ENST00000533774 TMEM50AO95807 157 aa8.6□□□□□ -1.03
SVIP-205ENST00000533774 NPPCP23582 126 aa8.6□□□□□ -1.03
SVIP-205ENST00000533774 CRYBB3P26998 211 aa8.6□□□□□ -1.03
SVIP-205ENST00000533774 FGF9P31371 208 aaPredicted RBP8.6□□□□□ -1.03
SVIP-205ENST00000533774 G6PCP35575 357 aa8.6□□□□□ -1.03
SVIP-205ENST00000533774 FXYD4P59646 89 aa8.6□□□□□ -1.03
SVIP-205ENST00000533774 CATR1Q13166 79 aa8.6□□□□□ -1.03
SVIP-205ENST00000533774 DHRS2Q13268 280 aa8.6□□□□□ -1.03
SVIP-205ENST00000533774 DHRSXQ8N5I4 330 aa8.6□□□□□ -1.03
SVIP-205ENST00000533774 PINX1Q96BK5 328 aaKnown RBP8.6□□□□□ -1.03
SVIP-205ENST00000533774 MOB3AQ96BX8 217 aa8.6□□□□□ -1.03
SVIP-205ENST00000533774 ATG101Q9BSB4 218 aa8.6□□□□□ -1.03
SVIP-205ENST00000533774 C1QTNF4Q9BXJ3 329 aa8.6□□□□□ -1.03
SVIP-205ENST00000533774 MRPL36Q9P0J6 103 aaKnown RBP8.6□□□□□ -1.03
SVIP-205ENST00000533774 MDFICQ9P1T7 246 aa8.6□□□□□ -1.03
SVIP-205ENST00000533774 LINC00588Q9Y4M8 146 aa8.6□□□□□ -1.03
SVIP-205ENST00000533774 RFNGQ9Y644 331 aa8.6□□□□□ -1.03
SVIP-205ENST00000533774 HELTA6NFD8 242 aa8.59□□□□□ -1.03
SVIP-205ENST00000533774 SMIM9A6NGZ8 99 aa8.59□□□□□ -1.03
SVIP-205ENST00000533774 RGS13O14921 159 aa8.59□□□□□ -1.03
SVIP-205ENST00000533774 KRASP01116 189 aa8.59□□□□□ -1.03
SVIP-205ENST00000533774 LPAR6P43657 344 aa8.59□□□□□ -1.03
SVIP-205ENST00000533774 GDF5OSQ5U4N7 250 aa8.59□□□□□ -1.03
SVIP-205ENST00000533774 AADACL3Q5VUY0 350 aa8.59□□□□□ -1.03
SVIP-205ENST00000533774 C15orf53Q8NAA6 179 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms