RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 IGHV3-21A0A0B4J1V1 117 aa15.53■□□□□ 0.08
CCS-208ENST00000533244 DUXBA0A1W2PPF3 345 aa15.53■□□□□ 0.08
CCS-208ENST00000533244 A8MWP6 167 aa15.53■□□□□ 0.08
CCS-208ENST00000533244 RNASE2P10153 161 aaKnown RBP15.53■□□□□ 0.08
CCS-208ENST00000533244 FCGR2BP31994 310 aaPredicted RBP15.53■□□□□ 0.08
CCS-208ENST00000533244 HOXA1P49639 335 aaPredicted RBP15.53■□□□□ 0.08
CCS-208ENST00000533244 UBE2MP61081 183 aaKnown RBP15.53■□□□□ 0.08
CCS-208ENST00000533244 DCTN2Q13561 401 aaKnown RBP15.53■□□□□ 0.08
CCS-208ENST00000533244 PIGBOS1A0A0B4J2F0 54 aa15.52■□□□□ 0.08
CCS-208ENST00000533244 SFT2D2O95562 160 aa15.52■□□□□ 0.08
CCS-208ENST00000533244 SULT1A3P0DMM9 295 aa15.52■□□□□ 0.08
CCS-208ENST00000533244 SULT1A4P0DMN0 295 aa15.52■□□□□ 0.08
CCS-208ENST00000533244 GP9P14770 177 aa15.52■□□□□ 0.08
CCS-208ENST00000533244 PPP1R1AQ13522 171 aa15.52■□□□□ 0.08
CCS-208ENST00000533244 ANKRD55Q3KP44 614 aa15.52■□□□□ 0.08
CCS-208ENST00000533244 FAM106AQ4KMX7 169 aa15.52■□□□□ 0.08
CCS-208ENST00000533244 SPSB3Q6PJ21 355 aa15.52■□□□□ 0.08
CCS-208ENST00000533244 PLET1Q6UQ28 207 aa15.52■□□□□ 0.08
CCS-208ENST00000533244 MISP3Q96FF7 219 aa15.52■□□□□ 0.08
CCS-208ENST00000533244 ZNF436Q9C0F3 470 aaPredicted RBP15.52■□□□□ 0.08
CCS-208ENST00000533244 ZC4H2Q9NQZ6 224 aa15.52■□□□□ 0.08
CCS-208ENST00000533244 CACFD1Q9UGQ2 172 aa15.52■□□□□ 0.08
CCS-208ENST00000533244 LINC00854A0A1B0GVQ3 168 aa15.51■□□□□ 0.07
CCS-208ENST00000533244 OR2T8A6NH00 312 aa15.51■□□□□ 0.07
CCS-208ENST00000533244 C2orf70A6NJV1 201 aa15.51■□□□□ 0.07
CCS-208ENST00000533244 CENPXA8MT69 81 aa15.51■□□□□ 0.07
CCS-208ENST00000533244 PLA2G10O15496 165 aa15.51■□□□□ 0.07
CCS-208ENST00000533244 MT-CO2P00403 227 aa15.51■□□□□ 0.07
CCS-208ENST00000533244 VAMP1P23763 118 aa15.51■□□□□ 0.07
CCS-208ENST00000533244 SNCAP37840 140 aa15.51■□□□□ 0.07
CCS-208ENST00000533244 CCDC32Q9BV29 185 aa15.51■□□□□ 0.07
CCS-208ENST00000533244 PTTG2Q9NZH5 202 aa15.51■□□□□ 0.07
CCS-208ENST00000533244 TMEM213A2RRL7 107 aa15.51■□□□□ 0.07
CCS-208ENST00000533244 LY86O95711 162 aa15.51■□□□□ 0.07
CCS-208ENST00000533244 EDN2P20800 178 aa15.51■□□□□ 0.07
CCS-208ENST00000533244 ADMP35318 185 aa15.51■□□□□ 0.07
CCS-208ENST00000533244 SMCO1Q147U7 214 aa15.51■□□□□ 0.07
CCS-208ENST00000533244 DEFB121Q5J5C9 76 aa15.51■□□□□ 0.07
CCS-208ENST00000533244 UNQ9165/PRO28630Q6UXU0 137 aa15.51■□□□□ 0.07
CCS-208ENST00000533244 ZNF414Q96IQ9 312 aa15.51■□□□□ 0.07
CCS-208ENST00000533244 TXN2Q99757 166 aa15.51■□□□□ 0.07
CCS-208ENST00000533244 CHRDL1Q9BU40 450 aa15.51■□□□□ 0.07
CCS-208ENST00000533244 ENY2Q9NPA8 101 aa15.51■□□□□ 0.07
CCS-208ENST00000533244 SUB1P53999 127 aaKnown RBP eCLIP15.5■□□□□ 0.07
CCS-208ENST00000533244 MFAP4P55083 255 aa15.5■□□□□ 0.07
CCS-208ENST00000533244 OR2K2Q8NGT1 345 aa15.5■□□□□ 0.07
CCS-208ENST00000533244 BATF3Q9NR55 127 aa15.5■□□□□ 0.07
CCS-208ENST00000533244 GAR1Q9NY12 217 aaKnown RBP15.5■□□□□ 0.07
CCS-208ENST00000533244 HSPB7Q9UBY9 170 aa15.5■□□□□ 0.07
CCS-208ENST00000533244 FLVCR2Q9UPI3 526 aa15.5■□□□□ 0.07
CCS-208ENST00000533244 DNAH9Q9NYC9 4486 aa15.49■□□□□ 0.07
CCS-208ENST00000533244 A0A1B0GU03 582 aa15.49■□□□□ 0.07
CCS-208ENST00000533244 CORTO00230 105 aa15.49■□□□□ 0.07
CCS-208ENST00000533244 CTSGP08311 255 aa15.49■□□□□ 0.07
CCS-208ENST00000533244 FOLR2P14207 255 aa15.49■□□□□ 0.07
CCS-208ENST00000533244 Q56UQ5 140 aa15.49■□□□□ 0.07
CCS-208ENST00000533244 S100ZQ8WXG8 99 aa15.49■□□□□ 0.07
CCS-208ENST00000533244 TMEM190Q8WZ59 177 aa15.49■□□□□ 0.07
CCS-208ENST00000533244 ZNF320A2RRD8 509 aa15.48■□□□□ 0.07
CCS-208ENST00000533244 LYRM1O43325 122 aa15.48■□□□□ 0.07
CCS-208ENST00000533244 PITX3O75364 302 aa15.48■□□□□ 0.07
CCS-208ENST00000533244 CBLN1P23435 193 aa15.48■□□□□ 0.07
CCS-208ENST00000533244 HTR2BP41595 481 aa15.48■□□□□ 0.07
CCS-208ENST00000533244 ELLP55199 621 aaPredicted RBP15.48■□□□□ 0.07
CCS-208ENST00000533244 TNFRSF9Q07011 255 aa15.48■□□□□ 0.07
CCS-208ENST00000533244 UBAC2Q8NBM4 344 aa15.48■□□□□ 0.07
CCS-208ENST00000533244 PINX1Q96BK5 328 aaKnown RBP15.48■□□□□ 0.07
CCS-208ENST00000533244 IGHV3-35A0A0C4DH35 117 aa15.47■□□□□ 0.07
CCS-208ENST00000533244 C9orf170A2RU37 121 aa15.47■□□□□ 0.07
CCS-208ENST00000533244 NDUFA4O00483 81 aa15.47■□□□□ 0.07
CCS-208ENST00000533244 C8orf88P0DMB2 117 aa15.47■□□□□ 0.07
CCS-208ENST00000533244 SLC25A6P12236 298 aa15.47■□□□□ 0.07
CCS-208ENST00000533244 DEFB114Q30KQ6 69 aa15.47■□□□□ 0.07
CCS-208ENST00000533244 C2orf83Q53S99 150 aa15.47■□□□□ 0.07
CCS-208ENST00000533244 LCN12Q6JVE5 192 aa15.47■□□□□ 0.07
CCS-208ENST00000533244 B9D2Q9BPU9 175 aa15.47■□□□□ 0.07
CCS-208ENST00000533244 FNDC4Q9H6D8 234 aaPredicted RBP15.47■□□□□ 0.07
CCS-208ENST00000533244 PALMDQ9NP74 551 aa15.47■□□□□ 0.07
CCS-208ENST00000533244 HEYLQ9NQ87 328 aaPredicted RBP15.47■□□□□ 0.07
CCS-208ENST00000533244 TMED3Q9Y3Q3 217 aa15.47■□□□□ 0.07
CCS-208ENST00000533244 IZUMO1RA6ND01 250 aa15.46■□□□□ 0.07
CCS-208ENST00000533244 CEBPZOSA8MTT3 80 aa15.46■□□□□ 0.07
CCS-208ENST00000533244 NXPH3O95157 252 aa15.46■□□□□ 0.07
CCS-208ENST00000533244 IGHV3-48P01763 117 aa15.46■□□□□ 0.07
CCS-208ENST00000533244 CD300EQ496F6 205 aaPredicted RBP15.46■□□□□ 0.07
CCS-208ENST00000533244 C11orf87Q6NUJ2 197 aa15.46■□□□□ 0.07
CCS-208ENST00000533244 TMEM170AQ8WVE7 144 aa15.46■□□□□ 0.07
CCS-208ENST00000533244 CACNG8Q8WXS5 425 aa15.46■□□□□ 0.07
CCS-208ENST00000533244 TECRQ9NZ01 308 aaKnown RBP15.46■□□□□ 0.07
CCS-208ENST00000533244 UFC1Q9Y3C8 167 aa15.46■□□□□ 0.07
CCS-208ENST00000533244 OR4E1P0C645 316 aa15.45■□□□□ 0.06
CCS-208ENST00000533244 DHRS2Q13268 280 aa15.45■□□□□ 0.06
CCS-208ENST00000533244 TM4SF20Q53R12 229 aa15.45■□□□□ 0.06
CCS-208ENST00000533244 Q8N1Y9 231 aa15.45■□□□□ 0.06
CCS-208ENST00000533244 SLC24A4Q8NFF2 622 aa15.45■□□□□ 0.06
CCS-208ENST00000533244 DYNLRB2Q8TF09 96 aa15.45■□□□□ 0.06
CCS-208ENST00000533244 MARC2Q969Z3 335 aa15.45■□□□□ 0.06
CCS-208ENST00000533244 SMAD5-AS1Q9Y6J3 95 aa15.45■□□□□ 0.06
CCS-208ENST00000533244 NUPL2O15504 423 aaKnown RBP15.44■□□□□ 0.06
CCS-208ENST00000533244 ANXA7P20073 488 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms