RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 TMEM50AO95807 157 aa8.76□□□□□ -1.01
TRAPPC4-213ENST00000533149 IAPPP10997 89 aa8.76□□□□□ -1.01
TRAPPC4-213ENST00000533149 CXCL2P19875 107 aa8.76□□□□□ -1.01
TRAPPC4-213ENST00000533149 PVALBP20472 110 aaPredicted RBP8.76□□□□□ -1.01
TRAPPC4-213ENST00000533149 PAX9P55771 341 aa8.76□□□□□ -1.01
TRAPPC4-213ENST00000533149 RPL8P62917 257 aaKnown RBP8.76□□□□□ -1.01
TRAPPC4-213ENST00000533149 VAMP2P63027 116 aa8.76□□□□□ -1.01
TRAPPC4-213ENST00000533149 PJVKQ0ZLH3 352 aa8.76□□□□□ -1.01
TRAPPC4-213ENST00000533149 MMDQ15546 238 aa8.76□□□□□ -1.01
TRAPPC4-213ENST00000533149 PRSS8Q16651 343 aa8.76□□□□□ -1.01
TRAPPC4-213ENST00000533149 LGALSLQ3ZCW2 172 aaPredicted RBP8.76□□□□□ -1.01
TRAPPC4-213ENST00000533149 SPINK9Q5DT21 86 aa8.76□□□□□ -1.01
TRAPPC4-213ENST00000533149 LAMTOR1Q6IAA8 161 aa8.76□□□□□ -1.01
TRAPPC4-213ENST00000533149 TEX38Q6PEX7 206 aa8.76□□□□□ -1.01
TRAPPC4-213ENST00000533149 LCNL1Q6ZST4 164 aa8.76□□□□□ -1.01
TRAPPC4-213ENST00000533149 ZNF429Q86V71 674 aa8.76□□□□□ -1.01
TRAPPC4-213ENST00000533149 NOL4LQ96MY1 436 aaPredicted RBP8.76□□□□□ -1.01
TRAPPC4-213ENST00000533149 RAB40CQ96S21 281 aa8.76□□□□□ -1.01
TRAPPC4-213ENST00000533149 MFFQ9GZY8 342 aa8.76□□□□□ -1.01
TRAPPC4-213ENST00000533149 ZNF430Q9H8G1 570 aaPredicted RBP8.76□□□□□ -1.01
TRAPPC4-213ENST00000533149 TPSG1Q9NRR2 321 aa8.76□□□□□ -1.01
TRAPPC4-213ENST00000533149 TNFSF18Q9UNG2 199 aa8.76□□□□□ -1.01
TRAPPC4-213ENST00000533149 MOB4Q9Y3A3 225 aa8.76□□□□□ -1.01
TRAPPC4-213ENST00000533149 HERC2O95714 4834 aa8.75□□□□□ -1.01
TRAPPC4-213ENST00000533149 FAM24AA6NFZ4 105 aa8.75□□□□□ -1.01
TRAPPC4-213ENST00000533149 NDUFA3O95167 84 aa8.75□□□□□ -1.01
TRAPPC4-213ENST00000533149 NUP62P37198 522 aaPredicted RBP8.75□□□□□ -1.01
TRAPPC4-213ENST00000533149 PLGLAQ15195 96 aa8.75□□□□□ -1.01
TRAPPC4-213ENST00000533149 C5orf64Q2M2E5 130 aa8.75□□□□□ -1.01
TRAPPC4-213ENST00000533149 DEFB136Q30KP8 78 aa8.75□□□□□ -1.01
TRAPPC4-213ENST00000533149 PPP1R27Q86WC6 154 aa8.75□□□□□ -1.01
TRAPPC4-213ENST00000533149 MMD2Q8IY49 270 aa8.75□□□□□ -1.01
TRAPPC4-213ENST00000533149 C9orf62Q8N4C0 152 aa8.75□□□□□ -1.01
TRAPPC4-213ENST00000533149 INO80EQ8NBZ0 244 aaPredicted RBP8.75□□□□□ -1.01
TRAPPC4-213ENST00000533149 OR1L8Q8NGR8 309 aa8.75□□□□□ -1.01
TRAPPC4-213ENST00000533149 SMIM8Q96KF7 97 aa8.75□□□□□ -1.01
TRAPPC4-213ENST00000533149 HINT2Q9BX68 163 aa8.75□□□□□ -1.01
TRAPPC4-213ENST00000533149 KIAA1456Q9P272 454 aa8.75□□□□□ -1.01
TRAPPC4-213ENST00000533149 ZNF257Q9Y2Q1 563 aa8.75□□□□□ -1.01
TRAPPC4-213ENST00000533149 STARD9Q9P2P6 4700 aa8.74□□□□□ -1.01
TRAPPC4-213ENST00000533149 MSGN1A6NI15 193 aa8.74□□□□□ -1.01
TRAPPC4-213ENST00000533149 MAS1LP35410 378 aa8.74□□□□□ -1.01
TRAPPC4-213ENST00000533149 P2RY1P47900 373 aa8.74□□□□□ -1.01
TRAPPC4-213ENST00000533149 CDX1P47902 265 aaPredicted RBP8.74□□□□□ -1.01
TRAPPC4-213ENST00000533149 AP2S1P53680 142 aaPredicted RBP8.74□□□□□ -1.01
TRAPPC4-213ENST00000533149 TAS2R30P59541 319 aa8.74□□□□□ -1.01
TRAPPC4-213ENST00000533149 ACOT7LQ6ZUV0 252 aa8.74□□□□□ -1.01
TRAPPC4-213ENST00000533149 OR8H1Q8NGG4 311 aa8.74□□□□□ -1.01
TRAPPC4-213ENST00000533149 OR5B3Q8NH48 314 aa8.74□□□□□ -1.01
TRAPPC4-213ENST00000533149 DTD1Q8TEA8 209 aa8.74□□□□□ -1.01
TRAPPC4-213ENST00000533149 GON7Q9BXV9 100 aa8.74□□□□□ -1.01
TRAPPC4-213ENST00000533149 COMMD5Q9GZQ3 224 aa8.74□□□□□ -1.01
TRAPPC4-213ENST00000533149 PSENENQ9NZ42 101 aa8.74□□□□□ -1.01
TRAPPC4-213ENST00000533149 HSPB11Q9Y547 144 aa8.74□□□□□ -1.01
TRAPPC4-213ENST00000533149 RNF222A6NCQ9 220 aa8.73□□□□□ -1.01
TRAPPC4-213ENST00000533149 ACTL6BO94805 426 aa8.73□□□□□ -1.01
TRAPPC4-213ENST00000533149 RPLP1P05386 114 aaKnown RBP8.73□□□□□ -1.01
TRAPPC4-213ENST00000533149 FGF2P09038 288 aa8.73□□□□□ -1.01
TRAPPC4-213ENST00000533149 RPL12P30050 165 aaKnown RBP8.73□□□□□ -1.01
TRAPPC4-213ENST00000533149 GNB1P62873 340 aa8.73□□□□□ -1.01
TRAPPC4-213ENST00000533149 OR2F1Q13607 317 aa8.73□□□□□ -1.01
TRAPPC4-213ENST00000533149 TNXAQ16473 311 aa8.73□□□□□ -1.01
TRAPPC4-213ENST00000533149 C10orf55Q5SWW7 151 aa8.73□□□□□ -1.01
TRAPPC4-213ENST00000533149 TMUB2Q71RG4 321 aa8.73□□□□□ -1.01
TRAPPC4-213ENST00000533149 STPG2Q8N412 459 aa8.73□□□□□ -1.01
TRAPPC4-213ENST00000533149 KCNRGQ8N5I3 272 aa8.73□□□□□ -1.01
TRAPPC4-213ENST00000533149 OR2C3Q8N628 320 aa8.73□□□□□ -1.01
TRAPPC4-213ENST00000533149 TMEM252Q8N6L7 170 aa8.73□□□□□ -1.01
TRAPPC4-213ENST00000533149 Q8N9W7 124 aa8.73□□□□□ -1.01
TRAPPC4-213ENST00000533149 AQP10Q96PS8 301 aa8.73□□□□□ -1.01
TRAPPC4-213ENST00000533149 CIB3Q96Q77 187 aaPredicted RBP8.73□□□□□ -1.01
TRAPPC4-213ENST00000533149 SPATA25Q9BR10 227 aa8.73□□□□□ -1.01
TRAPPC4-213ENST00000533149 ENY2Q9NPA8 101 aa8.73□□□□□ -1.01
TRAPPC4-213ENST00000533149 HEYLQ9NQ87 328 aaPredicted RBP8.73□□□□□ -1.01
TRAPPC4-213ENST00000533149 ZC4H2Q9NQZ6 224 aa8.73□□□□□ -1.01
TRAPPC4-213ENST00000533149 NDUFA4L2Q9NRX3 87 aa8.73□□□□□ -1.01
TRAPPC4-213ENST00000533149 A0A0D9SG52 128 aa8.72□□□□□ -1.01
TRAPPC4-213ENST00000533149 IGSF23A1L1A6 192 aa8.72□□□□□ -1.01
TRAPPC4-213ENST00000533149 CGB1A6NKQ9 187 aa8.72□□□□□ -1.01
TRAPPC4-213ENST00000533149 E7EUB6 86 aa8.72□□□□□ -1.01
TRAPPC4-213ENST00000533149 CNIH1O95406 144 aa8.72□□□□□ -1.01
TRAPPC4-213ENST00000533149 CA2P00918 260 aa8.72□□□□□ -1.01
TRAPPC4-213ENST00000533149 GP9P14770 177 aa8.72□□□□□ -1.01
TRAPPC4-213ENST00000533149 RPL27AP46776 148 aaKnown RBP8.72□□□□□ -1.01
TRAPPC4-213ENST00000533149 HOXA1P49639 335 aaPredicted RBP8.72□□□□□ -1.01
TRAPPC4-213ENST00000533149 CAV2P51636 162 aa8.72□□□□□ -1.01
TRAPPC4-213ENST00000533149 PRCDQ00LT1 54 aa8.72□□□□□ -1.01
TRAPPC4-213ENST00000533149 FHL3Q13643 280 aa8.72□□□□□ -1.01
TRAPPC4-213ENST00000533149 SPANXN5Q5MJ07 72 aa8.72□□□□□ -1.01
TRAPPC4-213ENST00000533149 SLC35E3Q7Z769 313 aa8.72□□□□□ -1.01
TRAPPC4-213ENST00000533149 C4orf3Q8WVX3 66 aa8.72□□□□□ -1.01
TRAPPC4-213ENST00000533149 RASL11BQ9BPW5 248 aa8.72□□□□□ -1.01
TRAPPC4-213ENST00000533149 SLC25A31Q9H0C2 315 aa8.72□□□□□ -1.01
TRAPPC4-213ENST00000533149 HIPK2Q9H2X6 1198 aa8.72□□□□□ -1.01
TRAPPC4-213ENST00000533149 LYRM2Q9NU23 88 aaPredicted RBP8.72□□□□□ -1.01
TRAPPC4-213ENST00000533149 LINC00527Q9UJ94 153 aa8.72□□□□□ -1.01
TRAPPC4-213ENST00000533149 WSB1Q9Y6I7 421 aa8.72□□□□□ -1.01
TRAPPC4-213ENST00000533149 A0A1B0GW64 132 aa8.71□□□□□ -1.02
TRAPPC4-213ENST00000533149 A0A1W2PN81 502 aa8.71□□□□□ -1.02
TRAPPC4-213ENST00000533149 H3BP45 60 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms