RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 DDTP30046 118 aa12.68□□□□□ -0.38
PCDHA3-202ENST00000532566 RELBQ01201 579 aa12.68□□□□□ -0.38
PCDHA3-202ENST00000532566 RPP25LQ8N5L8 163 aaKnown RBP12.68□□□□□ -0.38
PCDHA3-202ENST00000532566 IGKV1-6A0A0C4DH72 117 aa12.68□□□□□ -0.38
PCDHA3-202ENST00000532566 LOC389332A0A1B0GUA5 103 aa12.68□□□□□ -0.38
PCDHA3-202ENST00000532566 TREML4Q6UXN2 200 aa12.68□□□□□ -0.38
PCDHA3-202ENST00000532566 RFNGQ9Y644 331 aa12.68□□□□□ -0.38
PCDHA3-202ENST00000532566 ZNF106Q9H2Y7 1883 aaKnown RBP12.68□□□□□ -0.38
PCDHA3-202ENST00000532566 LEPROTL1O95214 131 aa12.68□□□□□ -0.38
PCDHA3-202ENST00000532566 TAS2R60P59551 318 aa12.68□□□□□ -0.38
PCDHA3-202ENST00000532566 EFNB3Q15768 340 aa12.68□□□□□ -0.38
PCDHA3-202ENST00000532566 MBNL3Q9NUK0 354 aaKnown RBP12.68□□□□□ -0.38
PCDHA3-202ENST00000532566 CKS2P33552 79 aa12.67□□□□□ -0.38
PCDHA3-202ENST00000532566 PMCHL1Q16048 86 aa12.67□□□□□ -0.38
PCDHA3-202ENST00000532566 GLRX5Q86SX6 157 aa12.67□□□□□ -0.38
PCDHA3-202ENST00000532566 PPP1R27Q86WC6 154 aa12.67□□□□□ -0.38
PCDHA3-202ENST00000532566 MED13LQ71F56 2210 aa12.67□□□□□ -0.38
PCDHA3-202ENST00000532566 LYNX1G3V0Z9 82 aa12.67□□□□□ -0.38
PCDHA3-202ENST00000532566 LYNX1P0DP58 116 aa12.67□□□□□ -0.38
PCDHA3-202ENST00000532566 RPS20P60866 119 aaKnown RBP12.67□□□□□ -0.38
PCDHA3-202ENST00000532566 Q6ZRM9 215 aa12.67□□□□□ -0.38
PCDHA3-202ENST00000532566 OR10J6PQ8NGY7 276 aa12.67□□□□□ -0.38
PCDHA3-202ENST00000532566 GGTLC1Q9BX51 225 aa12.67□□□□□ -0.38
PCDHA3-202ENST00000532566 ZNF257Q9Y2Q1 563 aa12.67□□□□□ -0.38
PCDHA3-202ENST00000532566 AUP1Q9Y679 476 aa12.67□□□□□ -0.38
PCDHA3-202ENST00000532566 ABCA1O95477 2261 aa12.67□□□□□ -0.38
PCDHA3-202ENST00000532566 COLCA2A8K830 154 aa12.67□□□□□ -0.38
PCDHA3-202ENST00000532566 TCAPO15273 167 aa12.67□□□□□ -0.38
PCDHA3-202ENST00000532566 IGLV3-1P01715 115 aa12.67□□□□□ -0.38
PCDHA3-202ENST00000532566 RBPMS2Q6ZRY4 209 aaKnown RBP12.67□□□□□ -0.38
PCDHA3-202ENST00000532566 FOXA2Q9Y261 457 aaPredicted RBP12.67□□□□□ -0.38
PCDHA3-202ENST00000532566 GTF3C1Q12789 2109 aa12.67□□□□□ -0.38
PCDHA3-202ENST00000532566 LINC00473A8K010 186 aa12.67□□□□□ -0.38
PCDHA3-202ENST00000532566 MGPP08493 103 aa12.67□□□□□ -0.38
PCDHA3-202ENST00000532566 FAM169BQ8N8A8 192 aa12.67□□□□□ -0.38
PCDHA3-202ENST00000532566 ZNF738Q8NE65 137 aa12.67□□□□□ -0.38
PCDHA3-202ENST00000532566 RNF138Q8WVD3 245 aa12.67□□□□□ -0.38
PCDHA3-202ENST00000532566 C21orf62Q9NYP8 219 aa12.67□□□□□ -0.38
PCDHA3-202ENST00000532566 C1QTNF9P0C862 333 aa12.66□□□□□ -0.38
PCDHA3-202ENST00000532566 ZNF474Q6S9Z5 364 aaPredicted RBP12.66□□□□□ -0.38
PCDHA3-202ENST00000532566 VPS25Q9BRG1 176 aa12.66□□□□□ -0.38
PCDHA3-202ENST00000532566 NOTCH2Q04721 2471 aa12.66□□□□□ -0.38
PCDHA3-202ENST00000532566 ZFHX2Q9C0A1 2572 aaPredicted RBP12.66□□□□□ -0.38
PCDHA3-202ENST00000532566 IGKV1D-17A0A075B6S4 117 aa12.66□□□□□ -0.38
PCDHA3-202ENST00000532566 TRAV9-1A0A075B6T8 112 aa12.66□□□□□ -0.38
PCDHA3-202ENST00000532566 S4R3C0 116 aa12.66□□□□□ -0.38
PCDHA3-202ENST00000532566 NPPCP23582 126 aa12.66□□□□□ -0.38
PCDHA3-202ENST00000532566 HBBP68871 147 aa12.66□□□□□ -0.38
PCDHA3-202ENST00000532566 TEX45Q8NA69 505 aa12.66□□□□□ -0.38
PCDHA3-202ENST00000532566 RNF166Q96A37 237 aaPredicted RBP12.66□□□□□ -0.38
PCDHA3-202ENST00000532566 WNT10AQ9GZT5 417 aa12.66□□□□□ -0.38
PCDHA3-202ENST00000532566 RAXQ9Y2V3 346 aa12.66□□□□□ -0.38
PCDHA3-202ENST00000532566 IFITM10A6NMD0 228 aa12.66□□□□□ -0.38
PCDHA3-202ENST00000532566 TBR1Q16650 682 aa12.66□□□□□ -0.38
PCDHA3-202ENST00000532566 TNFRSF14Q92956 283 aa12.66□□□□□ -0.38
PCDHA3-202ENST00000532566 EEF1AKMT3Q96AZ1 226 aa12.66□□□□□ -0.38
PCDHA3-202ENST00000532566 A0A1W2PRE2 83 aa12.65□□□□□ -0.38
PCDHA3-202ENST00000532566 SH2D7A6NKC9 451 aaPredicted RBP12.65□□□□□ -0.38
PCDHA3-202ENST00000532566 CGB1A6NKQ9 187 aa12.65□□□□□ -0.38
PCDHA3-202ENST00000532566 J3QR89 54 aa12.65□□□□□ -0.38
PCDHA3-202ENST00000532566 COX6B1P14854 86 aa12.65□□□□□ -0.38
PCDHA3-202ENST00000532566 PRB3Q04118 309 aaPredicted RBP12.65□□□□□ -0.38
PCDHA3-202ENST00000532566 ATP5G2Q06055 141 aa12.65□□□□□ -0.38
PCDHA3-202ENST00000532566 SAPCD1Q5SSQ6 148 aa12.65□□□□□ -0.38
PCDHA3-202ENST00000532566 WIPF3A6NGB9 483 aa12.65□□□□□ -0.38
PCDHA3-202ENST00000532566 RELQ04864 619 aaPredicted RBP12.65□□□□□ -0.38
PCDHA3-202ENST00000532566 MYOZ3Q8TDC0 251 aa12.65□□□□□ -0.38
PCDHA3-202ENST00000532566 ARPC1AQ92747 370 aa12.65□□□□□ -0.38
PCDHA3-202ENST00000532566 IMMP2LQ96T52 175 aa12.65□□□□□ -0.38
PCDHA3-202ENST00000532566 NEU1Q99519 415 aa12.65□□□□□ -0.38
PCDHA3-202ENST00000532566 NBR2O15453 112 aa12.65□□□□□ -0.38
PCDHA3-202ENST00000532566 RPLP1P05386 114 aaKnown RBP12.65□□□□□ -0.38
PCDHA3-202ENST00000532566 LY6EQ16553 131 aa12.65□□□□□ -0.38
PCDHA3-202ENST00000532566 LBHQ53QV2 105 aaPredicted RBP12.65□□□□□ -0.38
PCDHA3-202ENST00000532566 FAM209BQ5JX69 171 aa12.65□□□□□ -0.38
PCDHA3-202ENST00000532566 PLA2G2CQ5R387 149 aa12.65□□□□□ -0.38
PCDHA3-202ENST00000532566 LIME1Q9H400 295 aa12.65□□□□□ -0.38
PCDHA3-202ENST00000532566 CBLN4Q9NTU7 201 aa12.65□□□□□ -0.38
PCDHA3-202ENST00000532566 STAG3L2P0CL84 134 aa12.64□□□□□ -0.39
PCDHA3-202ENST00000532566 STAG3L3P0CL85 134 aa12.64□□□□□ -0.39
PCDHA3-202ENST00000532566 FBXL7Q9UJT9 491 aa12.64□□□□□ -0.39
PCDHA3-202ENST00000532566 COL4A3Q01955 1670 aa12.64□□□□□ -0.39
PCDHA3-202ENST00000532566 TCRBV4S1A1TA0A5B7 111 aa12.64□□□□□ -0.39
PCDHA3-202ENST00000532566 ZNF585BQ52M93 769 aa12.64□□□□□ -0.39
PCDHA3-202ENST00000532566 DOCK11Q5JSL3 2073 aa12.64□□□□□ -0.39
PCDHA3-202ENST00000532566 TM4SF20Q53R12 229 aa12.64□□□□□ -0.39
PCDHA3-202ENST00000532566 OR10W1Q8NGF6 305 aa12.64□□□□□ -0.39
PCDHA3-202ENST00000532566 TMEM242Q9NWH2 141 aa12.64□□□□□ -0.39
PCDHA3-202ENST00000532566 TMEM178BH3BS89 294 aa12.64□□□□□ -0.39
PCDHA3-202ENST00000532566 HTN1P15515 57 aa12.64□□□□□ -0.39
PCDHA3-202ENST00000532566 SPATA45Q537H7 98 aa12.64□□□□□ -0.39
PCDHA3-202ENST00000532566 GPR82Q96P67 336 aa12.64□□□□□ -0.39
PCDHA3-202ENST00000532566 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.63□□□□□ -0.39
PCDHA3-202ENST00000532566 IGHV3OR16-10A0A075B7F0 116 aa12.63□□□□□ -0.39
PCDHA3-202ENST00000532566 A0A0G2JNJ9 132 aa12.63□□□□□ -0.39
PCDHA3-202ENST00000532566 ANOS1P23352 680 aa12.63□□□□□ -0.39
PCDHA3-202ENST00000532566 Q9UFV3 132 aa12.63□□□□□ -0.39
PCDHA3-202ENST00000532566 ZNF503-AS2A6NEH8 195 aa12.63□□□□□ -0.39
PCDHA3-202ENST00000532566 PGPEP1LA6NFU8 196 aa12.63□□□□□ -0.39
PCDHA3-202ENST00000532566 HIST1H2BKO60814 126 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms