RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 SEC11BP0C7V7 166 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 IGLC6P0CF74 106 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 IGLC1P0CG04 106 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 IFITM1P13164 125 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 IGHV1-2P23083 117 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 CRYBB3P26998 211 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 PSMB8P28062 276 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 RND2P52198 227 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 DIO3P55073 304 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 DAZ2Q13117 558 aaKnown RBP2.35□□□□□ -2.03
PTPRK-220ENST00000531466 CST6Q15828 149 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 CENPWQ5EE01 88 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 KLF17Q5JT82 389 aaPredicted RBP2.35□□□□□ -2.03
PTPRK-220ENST00000531466 ZNF57Q68EA5 555 aaPredicted RBP2.35□□□□□ -2.03
PTPRK-220ENST00000531466 C11orf71Q6IPW1 123 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 TMEM14EPQ6UXP3 125 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 ZNF493Q6ZR52 646 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 VN1R4Q7Z5H5 301 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 DAZ4Q86SG3 579 aaKnown RBP2.35□□□□□ -2.03
PTPRK-220ENST00000531466 PRR15Q8IV56 129 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 EXOC3-AS1Q8N2X6 119 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 YIPF7Q8N8F6 280 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 OR10J6PQ8NGY7 276 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 FGF14Q92915 247 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 KCNS1Q96KK3 526 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 HIST1H4GQ99525 98 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 SLIRPQ9GZT3 109 aaKnown RBP2.35□□□□□ -2.03
PTPRK-220ENST00000531466 DAZ1Q9NQZ3 744 aaKnown RBP2.35□□□□□ -2.03
PTPRK-220ENST00000531466 DAZ3Q9NR90 486 aaKnown RBP2.35□□□□□ -2.03
PTPRK-220ENST00000531466 FKBP11Q9NYL4 201 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 ZNF443Q9Y2A4 671 aaPredicted RBP2.35□□□□□ -2.03
PTPRK-220ENST00000531466 FLVCR1Q9Y5Y0 555 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 CLASP1Q7Z460 1538 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 PHIPQ8WWQ0 1821 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 KIF14Q15058 1648 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 PREX2Q70Z35 1606 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 TRPM1Q7Z4N2 1603 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 ABCA9Q8IUA7 1624 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 PLIN4Q96Q06 1357 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 MYH7P12883 1935 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 IQSEC2Q5JU85 1478 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 RPRD2Q5VT52 1461 aaKnown RBP2.34□□□□□ -2.03
PTPRK-220ENST00000531466 N4BP2Q86UW6 1770 aaPredicted RBP2.34□□□□□ -2.03
PTPRK-220ENST00000531466 IGHV1OR21-1A0A087WYE8 117 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 A0A087X0T9 212 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 CCL15-CCL14A0A0B4J2E2 113 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 A0A0D9SG52 128 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 TRBV7-6A0A0J9YX20 115 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 TLCD2A6NGC4 264 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 C8orf87E5RJ46 101 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 GSTZ1O43708 216 aaPredicted RBP2.34□□□□□ -2.03
PTPRK-220ENST00000531466 EPPINO95925 133 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 FABP4P15090 132 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 CCL1P22362 96 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 PRSS3P35030 304 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 OPRM1P35372 400 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 OPRK1P41145 380 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 GNG11P61952 73 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 FKBP1AP62942 108 aaKnown RBP2.34□□□□□ -2.03
PTPRK-220ENST00000531466 CATR1Q13166 79 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 PNOCQ13519 176 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 RRN3P1Q2M238 152 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 COA6Q5JTJ3 125 aaKnown RBP2.34□□□□□ -2.03
PTPRK-220ENST00000531466 HES3Q5TGS1 186 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 FAM222AQ5U5X8 452 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 Q5XG85 94 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 UFSP1Q6NVU6 142 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 ZNF880Q6PDB4 577 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 CLEC19AQ6UXS0 136 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 DNM1P46Q6ZS02 220 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 Q6ZS49 121 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 ATP5L2Q7Z4Y8 100 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 TRAPPC6BQ86SZ2 158 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 MSRB3Q8IXL7 192 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 TMEM183AQ8IXX5 376 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 ZNF709Q8N972 641 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 SLC25A38Q96DW6 304 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 GNPNAT1Q96EK6 184 aaPredicted RBP2.34□□□□□ -2.03
PTPRK-220ENST00000531466 FAM19A4Q96LR4 140 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 IGF2BP2-AS1Q96M15 143 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 AQP10Q96PS8 301 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 PKMYT1Q99640 499 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 ADAT1Q9BUB4 502 aaKnown RBP2.34□□□□□ -2.03
PTPRK-220ENST00000531466 NAA60Q9H7X0 242 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 TMEM106BQ9NUM4 274 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 TMEM100Q9NV29 134 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 MARCOQ9UEW3 520 aaPredicted RBP2.34□□□□□ -2.03
PTPRK-220ENST00000531466 NUFIP1Q9UHK0 495 aaKnown RBP2.34□□□□□ -2.03
PTPRK-220ENST00000531466 RPUSD1Q9UJJ7 312 aaKnown RBP2.34□□□□□ -2.03
PTPRK-220ENST00000531466 ANAPC10Q9UM13 185 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 TPRKBQ9Y3C4 175 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 REREQ9P2R6 1566 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 CACNA1SQ13698 1873 aa2.34□□□□□ -2.03
PTPRK-220ENST00000531466 MYH11P35749 1972 aa2.34□□□□□ -2.04
PTPRK-220ENST00000531466 BLMP54132 1417 aaPredicted RBP2.34□□□□□ -2.04
PTPRK-220ENST00000531466 KIF20BQ96Q89 1820 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 KDM5CP41229 1560 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 MYH10P35580 1976 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 TRGV10A0A0A0MS01 117 aa2.33□□□□□ -2.04
PTPRK-220ENST00000531466 TRAV8-3A0A0A6YYJ7 113 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms