RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 IGHV2-26A0A0B4J1V2 119 aa4.49□□□□□ -1.69
PCF11-205ENST00000530906 PPIAL4CA0A0B4J2A2 164 aa4.49□□□□□ -1.69
PCF11-205ENST00000530906 SRRM4A7MD48 611 aaKnown RBP4.49□□□□□ -1.69
PCF11-205ENST00000530906 YIF1AO95070 293 aa4.49□□□□□ -1.69
PCF11-205ENST00000530906 IGHV3-7P01780 117 aa4.49□□□□□ -1.69
PCF11-205ENST00000530906 PPIAL4GP0DN37 164 aa4.49□□□□□ -1.69
PCF11-205ENST00000530906 CEBPGP53567 150 aa4.49□□□□□ -1.69
PCF11-205ENST00000530906 FGF8P55075 233 aaPredicted RBP4.49□□□□□ -1.69
PCF11-205ENST00000530906 RPS16P62249 146 aaKnown RBP4.49□□□□□ -1.69
PCF11-205ENST00000530906 HABP2Q14520 560 aaPredicted RBP4.49□□□□□ -1.69
PCF11-205ENST00000530906 AKIRIN2Q53H80 203 aa4.49□□□□□ -1.69
PCF11-205ENST00000530906 SPINK9Q5DT21 86 aa4.49□□□□□ -1.69
PCF11-205ENST00000530906 C11orf71Q6IPW1 123 aa4.49□□□□□ -1.69
PCF11-205ENST00000530906 LYPD2Q6UXB3 125 aa4.49□□□□□ -1.69
PCF11-205ENST00000530906 SPNS3Q6ZMD2 512 aa4.49□□□□□ -1.69
PCF11-205ENST00000530906 ZNF841Q6ZN19 808 aa4.49□□□□□ -1.69
PCF11-205ENST00000530906 SSX7Q7RTT5 188 aa4.49□□□□□ -1.69
PCF11-205ENST00000530906 ZCCHC24Q8N2G6 241 aaKnown RBP4.49□□□□□ -1.69
PCF11-205ENST00000530906 C11orf42Q8N5U0 333 aa4.49□□□□□ -1.69
PCF11-205ENST00000530906 STPG3Q8N7X2 389 aa4.49□□□□□ -1.69
PCF11-205ENST00000530906 LY6G5BQ8NDX9 201 aa4.49□□□□□ -1.69
PCF11-205ENST00000530906 OR1L6Q8NGR2 347 aa4.49□□□□□ -1.69
PCF11-205ENST00000530906 OR4F5Q8NH21 305 aa4.49□□□□□ -1.69
PCF11-205ENST00000530906 UHRF2Q96PU4 802 aa4.49□□□□□ -1.69
PCF11-205ENST00000530906 OR5B12Q96R08 314 aa4.49□□□□□ -1.69
PCF11-205ENST00000530906 OR4F4Q96R69 305 aa4.49□□□□□ -1.69
PCF11-205ENST00000530906 PFDN5Q99471 154 aa4.49□□□□□ -1.69
PCF11-205ENST00000530906 C20orf24Q9BUV8 137 aa4.49□□□□□ -1.69
PCF11-205ENST00000530906 PARLQ9H300 379 aa4.49□□□□□ -1.69
PCF11-205ENST00000530906 PRORYQ9H606 182 aa4.49□□□□□ -1.69
PCF11-205ENST00000530906 PATZ1Q9HBE1 687 aaKnown RBP4.49□□□□□ -1.69
PCF11-205ENST00000530906 TECRQ9NZ01 308 aaKnown RBP4.49□□□□□ -1.69
PCF11-205ENST00000530906 TLN1Q9Y490 2541 aaKnown RBP4.49□□□□□ -1.69
PCF11-205ENST00000530906 ANKHD1Q8IWZ3 2542 aaKnown RBP4.48□□□□□ -1.69
PCF11-205ENST00000530906 TET2Q6N021 2002 aaPredicted RBP4.48□□□□□ -1.69
PCF11-205ENST00000530906 YLPM1P49750 1951 aaKnown RBP4.48□□□□□ -1.69
PCF11-205ENST00000530906 C5orf52A6NGY3 159 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 C9orf118A6NHY6 69 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 C22orf46C9J442 243 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 C9JCJ5 164 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 BUB1B-PAK6H3BSN5 160 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 H7BYZ3 331 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 UBE2CO00762 179 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 PAGE4O60829 102 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 FCN3O75636 299 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 ACTL6BO94805 426 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 IGLV2-23P01705 113 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 SLPIP03973 132 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 OR5G3P0C626 314 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 ARL14EPLP0DKL9 152 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 GCHFRP30047 84 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 SRP14P37108 136 aaKnown RBP4.48□□□□□ -1.69
PCF11-205ENST00000530906 BPIFB3P59826 476 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 LCN2P80188 198 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 RPL19P84098 196 aaKnown RBP4.48□□□□□ -1.69
PCF11-205ENST00000530906 ELOBQ15370 118 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 PRSS8Q16651 343 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 SMUG1Q53HV7 270 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 UTF1Q5T230 341 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 MIC13Q5XKP0 118 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 CCDC144NLQ6NUI1 221 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 KCNIP4Q6PIL6 250 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 SLC16A13Q7RTY0 426 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 S100A7AQ86SG5 101 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 FAM24BQ8N5W8 94 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 THAP8Q8NA92 274 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 STXBP6Q8NFX7 210 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 OR11H6Q8NGC7 330 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 OR1L4Q8NGR5 311 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 OR1P1Q8NH06 330 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 LINC01560Q8TB33 94 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 RPEQ96AT9 228 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 MBD6Q96DN6 1003 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 PYGO2Q9BRQ0 406 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 HINT2Q9BX68 163 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 KRTAP9-8Q9BYQ0 159 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 ZNF430Q9H8G1 570 aaPredicted RBP4.48□□□□□ -1.69
PCF11-205ENST00000530906 FUT9Q9Y231 359 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 INSIG2Q9Y5U4 225 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 PRRC2CQ9Y520 2896 aaKnown RBP4.48□□□□□ -1.69
PCF11-205ENST00000530906 ICE1Q9Y2F5 2266 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 AKAP13Q12802 2813 aa4.48□□□□□ -1.69
PCF11-205ENST00000530906 DMXL1Q9Y485 3027 aa4.47□□□□□ -1.69
PCF11-205ENST00000530906 IGHV1-3A0A0C4DH29 117 aa4.47□□□□□ -1.69
PCF11-205ENST00000530906 A0A1W2PRE2 83 aa4.47□□□□□ -1.69
PCF11-205ENST00000530906 LY6LH3BQJ8 138 aa4.47□□□□□ -1.69
PCF11-205ENST00000530906 AP4M1O00189 453 aa4.47□□□□□ -1.69
PCF11-205ENST00000530906 PLAUP00749 431 aa4.47□□□□□ -1.69
PCF11-205ENST00000530906 IGHV2-5P01817 119 aa4.47□□□□□ -1.69
PCF11-205ENST00000530906 TYMSP04818 313 aa4.47□□□□□ -1.69
PCF11-205ENST00000530906 FABP1P07148 127 aa4.47□□□□□ -1.69
PCF11-205ENST00000530906 CRYGCP07315 174 aa4.47□□□□□ -1.69
PCF11-205ENST00000530906 CRYGBP07316 175 aa4.47□□□□□ -1.69
PCF11-205ENST00000530906 LINC00869P0C866 280 aa4.47□□□□□ -1.69
PCF11-205ENST00000530906 SMIM6P0DI80 62 aa4.47□□□□□ -1.69
PCF11-205ENST00000530906 PRTN3P24158 256 aa4.47□□□□□ -1.69
PCF11-205ENST00000530906 HTR1DP28221 377 aa4.47□□□□□ -1.69
PCF11-205ENST00000530906 AKR1C3P42330 323 aa4.47□□□□□ -1.69
PCF11-205ENST00000530906 GPR6P46095 362 aaPredicted RBP4.47□□□□□ -1.69
PCF11-205ENST00000530906 RPL27AP46776 148 aaKnown RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms