RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 LILRB2Q8N423 598 aa10.87□□□□□ -0.67
CAPN1-219ENST00000530495 DUSP18Q8NEJ0 188 aa10.87□□□□□ -0.67
CAPN1-219ENST00000530495 OR6F1Q8NGZ6 308 aa10.87□□□□□ -0.67
CAPN1-219ENST00000530495 ST8SIA2Q92186 375 aa10.87□□□□□ -0.67
CAPN1-219ENST00000530495 SEC22AQ96IW7 307 aa10.87□□□□□ -0.67
CAPN1-219ENST00000530495 YTHDF1Q9BYJ9 559 aaKnown RBP10.87□□□□□ -0.67
CAPN1-219ENST00000530495 MS4A6AQ9H2W1 248 aa10.87□□□□□ -0.67
CAPN1-219ENST00000530495 LOC100506127A0A0U1RQW1 187 aa10.86□□□□□ -0.67
CAPN1-219ENST00000530495 DNASE2O00115 360 aaPredicted RBP10.86□□□□□ -0.67
CAPN1-219ENST00000530495 ST8SIA3O43173 380 aa10.86□□□□□ -0.67
CAPN1-219ENST00000530495 APOHP02749 345 aaPredicted RBP10.86□□□□□ -0.67
CAPN1-219ENST00000530495 EIF4EP06730 217 aaKnown RBP10.86□□□□□ -0.67
CAPN1-219ENST00000530495 TAS2R46P59540 309 aa10.86□□□□□ -0.67
CAPN1-219ENST00000530495 DEFB131AP59861 70 aa10.86□□□□□ -0.67
CAPN1-219ENST00000530495 PRCDQ00LT1 54 aa10.86□□□□□ -0.67
CAPN1-219ENST00000530495 LEMD1Q68G75 181 aa10.86□□□□□ -0.67
CAPN1-219ENST00000530495 LYSMD2Q8IV50 215 aa10.86□□□□□ -0.67
CAPN1-219ENST00000530495 Q8NAQ8 132 aa10.86□□□□□ -0.67
CAPN1-219ENST00000530495 OR5H2Q8NGV7 314 aa10.86□□□□□ -0.67
CAPN1-219ENST00000530495 FXYD6Q9H0Q3 95 aa10.86□□□□□ -0.67
CAPN1-219ENST00000530495 DNAH10Q8IVF4 4471 aa10.86□□□□□ -0.67
CAPN1-219ENST00000530495 PCLOQ9Y6V0 5065 aa10.85□□□□□ -0.67
CAPN1-219ENST00000530495 GIG44P09565 113 aaPredicted RBP10.85□□□□□ -0.67
CAPN1-219ENST00000530495 RBMY1A1P0DJD3 496 aaKnown RBP10.85□□□□□ -0.67
CAPN1-219ENST00000530495 RBMY1CP0DJD4 496 aa10.85□□□□□ -0.67
CAPN1-219ENST00000530495 HSPE1P61604 102 aaKnown RBP10.85□□□□□ -0.67
CAPN1-219ENST00000530495 RBMY1FQ15415 496 aaKnown RBP10.85□□□□□ -0.67
CAPN1-219ENST00000530495 LPCAT3Q6P1A2 487 aa10.85□□□□□ -0.67
CAPN1-219ENST00000530495 H2BFWTQ7Z2G1 175 aa10.85□□□□□ -0.67
CAPN1-219ENST00000530495 OR4A16Q8NH70 328 aa10.85□□□□□ -0.67
CAPN1-219ENST00000530495 PINX1Q96BK5 328 aaKnown RBP10.85□□□□□ -0.67
CAPN1-219ENST00000530495 TMEM50AO95807 157 aa10.84□□□□□ -0.67
CAPN1-219ENST00000530495 IGKV1-39P01597 117 aa10.84□□□□□ -0.67
CAPN1-219ENST00000530495 IGKV1D-39P04432 117 aa10.84□□□□□ -0.67
CAPN1-219ENST00000530495 NPBWR1P48145 328 aa10.84□□□□□ -0.67
CAPN1-219ENST00000530495 RPL11P62913 178 aaKnown RBP10.84□□□□□ -0.67
CAPN1-219ENST00000530495 ERHP84090 104 aaKnown RBP10.84□□□□□ -0.67
CAPN1-219ENST00000530495 PHLDA2Q53GA4 152 aa10.84□□□□□ -0.67
CAPN1-219ENST00000530495 TMEM41BQ5BJD5 291 aa10.84□□□□□ -0.67
CAPN1-219ENST00000530495 ZNF600Q6ZNG1 722 aa10.84□□□□□ -0.67
CAPN1-219ENST00000530495 CROCCP3Q8IVE0 287 aa10.84□□□□□ -0.67
CAPN1-219ENST00000530495 STHQ8IWL8 128 aa10.84□□□□□ -0.67
CAPN1-219ENST00000530495 FAM24BQ8N5W8 94 aa10.84□□□□□ -0.67
CAPN1-219ENST00000530495 ZFAND3Q9H8U3 227 aa10.84□□□□□ -0.67
CAPN1-219ENST00000530495 PUS1Q9Y606 427 aaKnown RBP eCLIP10.84□□□□□ -0.67
CAPN1-219ENST00000530495 IGHV3-66A0A0C4DH42 116 aa10.83□□□□□ -0.68
CAPN1-219ENST00000530495 MIFP14174 115 aa10.83□□□□□ -0.68
CAPN1-219ENST00000530495 S100GP29377 79 aa10.83□□□□□ -0.68
CAPN1-219ENST00000530495 PRSS3P35030 304 aa10.83□□□□□ -0.68
CAPN1-219ENST00000530495 HRH1P35367 487 aa10.83□□□□□ -0.68
CAPN1-219ENST00000530495 TAS2R20P59543 309 aa10.83□□□□□ -0.68
CAPN1-219ENST00000530495 UBE2NLQ5JXB2 153 aa10.83□□□□□ -0.68
CAPN1-219ENST00000530495 TMEM69Q5SWH9 247 aa10.83□□□□□ -0.68
CAPN1-219ENST00000530495 TBC1D26Q86UD7 250 aa10.83□□□□□ -0.68
CAPN1-219ENST00000530495 AGRNO00468 2067 aa10.82□□□□□ -0.68
CAPN1-219ENST00000530495 IGHV4-28A0A0C4DH34 117 aa10.82□□□□□ -0.68
CAPN1-219ENST00000530495 A0A1B0GU03 582 aa10.82□□□□□ -0.68
CAPN1-219ENST00000530495 NPPCP23582 126 aa10.82□□□□□ -0.68
CAPN1-219ENST00000530495 HLA-DMAP28067 261 aa10.82□□□□□ -0.68
CAPN1-219ENST00000530495 HLA-DMBP28068 263 aa10.82□□□□□ -0.68
CAPN1-219ENST00000530495 PVRIGQ6DKI7 326 aa10.82□□□□□ -0.68
CAPN1-219ENST00000530495 MORN3Q6PF18 240 aaPredicted RBP10.82□□□□□ -0.68
CAPN1-219ENST00000530495 LINC00336Q6ZUF6 198 aa10.82□□□□□ -0.68
CAPN1-219ENST00000530495 TRPT1Q86TN4 253 aaKnown RBP10.82□□□□□ -0.68
CAPN1-219ENST00000530495 TMEM231Q9H6L2 316 aa10.82□□□□□ -0.68
CAPN1-219ENST00000530495 KIAA1109Q2LD37 5005 aa10.81□□□□□ -0.68
CAPN1-219ENST00000530495 VPS13DQ5THJ4 4388 aa10.81□□□□□ -0.68
CAPN1-219ENST00000530495 TRAV10A0A0B4J240 114 aa10.81□□□□□ -0.68
CAPN1-219ENST00000530495 A0A1W2PS18 150 aa10.81□□□□□ -0.68
CAPN1-219ENST00000530495 ZNF705EA8MWA4 302 aaPredicted RBP10.81□□□□□ -0.68
CAPN1-219ENST00000530495 INS-IGF2F8WCM5 200 aa10.81□□□□□ -0.68
CAPN1-219ENST00000530495 K7EQG2 157 aa10.81□□□□□ -0.68
CAPN1-219ENST00000530495 SPP1P10451 314 aa10.81□□□□□ -0.68
CAPN1-219ENST00000530495 SNCAP37840 140 aa10.81□□□□□ -0.68
CAPN1-219ENST00000530495 UCP3P55916 312 aa10.81□□□□□ -0.68
CAPN1-219ENST00000530495 TSPAN5P62079 268 aa10.81□□□□□ -0.68
CAPN1-219ENST00000530495 SAMD12Q8N8I0 201 aa10.81□□□□□ -0.68
CAPN1-219ENST00000530495 MRGPRFQ96AM1 343 aa10.81□□□□□ -0.68
CAPN1-219ENST00000530495 GRAMD2BQ96HH9 432 aa10.81□□□□□ -0.68
CAPN1-219ENST00000530495 RABAC1Q9UI14 185 aa10.81□□□□□ -0.68
CAPN1-219ENST00000530495 IGHV4-4A0A075B6R2 117 aa10.8□□□□□ -0.68
CAPN1-219ENST00000530495 ELOA3CA0A087WX78 387 aaPredicted RBP10.8□□□□□ -0.68
CAPN1-219ENST00000530495 RPS19P39019 145 aaKnown RBP10.8□□□□□ -0.68
CAPN1-219ENST00000530495 Q6ZTC4 211 aa10.8□□□□□ -0.68
CAPN1-219ENST00000530495 CSNK1G2-AS1Q8NCQ2 148 aa10.8□□□□□ -0.68
CAPN1-219ENST00000530495 GPX8Q8TED1 209 aa10.8□□□□□ -0.68
CAPN1-219ENST00000530495 Q9H521 79 aa10.8□□□□□ -0.68
CAPN1-219ENST00000530495 X6R8D5 127 aa10.8□□□□□ -0.68
CAPN1-219ENST00000530495 HECTD4Q9Y4D8 3996 aa10.8□□□□□ -0.68
CAPN1-219ENST00000530495 A0A1B0GVY2 172 aa10.79□□□□□ -0.68
CAPN1-219ENST00000530495 CORTO00230 105 aa10.79□□□□□ -0.68
CAPN1-219ENST00000530495 CRYBB3P26998 211 aa10.79□□□□□ -0.68
CAPN1-219ENST00000530495 TGFBR1P36897 503 aa10.79□□□□□ -0.68
CAPN1-219ENST00000530495 SUB1P53999 127 aaKnown RBP eCLIP10.79□□□□□ -0.68
CAPN1-219ENST00000530495 NEDD8Q15843 81 aa10.79□□□□□ -0.68
CAPN1-219ENST00000530495 IZUMO4Q1ZYL8 232 aa10.79□□□□□ -0.68
CAPN1-219ENST00000530495 SPINK9Q5DT21 86 aa10.79□□□□□ -0.68
CAPN1-219ENST00000530495 CENPSQ8N2Z9 138 aa10.79□□□□□ -0.68
CAPN1-219ENST00000530495 RNF126Q9BV68 326 aa10.79□□□□□ -0.68
CAPN1-219ENST00000530495 A0A0B4J293 547 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms