RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 M0R1B8 84 aa11.65□□□□□ -0.54
USP48-213ENST00000529637 SPRY3O43610 288 aa11.65□□□□□ -0.54
USP48-213ENST00000529637 PROP1O75360 226 aa11.65□□□□□ -0.54
USP48-213ENST00000529637 MPV17L2Q567V2 206 aa11.65□□□□□ -0.54
USP48-213ENST00000529637 ZNRF1Q8ND25 227 aa11.65□□□□□ -0.54
USP48-213ENST00000529637 ZC2HC1AQ96GY0 325 aa11.65□□□□□ -0.54
USP48-213ENST00000529637 IGHV1-69-2A0A0G2JMI3 117 aa11.65□□□□□ -0.54
USP48-213ENST00000529637 PSG1P11464 419 aa11.65□□□□□ -0.54
USP48-213ENST00000529637 WT1P19544 449 aaPredicted RBP11.65□□□□□ -0.54
USP48-213ENST00000529637 GPR6P46095 362 aaPredicted RBP11.65□□□□□ -0.54
USP48-213ENST00000529637 RPL39P5Q59GN2 51 aa11.65□□□□□ -0.54
USP48-213ENST00000529637 FAM201AQ5SY85 155 aa11.65□□□□□ -0.54
USP48-213ENST00000529637 HSD17B10Q99714 261 aaKnown RBP11.65□□□□□ -0.54
USP48-213ENST00000529637 VPS25Q9BRG1 176 aa11.65□□□□□ -0.54
USP48-213ENST00000529637 ZFHX2Q9C0A1 2572 aaPredicted RBP11.65□□□□□ -0.54
USP48-213ENST00000529637 APCSP02743 223 aa11.65□□□□□ -0.54
USP48-213ENST00000529637 MT-ND6P03923 174 aa11.65□□□□□ -0.54
USP48-213ENST00000529637 MGST1P10620 155 aaKnown RBP11.65□□□□□ -0.54
USP48-213ENST00000529637 ERVK-16P61578 105 aa11.65□□□□□ -0.54
USP48-213ENST00000529637 WDR73Q6P4I2 378 aa11.65□□□□□ -0.54
USP48-213ENST00000529637 MUC15Q8N387 334 aa11.65□□□□□ -0.54
USP48-213ENST00000529637 DEFB108BQ8NET1 73 aa11.65□□□□□ -0.54
USP48-213ENST00000529637 PIEZO2Q9H5I5 2752 aa11.65□□□□□ -0.55
USP48-213ENST00000529637 IGHV1-18A0A0C4DH31 117 aa11.64□□□□□ -0.55
USP48-213ENST00000529637 PRR33A8MZF0 331 aa11.64□□□□□ -0.55
USP48-213ENST00000529637 GFRA3O60609 400 aa11.64□□□□□ -0.55
USP48-213ENST00000529637 PSG5Q15238 335 aa11.64□□□□□ -0.55
USP48-213ENST00000529637 GDF5OSQ5U4N7 250 aa11.64□□□□□ -0.55
USP48-213ENST00000529637 MOGAT3Q86VF5 341 aa11.64□□□□□ -0.55
USP48-213ENST00000529637 TRAV9-2A0A087WT02 112 aa11.64□□□□□ -0.55
USP48-213ENST00000529637 A0A1W2PN81 502 aa11.64□□□□□ -0.55
USP48-213ENST00000529637 FAM181BA6NEQ2 426 aa11.64□□□□□ -0.55
USP48-213ENST00000529637 SH2D7A6NKC9 451 aaPredicted RBP11.64□□□□□ -0.55
USP48-213ENST00000529637 AMY1AP04745 511 aa11.64□□□□□ -0.55
USP48-213ENST00000529637 PMCHL1Q16048 86 aa11.64□□□□□ -0.55
USP48-213ENST00000529637 C19orf35Q6ZS72 473 aa11.64□□□□□ -0.55
USP48-213ENST00000529637 BHLHA15Q7RTS1 189 aaPredicted RBP11.64□□□□□ -0.55
USP48-213ENST00000529637 SPACA3Q8IXA5 215 aa11.64□□□□□ -0.55
USP48-213ENST00000529637 CLEC5AQ9NY25 188 aa11.64□□□□□ -0.55
USP48-213ENST00000529637 LSM4Q9Y4Z0 139 aaKnown RBP11.64□□□□□ -0.55
USP48-213ENST00000529637 OR2T8A6NH00 312 aa11.64□□□□□ -0.55
USP48-213ENST00000529637 MPDU1O75352 247 aa11.64□□□□□ -0.55
USP48-213ENST00000529637 IGLV2-8P01709 118 aa11.64□□□□□ -0.55
USP48-213ENST00000529637 IGHG3P01860 377 aa11.64□□□□□ -0.55
USP48-213ENST00000529637 FAM216AQ8WUB2 273 aa11.64□□□□□ -0.55
USP48-213ENST00000529637 LINC00479Q96M42 142 aa11.64□□□□□ -0.55
USP48-213ENST00000529637 H0YJW9 148 aa11.63□□□□□ -0.55
USP48-213ENST00000529637 OR10J4P0C629 311 aa11.63□□□□□ -0.55
USP48-213ENST00000529637 USF1P22415 310 aaPredicted RBP11.63□□□□□ -0.55
USP48-213ENST00000529637 GATA2P23769 480 aaPredicted RBP11.63□□□□□ -0.55
USP48-213ENST00000529637 VDAC2P45880 294 aaPredicted RBP11.63□□□□□ -0.55
USP48-213ENST00000529637 BPIFB3P59826 476 aa11.63□□□□□ -0.55
USP48-213ENST00000529637 RPL8P62917 257 aaKnown RBP11.63□□□□□ -0.55
USP48-213ENST00000529637 PPP1R35Q8TAP8 253 aa11.63□□□□□ -0.55
USP48-213ENST00000529637 SSBP4Q9BWG4 385 aaPredicted RBP11.63□□□□□ -0.55
USP48-213ENST00000529637 CST9LQ9H4G1 147 aa11.63□□□□□ -0.55
USP48-213ENST00000529637 GSX1Q9H4S2 264 aaPredicted RBP11.63□□□□□ -0.55
USP48-213ENST00000529637 TNCP24821 2201 aa11.63□□□□□ -0.55
USP48-213ENST00000529637 PTPRBP23467 1997 aa11.63□□□□□ -0.55
USP48-213ENST00000529637 DCHS1Q96JQ0 3298 aa11.63□□□□□ -0.55
USP48-213ENST00000529637 ZNF891A8MT65 544 aaPredicted RBP11.63□□□□□ -0.55
USP48-213ENST00000529637 FTH1P19P0C7X4 201 aa11.63□□□□□ -0.55
USP48-213ENST00000529637 IGFBP2P18065 325 aa11.63□□□□□ -0.55
USP48-213ENST00000529637 SELENOVP59797 346 aa11.63□□□□□ -0.55
USP48-213ENST00000529637 IBA57Q5T440 356 aaKnown RBP11.63□□□□□ -0.55
USP48-213ENST00000529637 OR2V2Q96R30 315 aa11.63□□□□□ -0.55
USP48-213ENST00000529637 GCM1Q9NP62 436 aa11.63□□□□□ -0.55
USP48-213ENST00000529637 M0R2Z0 102 aa11.62□□□□□ -0.55
USP48-213ENST00000529637 HSBP1O75506 76 aa11.62□□□□□ -0.55
USP48-213ENST00000529637 REG1AP05451 166 aa11.62□□□□□ -0.55
USP48-213ENST00000529637 ADH4P08319 380 aa11.62□□□□□ -0.55
USP48-213ENST00000529637 MOB3BQ86TA1 216 aa11.62□□□□□ -0.55
USP48-213ENST00000529637 SELENOKQ9Y6D0 94 aa11.62□□□□□ -0.55
USP48-213ENST00000529637 LY96Q9Y6Y9 160 aa11.62□□□□□ -0.55
USP48-213ENST00000529637 C2orf70A6NJV1 201 aa11.62□□□□□ -0.55
USP48-213ENST00000529637 GGTLC3B5MD39 225 aa11.62□□□□□ -0.55
USP48-213ENST00000529637 TAX1BP3O14907 124 aa11.62□□□□□ -0.55
USP48-213ENST00000529637 MYOD1P15172 320 aa11.62□□□□□ -0.55
USP48-213ENST00000529637 RHOBP62745 196 aa11.62□□□□□ -0.55
USP48-213ENST00000529637 SLC24A4Q8NFF2 622 aa11.62□□□□□ -0.55
USP48-213ENST00000529637 ZNF503Q96F45 646 aa11.62□□□□□ -0.55
USP48-213ENST00000529637 S1PR3Q99500 378 aa11.62□□□□□ -0.55
USP48-213ENST00000529637 TRAV30A0A087WSZ9 112 aa11.62□□□□□ -0.55
USP48-213ENST00000529637 HLA-DQA1P01909 254 aa11.62□□□□□ -0.55
USP48-213ENST00000529637 PPBPP02775 128 aa11.62□□□□□ -0.55
USP48-213ENST00000529637 DUTP33316 252 aaKnown RBP11.62□□□□□ -0.55
USP48-213ENST00000529637 CA7P43166 264 aa11.62□□□□□ -0.55
USP48-213ENST00000529637 OCIAD2Q56VL3 154 aa11.62□□□□□ -0.55
USP48-213ENST00000529637 OR2D3Q8NGH3 330 aa11.62□□□□□ -0.55
USP48-213ENST00000529637 PRR7Q8TB68 274 aa11.62□□□□□ -0.55
USP48-213ENST00000529637 POLEQ07864 2286 aa11.61□□□□□ -0.55
USP48-213ENST00000529637 IGKV1D-17A0A075B6S4 117 aa11.61□□□□□ -0.55
USP48-213ENST00000529637 SMIM27A0A1W2PRY6 76 aa11.61□□□□□ -0.55
USP48-213ENST00000529637 CD24P25063 80 aa11.61□□□□□ -0.55
USP48-213ENST00000529637 SPRNQ5BIV9 151 aa11.61□□□□□ -0.55
USP48-213ENST00000529637 RNASEKQ6P5S7 137 aaKnown RBP11.61□□□□□ -0.55
USP48-213ENST00000529637 NPVFQ9HCQ7 196 aa11.61□□□□□ -0.55
USP48-213ENST00000529637 OSTCQ9NRP0 149 aa11.61□□□□□ -0.55
USP48-213ENST00000529637 WASHC3Q9Y3C0 194 aa11.61□□□□□ -0.55
USP48-213ENST00000529637 MZT1Q08AG7 82 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms