RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 TMEM17Q86X19 198 aa13.52□□□□□ -0.25
SSRP1-204ENST00000529002 ZBTB34Q8NCN2 500 aa13.52□□□□□ -0.25
SSRP1-204ENST00000529002 PINX1Q96BK5 328 aaKnown RBP13.52□□□□□ -0.25
SSRP1-204ENST00000529002 GINS3Q9BRX5 216 aa13.52□□□□□ -0.25
SSRP1-204ENST00000529002 A0A1B0GU03 582 aa13.51□□□□□ -0.25
SSRP1-204ENST00000529002 KRASP01116 189 aa13.51□□□□□ -0.25
SSRP1-204ENST00000529002 CD5P06127 495 aa13.51□□□□□ -0.25
SSRP1-204ENST00000529002 FGF2P09038 288 aa13.51□□□□□ -0.25
SSRP1-204ENST00000529002 ARPC4P59998 168 aa13.51□□□□□ -0.25
SSRP1-204ENST00000529002 ERVK-16P61578 105 aa13.51□□□□□ -0.25
SSRP1-204ENST00000529002 ARL6IP1Q15041 203 aa13.51□□□□□ -0.25
SSRP1-204ENST00000529002 BEST4Q8NFU0 473 aa13.51□□□□□ -0.25
SSRP1-204ENST00000529002 OR1P1Q8NH06 330 aa13.51□□□□□ -0.25
SSRP1-204ENST00000529002 ACOT13Q9NPJ3 140 aa13.51□□□□□ -0.25
SSRP1-204ENST00000529002 COMMD9Q9P000 198 aa13.51□□□□□ -0.25
SSRP1-204ENST00000529002 XCL2Q9UBD3 114 aa13.51□□□□□ -0.25
SSRP1-204ENST00000529002 PUS1Q9Y606 427 aaKnown RBP eCLIP13.51□□□□□ -0.25
SSRP1-204ENST00000529002 TRAV1-2A0A0B4J238 106 aa13.5□□□□□ -0.25
SSRP1-204ENST00000529002 RAB3BP20337 219 aa13.5□□□□□ -0.25
SSRP1-204ENST00000529002 LPAR6P43657 344 aa13.5□□□□□ -0.25
SSRP1-204ENST00000529002 RCN1Q15293 331 aa13.5□□□□□ -0.25
SSRP1-204ENST00000529002 FCAMRQ8WWV6 532 aa13.5□□□□□ -0.25
SSRP1-204ENST00000529002 MGLLQ99685 303 aa13.5□□□□□ -0.25
SSRP1-204ENST00000529002 TXN2Q99757 166 aa13.5□□□□□ -0.25
SSRP1-204ENST00000529002 DNAH5Q8TE73 4624 aa13.49□□□□□ -0.25
SSRP1-204ENST00000529002 SCN3BQ9NY72 215 aa13.49□□□□□ -0.25
SSRP1-204ENST00000529002 DMBT1Q9UGM3 2413 aaPredicted RBP13.49□□□□□ -0.25
SSRP1-204ENST00000529002 ERICH4A6NGS2 130 aa13.48□□□□□ -0.25
SSRP1-204ENST00000529002 SNAPC5O75971 98 aa13.48□□□□□ -0.25
SSRP1-204ENST00000529002 RLN1P04808 185 aa13.48□□□□□ -0.25
SSRP1-204ENST00000529002 HTN3P15516 51 aa13.48□□□□□ -0.25
SSRP1-204ENST00000529002 PPP5CP53041 499 aa13.48□□□□□ -0.25
SSRP1-204ENST00000529002 DCANP1Q8TF63 244 aa13.48□□□□□ -0.25
SSRP1-204ENST00000529002 MOB3AQ96BX8 217 aa13.48□□□□□ -0.25
SSRP1-204ENST00000529002 GRAMD2BQ96HH9 432 aa13.48□□□□□ -0.25
SSRP1-204ENST00000529002 TMEM56Q96MV1 263 aa13.48□□□□□ -0.25
SSRP1-204ENST00000529002 RAB40CQ96S21 281 aa13.48□□□□□ -0.25
SSRP1-204ENST00000529002 CASQ2O14958 399 aaPredicted RBP13.47□□□□□ -0.25
SSRP1-204ENST00000529002 MYL9P24844 172 aa13.47□□□□□ -0.25
SSRP1-204ENST00000529002 GNRHRP30968 328 aa13.47□□□□□ -0.25
SSRP1-204ENST00000529002 RNF212Q495C1 297 aa13.47□□□□□ -0.25
SSRP1-204ENST00000529002 CCDC90BQ9GZT6 254 aa13.47□□□□□ -0.25
SSRP1-204ENST00000529002 C8orf4Q9NR00 106 aa13.47□□□□□ -0.25
SSRP1-204ENST00000529002 F2RP25116 425 aa13.46□□□□□ -0.25
SSRP1-204ENST00000529002 P2RY1P47900 373 aa13.46□□□□□ -0.25
SSRP1-204ENST00000529002 PSMG4Q5JS54 123 aa13.46□□□□□ -0.25
SSRP1-204ENST00000529002 ZNF600Q6ZNG1 722 aa13.46□□□□□ -0.25
SSRP1-204ENST00000529002 DUSP21Q9H596 190 aa13.46□□□□□ -0.25
SSRP1-204ENST00000529002 PRNDQ9UKY0 176 aa13.46□□□□□ -0.25
SSRP1-204ENST00000529002 RGS10O43665 173 aa13.45□□□□□ -0.26
SSRP1-204ENST00000529002 SPART-AS1P0CW21 52 aa13.45□□□□□ -0.26
SSRP1-204ENST00000529002 NPPCP23582 126 aa13.45□□□□□ -0.26
SSRP1-204ENST00000529002 SPINK9Q5DT21 86 aa13.45□□□□□ -0.26
SSRP1-204ENST00000529002 C22orf42Q6IC83 251 aa13.45□□□□□ -0.26
SSRP1-204ENST00000529002 HOGA1Q86XE5 327 aa13.45□□□□□ -0.26
SSRP1-204ENST00000529002 PGLYRP1O75594 196 aaPredicted RBP13.44□□□□□ -0.26
SSRP1-204ENST00000529002 TMEM50AO95807 157 aa13.44□□□□□ -0.26
SSRP1-204ENST00000529002 FXYD7P58549 80 aa13.44□□□□□ -0.26
SSRP1-204ENST00000529002 TPRA1Q86W33 373 aa13.44□□□□□ -0.26
SSRP1-204ENST00000529002 LGALS14Q8TCE9 139 aa13.44□□□□□ -0.26
SSRP1-204ENST00000529002 TMEM231Q9H6L2 316 aa13.44□□□□□ -0.26
SSRP1-204ENST00000529002 MRPL36Q9P0J6 103 aaKnown RBP13.44□□□□□ -0.26
SSRP1-204ENST00000529002 TRAV18A0A075B6X5 111 aa13.43□□□□□ -0.26
SSRP1-204ENST00000529002 IGHV3OR16-12A0A075B7B8 117 aa13.43□□□□□ -0.26
SSRP1-204ENST00000529002 MEIS3P1A6NDR6 274 aa13.43□□□□□ -0.26
SSRP1-204ENST00000529002 DHRS2Q13268 280 aa13.43□□□□□ -0.26
SSRP1-204ENST00000529002 OGFRL1Q5TC84 451 aaPredicted RBP13.43□□□□□ -0.26
SSRP1-204ENST00000529002 FAM222AQ5U5X8 452 aa13.43□□□□□ -0.26
SSRP1-204ENST00000529002 TMEM88Q6PEY1 159 aa13.43□□□□□ -0.26
SSRP1-204ENST00000529002 ZNF367Q7RTV3 350 aa13.43□□□□□ -0.26
SSRP1-204ENST00000529002 SPATA12Q7Z6I5 190 aa13.43□□□□□ -0.26
SSRP1-204ENST00000529002 DEFB1P60022 68 aa13.42□□□□□ -0.26
SSRP1-204ENST00000529002 ZNF705AQ6ZN79 300 aaPredicted RBP13.42□□□□□ -0.26
SSRP1-204ENST00000529002 ZNF114Q8NC26 417 aa13.42□□□□□ -0.26
SSRP1-204ENST00000529002 FAM210BQ96KR6 192 aa13.42□□□□□ -0.26
SSRP1-204ENST00000529002 YTHDF1Q9BYJ9 559 aaKnown RBP13.42□□□□□ -0.26
SSRP1-204ENST00000529002 DKK2Q9UBU2 259 aa13.42□□□□□ -0.26
SSRP1-204ENST00000529002 DAPK2Q9UIK4 370 aa13.42□□□□□ -0.26
SSRP1-204ENST00000529002 TPRKBQ9Y3C4 175 aa13.42□□□□□ -0.26
SSRP1-204ENST00000529002 TRDV1A0A1B0GX56 115 aa13.41□□□□□ -0.26
SSRP1-204ENST00000529002 A0A1W2PS18 150 aa13.41□□□□□ -0.26
SSRP1-204ENST00000529002 HELTA6NFD8 242 aa13.41□□□□□ -0.26
SSRP1-204ENST00000529002 CRYBB3P26998 211 aa13.41□□□□□ -0.26
SSRP1-204ENST00000529002 NPBWR1P48145 328 aa13.41□□□□□ -0.26
SSRP1-204ENST00000529002 HERV-K104P61576 105 aa13.41□□□□□ -0.26
SSRP1-204ENST00000529002 MLANAQ16655 118 aa13.41□□□□□ -0.26
SSRP1-204ENST00000529002 C6orf223Q8N319 242 aa13.41□□□□□ -0.26
SSRP1-204ENST00000529002 TSPAN14Q8NG11 270 aa13.41□□□□□ -0.26
SSRP1-204ENST00000529002 OR5H6Q8NGV6 325 aa13.41□□□□□ -0.26
SSRP1-204ENST00000529002 METTL26Q96S19 204 aa13.41□□□□□ -0.26
SSRP1-204ENST00000529002 NIPSNAP3BQ9BS92 247 aa13.41□□□□□ -0.26
SSRP1-204ENST00000529002 RHBDL2Q9NX52 303 aa13.41□□□□□ -0.26
SSRP1-204ENST00000529002 FKBP11Q9NYL4 201 aa13.41□□□□□ -0.26
SSRP1-204ENST00000529002 NOTOA8MTQ0 251 aa13.4□□□□□ -0.26
SSRP1-204ENST00000529002 ZNF705FA8MVS1 300 aaPredicted RBP13.4□□□□□ -0.26
SSRP1-204ENST00000529002 H3BMM0 161 aa13.4□□□□□ -0.26
SSRP1-204ENST00000529002 ZNF705DP0CH99 300 aaPredicted RBP13.4□□□□□ -0.26
SSRP1-204ENST00000529002 ZNF705BP0CI00 300 aaPredicted RBP13.4□□□□□ -0.26
SSRP1-204ENST00000529002 PRCDQ00LT1 54 aa13.4□□□□□ -0.26
SSRP1-204ENST00000529002 IZUMO4Q1ZYL8 232 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms