RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 MRPL20Q9BYC9 149 aaKnown RBP6.79□□□□□ -1.32
CSTF3-208ENST00000528865 COMMD5Q9GZQ3 224 aa6.79□□□□□ -1.32
CSTF3-208ENST00000528865 DCAF16Q9NXF7 216 aa6.79□□□□□ -1.32
CSTF3-208ENST00000528865 MYO15AQ9UKN7 3530 aa6.79□□□□□ -1.32
CSTF3-208ENST00000528865 IZUMO1RA6ND01 250 aa6.78□□□□□ -1.32
CSTF3-208ENST00000528865 DPRXA6NFQ7 191 aa6.78□□□□□ -1.32
CSTF3-208ENST00000528865 SNURFLB1AK76 121 aa6.78□□□□□ -1.32
CSTF3-208ENST00000528865 FCN1O00602 326 aa6.78□□□□□ -1.32
CSTF3-208ENST00000528865 FCN3O75636 299 aa6.78□□□□□ -1.32
CSTF3-208ENST00000528865 SERF1AO75920 110 aa6.78□□□□□ -1.32
CSTF3-208ENST00000528865 FSTL3O95633 263 aa6.78□□□□□ -1.32
CSTF3-208ENST00000528865 IGLV2-23P01705 113 aa6.78□□□□□ -1.32
CSTF3-208ENST00000528865 CRYGCP07315 174 aa6.78□□□□□ -1.32
CSTF3-208ENST00000528865 SNRPCP09234 159 aaKnown RBP6.78□□□□□ -1.32
CSTF3-208ENST00000528865 FRMD6-AS1P0C7T7 363 aa6.78□□□□□ -1.32
CSTF3-208ENST00000528865 RNF224P0DH78 156 aa6.78□□□□□ -1.32
CSTF3-208ENST00000528865 RAB4AP20338 218 aa6.78□□□□□ -1.32
CSTF3-208ENST00000528865 GATA2P23769 480 aaPredicted RBP6.78□□□□□ -1.32
CSTF3-208ENST00000528865 MYCNOSP40205 109 aa6.78□□□□□ -1.32
CSTF3-208ENST00000528865 IER3P46695 156 aa6.78□□□□□ -1.32
CSTF3-208ENST00000528865 DLX6P56179 175 aa6.78□□□□□ -1.32
CSTF3-208ENST00000528865 NUTF2P61970 127 aaKnown RBP6.78□□□□□ -1.32
CSTF3-208ENST00000528865 SUMO1P63165 101 aaKnown RBP6.78□□□□□ -1.32
CSTF3-208ENST00000528865 PAX2Q02962 417 aa6.78□□□□□ -1.32
CSTF3-208ENST00000528865 ADIPOQQ15848 244 aa6.78□□□□□ -1.32
CSTF3-208ENST00000528865 TPTE2P1Q5T6R2 138 aa6.78□□□□□ -1.32
CSTF3-208ENST00000528865 ALKBH2Q6NS38 261 aa6.78□□□□□ -1.32
CSTF3-208ENST00000528865 RASL11AQ6T310 242 aa6.78□□□□□ -1.32
CSTF3-208ENST00000528865 OR8I2Q8N0Y5 310 aa6.78□□□□□ -1.32
CSTF3-208ENST00000528865 OR1L4Q8NGR5 311 aa6.78□□□□□ -1.32
CSTF3-208ENST00000528865 OR2T6Q8NHC8 308 aa6.78□□□□□ -1.32
CSTF3-208ENST00000528865 VSTM2AQ8TAG5 236 aa6.78□□□□□ -1.32
CSTF3-208ENST00000528865 WIPF2Q8TF74 440 aaPredicted RBP6.78□□□□□ -1.32
CSTF3-208ENST00000528865 FLYWCH2Q96CP2 140 aaKnown RBP6.78□□□□□ -1.32
CSTF3-208ENST00000528865 SNRNP40Q96DI7 357 aaKnown RBP6.78□□□□□ -1.32
CSTF3-208ENST00000528865 FAM122AQ96E09 287 aa6.78□□□□□ -1.32
CSTF3-208ENST00000528865 WFIKKN1Q96NZ8 548 aa6.78□□□□□ -1.32
CSTF3-208ENST00000528865 TBX15Q96SF7 602 aa6.78□□□□□ -1.32
CSTF3-208ENST00000528865 JKAMPQ9P055 326 aa6.78□□□□□ -1.32
CSTF3-208ENST00000528865 CDC42EP3Q9UKI2 254 aa6.78□□□□□ -1.32
CSTF3-208ENST00000528865 TANC2Q9HCD6 1990 aa6.77□□□□□ -1.33
CSTF3-208ENST00000528865 IGKV1D-37A0A075B6S9 117 aa6.77□□□□□ -1.33
CSTF3-208ENST00000528865 PPIAL4EA0A075B759 164 aa6.77□□□□□ -1.33
CSTF3-208ENST00000528865 TCRBV4S1A1TA0A5B7 111 aa6.77□□□□□ -1.33
CSTF3-208ENST00000528865 GRIFINA4D1Z8 144 aa6.77□□□□□ -1.33
CSTF3-208ENST00000528865 ZNF705FA8MVS1 300 aaPredicted RBP6.77□□□□□ -1.33
CSTF3-208ENST00000528865 E7EUB6 86 aa6.77□□□□□ -1.33
CSTF3-208ENST00000528865 PPIAL4DF5H284 164 aa6.77□□□□□ -1.33
CSTF3-208ENST00000528865 C16orf97H3BN30 126 aa6.77□□□□□ -1.33
CSTF3-208ENST00000528865 TMEM178BH3BS89 294 aa6.77□□□□□ -1.33
CSTF3-208ENST00000528865 M0R143 59 aa6.77□□□□□ -1.33
CSTF3-208ENST00000528865 OR7C2O60412 319 aa6.77□□□□□ -1.33
CSTF3-208ENST00000528865 AMY1AP04745 511 aa6.77□□□□□ -1.33
CSTF3-208ENST00000528865 GPX1P07203 203 aa6.77□□□□□ -1.33
CSTF3-208ENST00000528865 ZNF705DP0CH99 300 aaPredicted RBP6.77□□□□□ -1.33
CSTF3-208ENST00000528865 ZNF705BP0CI00 300 aaPredicted RBP6.77□□□□□ -1.33
CSTF3-208ENST00000528865 PPIAL4FP0DN26 164 aa6.77□□□□□ -1.33
CSTF3-208ENST00000528865 COMPP49747 757 aaPredicted RBP6.77□□□□□ -1.33
CSTF3-208ENST00000528865 SUB1P53999 127 aaKnown RBP eCLIP6.77□□□□□ -1.33
CSTF3-208ENST00000528865 MRGPRG-AS1Q2M3A8 158 aa6.77□□□□□ -1.33
CSTF3-208ENST00000528865 TMEM108Q6UXF1 575 aa6.77□□□□□ -1.33
CSTF3-208ENST00000528865 PATE2Q6UY27 113 aa6.77□□□□□ -1.33
CSTF3-208ENST00000528865 DMRTC2Q8IXT2 367 aaPredicted RBP6.77□□□□□ -1.33
CSTF3-208ENST00000528865 ZCCHC24Q8N2G6 241 aaKnown RBP6.77□□□□□ -1.33
CSTF3-208ENST00000528865 Q8N976 141 aa6.77□□□□□ -1.33
CSTF3-208ENST00000528865 OR10W1Q8NGF6 305 aa6.77□□□□□ -1.33
CSTF3-208ENST00000528865 OR4C13Q8NGP0 309 aa6.77□□□□□ -1.33
CSTF3-208ENST00000528865 HARBI1Q96MB7 349 aa6.77□□□□□ -1.33
CSTF3-208ENST00000528865 NEU1Q99519 415 aa6.77□□□□□ -1.33
CSTF3-208ENST00000528865 SNHG12Q9BXW3 62 aa6.77□□□□□ -1.33
CSTF3-208ENST00000528865 ZNF430Q9H8G1 570 aaPredicted RBP6.77□□□□□ -1.33
CSTF3-208ENST00000528865 ZNRD1Q9P1U0 126 aa6.77□□□□□ -1.33
CSTF3-208ENST00000528865 KAAG1Q9UBP8 84 aa6.77□□□□□ -1.33
CSTF3-208ENST00000528865 PPIAL4AQ9Y536 164 aa6.77□□□□□ -1.33
CSTF3-208ENST00000528865 TRAV5A0A0B4J249 113 aa6.76□□□□□ -1.33
CSTF3-208ENST00000528865 M0QZK8 103 aa6.76□□□□□ -1.33
CSTF3-208ENST00000528865 EREGO14944 169 aa6.76□□□□□ -1.33
CSTF3-208ENST00000528865 HLA-DQA1P01909 254 aa6.76□□□□□ -1.33
CSTF3-208ENST00000528865 CRYGBP07316 175 aa6.76□□□□□ -1.33
CSTF3-208ENST00000528865 CCL3L1P16619 93 aa6.76□□□□□ -1.33
CSTF3-208ENST00000528865 BRS3P32247 399 aa6.76□□□□□ -1.33
CSTF3-208ENST00000528865 MC5RP33032 325 aa6.76□□□□□ -1.33
CSTF3-208ENST00000528865 LGALS7P47929 136 aa6.76□□□□□ -1.33
CSTF3-208ENST00000528865 WT1-ASQ06250 92 aa6.76□□□□□ -1.33
CSTF3-208ENST00000528865 ASCL5Q7RTU5 278 aa6.76□□□□□ -1.33
CSTF3-208ENST00000528865 ZNF329Q86UD4 541 aa6.76□□□□□ -1.33
CSTF3-208ENST00000528865 BAGE3Q86Y29 109 aa6.76□□□□□ -1.33
CSTF3-208ENST00000528865 BAGE2Q86Y30 109 aa6.76□□□□□ -1.33
CSTF3-208ENST00000528865 DOLPP1Q86YN1 238 aa6.76□□□□□ -1.33
CSTF3-208ENST00000528865 OR5AU1Q8NGC0 362 aa6.76□□□□□ -1.33
CSTF3-208ENST00000528865 GRAMD2BQ96HH9 432 aa6.76□□□□□ -1.33
CSTF3-208ENST00000528865 HSPB9Q9BQS6 159 aa6.76□□□□□ -1.33
CSTF3-208ENST00000528865 MIEN1Q9BRT3 115 aa6.76□□□□□ -1.33
CSTF3-208ENST00000528865 CHRDL1Q9BU40 450 aa6.76□□□□□ -1.33
CSTF3-208ENST00000528865 PAXXQ9BUH6 204 aa6.76□□□□□ -1.33
CSTF3-208ENST00000528865 RNASE7Q9H1E1 156 aaKnown RBP6.76□□□□□ -1.33
CSTF3-208ENST00000528865 FNDC4Q9H6D8 234 aaPredicted RBP6.76□□□□□ -1.33
CSTF3-208ENST00000528865 GNB4Q9HAV0 340 aa6.76□□□□□ -1.33
CSTF3-208ENST00000528865 WASHC3Q9Y3C0 194 aa6.76□□□□□ -1.33
CSTF3-208ENST00000528865 URB1O60287 2271 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms