RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 ZNF562Q6V9R5 426 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 ATP5L2Q7Z4Y8 100 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 LRTM2Q8N967 370 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 FER1L6-AS1Q8NA97 138 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 OR4C13Q8NGP0 309 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 OR9G1Q8NH87 305 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 TMEM171Q8WVE6 324 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 TMEM101Q96IK0 257 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 TMUB1Q9BVT8 246 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 C9orf172C9J069 976 aa6.07□□□□□ -1.44
CTNND1-218ENST00000528232 H3BRM9 83 aa6.07□□□□□ -1.44
CTNND1-218ENST00000528232 TM4SF5O14894 197 aa6.07□□□□□ -1.44
CTNND1-218ENST00000528232 PSG1P11464 419 aa6.07□□□□□ -1.44
CTNND1-218ENST00000528232 C9orf153Q5TBE3 101 aa6.07□□□□□ -1.44
CTNND1-218ENST00000528232 C18orf12Q96KH6 178 aa6.07□□□□□ -1.44
CTNND1-218ENST00000528232 SNHG12Q9BXW3 62 aa6.07□□□□□ -1.44
CTNND1-218ENST00000528232 MRPL27Q9P0M9 148 aaKnown RBP6.07□□□□□ -1.44
CTNND1-218ENST00000528232 TCF19Q9Y242 345 aa6.07□□□□□ -1.44
CTNND1-218ENST00000528232 TCF20Q9UGU0 1960 aaKnown RBP6.07□□□□□ -1.44
CTNND1-218ENST00000528232 A0A087WV48 116 aa6.07□□□□□ -1.44
CTNND1-218ENST00000528232 IGHV2OR16-5A0A0B4J2B6 119 aa6.07□□□□□ -1.44
CTNND1-218ENST00000528232 SSTR5P35346 364 aa6.07□□□□□ -1.44
CTNND1-218ENST00000528232 RSPO4Q2I0M5 234 aaPredicted RBP6.07□□□□□ -1.44
CTNND1-218ENST00000528232 GCSAMLQ5JQS6 135 aa6.07□□□□□ -1.44
CTNND1-218ENST00000528232 BIVMQ86UB2 503 aa6.07□□□□□ -1.44
CTNND1-218ENST00000528232 PGLYRP4Q96LB8 373 aa6.07□□□□□ -1.44
CTNND1-218ENST00000528232 TNFRSF19Q9NS68 423 aa6.07□□□□□ -1.44
CTNND1-218ENST00000528232 SCN8AQ9UQD0 1980 aa6.07□□□□□ -1.44
CTNND1-218ENST00000528232 ANAPC1Q9H1A4 1944 aa6.07□□□□□ -1.44
CTNND1-218ENST00000528232 GAGE12JA6NER3 117 aa6.07□□□□□ -1.44
CTNND1-218ENST00000528232 B9A039 149 aa6.07□□□□□ -1.44
CTNND1-218ENST00000528232 C12orf77C9JDV5 145 aa6.07□□□□□ -1.44
CTNND1-218ENST00000528232 GAGE7O76087 117 aa6.07□□□□□ -1.44
CTNND1-218ENST00000528232 PRSS2P07478 247 aa6.07□□□□□ -1.44
CTNND1-218ENST00000528232 GAGE12FP0CL80 117 aa6.07□□□□□ -1.44
CTNND1-218ENST00000528232 GAGE12GP0CL81 117 aa6.07□□□□□ -1.44
CTNND1-218ENST00000528232 GAGE12IP0CL82 117 aa6.07□□□□□ -1.44
CTNND1-218ENST00000528232 GAGE4Q13068 117 aa6.07□□□□□ -1.44
CTNND1-218ENST00000528232 SRSF6Q13247 344 aaKnown RBP6.07□□□□□ -1.44
CTNND1-218ENST00000528232 C2orf83Q53S99 150 aa6.07□□□□□ -1.44
CTNND1-218ENST00000528232 ACTL10Q5JWF8 245 aa6.07□□□□□ -1.44
CTNND1-218ENST00000528232 EBLN2Q6P2I7 272 aa6.07□□□□□ -1.44
CTNND1-218ENST00000528232 NEU1Q99519 415 aa6.07□□□□□ -1.44
CTNND1-218ENST00000528232 TMEM56-RWDD3S4R434 201 aa6.07□□□□□ -1.44
CTNND1-218ENST00000528232 ICE1Q9Y2F5 2266 aa6.07□□□□□ -1.44
CTNND1-218ENST00000528232 IGKV1-9A0A0C4DH69 117 aa6.07□□□□□ -1.44
CTNND1-218ENST00000528232 WNT9BO14905 357 aa6.07□□□□□ -1.44
CTNND1-218ENST00000528232 RPL23P62829 140 aaKnown RBP6.07□□□□□ -1.44
CTNND1-218ENST00000528232 CSTL1Q9H114 145 aa6.07□□□□□ -1.44
CTNND1-218ENST00000528232 OSTCQ9NRP0 149 aa6.07□□□□□ -1.44
CTNND1-218ENST00000528232 TRAV5A0A0B4J249 113 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 FAM106CPP0CH98 169 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 APELAP0DMC3 54 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 CRYGSP22914 178 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 MEIG1Q5JSS6 88 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 UNQ5815/PRO19632Q6UWF5 114 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 TMEM144Q7Z5S9 345 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 WFDC3Q8IUB2 231 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 PAQR4Q8N4S7 273 aaPredicted RBP6.06□□□□□ -1.44
CTNND1-218ENST00000528232 FAM57AQ8TBR7 257 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 AGMATQ9BSE5 352 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 DEPPQ9NTK1 212 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 KLF12Q9Y4X4 402 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 FCN3O75636 299 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 NDUFC2O95298 119 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 ARL14EPLP0DKL9 152 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 ID4P47928 161 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 PSG9Q00887 426 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 ECSCRQ19T08 205 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 ABHD12Q8N2K0 398 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 WBP1Q96G27 269 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 YAE1D1Q9NRH1 226 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 IGKV3D-15A0A087WSY6 115 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 IGHV3-21A0A0B4J1V1 117 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 PPIAL4CA0A0B4J2A2 164 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 MSGN1A6NI15 193 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 EFNA2O43921 213 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 PPIAL4GP0DN37 164 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 CEACAM1P13688 526 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 ICAM4Q14773 271 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 TEX38Q6PEX7 206 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 TRBV6-7A0A0A0MS04 114 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 PRSS47A8MTI9 375 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 MLNRO43193 412 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 DLX6P56179 175 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 SRSF7Q16629 238 aaKnown RBP eCLIP6.06□□□□□ -1.441e-6■■□□□ 13.9
CTNND1-218ENST00000528232 A0A0A6YYD4 124 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 C8orf88P0DMB2 117 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 LY6G6FQ5SQ64 297 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 NABP1Q96AH0 204 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 DPH3Q96FX2 82 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 CLEC7AQ9BXN2 247 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 TICRRQ7Z2Z1 1910 aa6.06□□□□□ -1.44
CTNND1-218ENST00000528232 ARID1AO14497 2285 aa6.05□□□□□ -1.44
CTNND1-218ENST00000528232 IGHV2-5P01817 119 aa6.05□□□□□ -1.44
CTNND1-218ENST00000528232 IFITM1P13164 125 aa6.05□□□□□ -1.44
CTNND1-218ENST00000528232 ANOS1P23352 680 aa6.05□□□□□ -1.44
CTNND1-218ENST00000528232 ADMP35318 185 aa6.05□□□□□ -1.44
CTNND1-218ENST00000528232 PSG7Q13046 419 aa6.05□□□□□ -1.44
CTNND1-218ENST00000528232 ATXN8Q156A1 80 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms