RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 FAM90A2PQ658T7 463 aa19.05■□□□□ 0.64
TRIM3-206ENST00000528227 TMEM217Q8N7C4 229 aa19.05■□□□□ 0.64
TRIM3-206ENST00000528227 PINX1Q96BK5 328 aaKnown RBP19.05■□□□□ 0.64
TRIM3-206ENST00000528227 GNG7O60262 68 aa19.04■□□□□ 0.64
TRIM3-206ENST00000528227 ERHP84090 104 aaKnown RBP19.04■□□□□ 0.64
TRIM3-206ENST00000528227 FUNDC2Q9BWH2 189 aa19.04■□□□□ 0.64
TRIM3-206ENST00000528227 IGKV3-7A0A075B6H7 116 aa19.03■□□□□ 0.64
TRIM3-206ENST00000528227 IGHV3OR16-13A0A075B7E8 117 aa19.03■□□□□ 0.64
TRIM3-206ENST00000528227 IGHV3-74A0A0B4J1X5 117 aa19.03■□□□□ 0.64
TRIM3-206ENST00000528227 M0QYG6 137 aa19.03■□□□□ 0.64
TRIM3-206ENST00000528227 HPGDSO60760 199 aa19.03■□□□□ 0.64
TRIM3-206ENST00000528227 VBP1P61758 197 aa19.03■□□□□ 0.64
TRIM3-206ENST00000528227 IZUMO4Q1ZYL8 232 aa19.03■□□□□ 0.64
TRIM3-206ENST00000528227 CSTL1Q9H114 145 aa19.03■□□□□ 0.64
TRIM3-206ENST00000528227 KLK5Q9Y337 293 aaPredicted RBP19.03■□□□□ 0.64
TRIM3-206ENST00000528227 RND3P61587 244 aa19.02■□□□□ 0.64
TRIM3-206ENST00000528227 SPINK9Q5DT21 86 aa19.02■□□□□ 0.64
TRIM3-206ENST00000528227 IGKV1-5P01602 117 aa19.01■□□□□ 0.63
TRIM3-206ENST00000528227 TOMM20LQ6UXN7 152 aa19.01■□□□□ 0.63
TRIM3-206ENST00000528227 GBGT1Q8N5D6 347 aa19.01■□□□□ 0.63
TRIM3-206ENST00000528227 ZNF486Q96H40 463 aaPredicted RBP19.01■□□□□ 0.63
TRIM3-206ENST00000528227 GINS3Q9BRX5 216 aa19.01■□□□□ 0.63
TRIM3-206ENST00000528227 MPTX1A8MV57 137 aa19■□□□□ 0.63
TRIM3-206ENST00000528227 P0C879 139 aa19■□□□□ 0.63
TRIM3-206ENST00000528227 TCF24Q7RTU0 167 aa19■□□□□ 0.63
TRIM3-206ENST00000528227 LHFPL1Q86WI0 220 aa19■□□□□ 0.63
TRIM3-206ENST00000528227 GATAD1Q8WUU5 269 aa19■□□□□ 0.63
TRIM3-206ENST00000528227 ST8SIA2Q92186 375 aa19■□□□□ 0.63
TRIM3-206ENST00000528227 VSIRQ9H7M9 311 aa19■□□□□ 0.63
TRIM3-206ENST00000528227 INS-IGF2F8WCM5 200 aa18.99■□□□□ 0.63
TRIM3-206ENST00000528227 CD5P06127 495 aa18.99■□□□□ 0.63
TRIM3-206ENST00000528227 PGAM2P15259 253 aa18.99■□□□□ 0.63
TRIM3-206ENST00000528227 PI3P19957 117 aa18.99■□□□□ 0.63
TRIM3-206ENST00000528227 NPBWR1P48145 328 aa18.99■□□□□ 0.63
TRIM3-206ENST00000528227 DUSP18Q8NEJ0 188 aa18.99■□□□□ 0.63
TRIM3-206ENST00000528227 TP53RKQ96S44 253 aa18.99■□□□□ 0.63
TRIM3-206ENST00000528227 ZFAND3Q9H8U3 227 aa18.99■□□□□ 0.63
TRIM3-206ENST00000528227 A0A0B4J293 547 aa18.98■□□□□ 0.63
TRIM3-206ENST00000528227 APOHP02749 345 aaPredicted RBP18.98■□□□□ 0.63
TRIM3-206ENST00000528227 RORCP51449 518 aa18.98■□□□□ 0.63
TRIM3-206ENST00000528227 PIGPP57054 158 aa18.98■□□□□ 0.63
TRIM3-206ENST00000528227 PAFAH1B2P68402 229 aa18.98■□□□□ 0.63
TRIM3-206ENST00000528227 RNASE12Q5GAN4 147 aaKnown RBP18.98■□□□□ 0.63
TRIM3-206ENST00000528227 PVRIGQ6DKI7 326 aa18.98■□□□□ 0.63
TRIM3-206ENST00000528227 LILRB2Q8N423 598 aa18.98■□□□□ 0.63
TRIM3-206ENST00000528227 SLC35G3Q8N808 338 aa18.98■□□□□ 0.63
TRIM3-206ENST00000528227 PHLDA1Q8WV24 401 aaPredicted RBP18.98■□□□□ 0.63
TRIM3-206ENST00000528227 RARRES2Q99969 163 aa18.98■□□□□ 0.63
TRIM3-206ENST00000528227 KLK11Q9UBX7 282 aa18.98■□□□□ 0.63
TRIM3-206ENST00000528227 ST8SIA3O43173 380 aa18.97■□□□□ 0.63
TRIM3-206ENST00000528227 SNCAP37840 140 aa18.97■□□□□ 0.63
TRIM3-206ENST00000528227 AKR1C2P52895 323 aa18.97■□□□□ 0.63
TRIM3-206ENST00000528227 RNASE10Q5GAN6 216 aaKnown RBP18.97■□□□□ 0.63
TRIM3-206ENST00000528227 ZNF600Q6ZNG1 722 aa18.97■□□□□ 0.63
TRIM3-206ENST00000528227 ARRDC1Q8N5I2 433 aa18.97■□□□□ 0.63
TRIM3-206ENST00000528227 PUS1Q9Y606 427 aaKnown RBP eCLIP18.97■□□□□ 0.63
TRIM3-206ENST00000528227 FAM25AB3EWG3 89 aa18.96■□□□□ 0.63
TRIM3-206ENST00000528227 FAM25CB3EWG5 89 aa18.96■□□□□ 0.63
TRIM3-206ENST00000528227 FAM25GB3EWG6 89 aa18.96■□□□□ 0.63
TRIM3-206ENST00000528227 TMEM50AO95807 157 aa18.96■□□□□ 0.63
TRIM3-206ENST00000528227 CD3DP04234 171 aa18.96■□□□□ 0.63
TRIM3-206ENST00000528227 MS4A6AQ9H2W1 248 aa18.96■□□□□ 0.63
TRIM3-206ENST00000528227 C3orf85A0A1B0GTC6 90 aa18.95■□□□□ 0.62
TRIM3-206ENST00000528227 DFFBO76075 338 aa18.95■□□□□ 0.62
TRIM3-206ENST00000528227 IFNA17P01571 189 aa18.95■□□□□ 0.62
TRIM3-206ENST00000528227 MZT2AQ6P582 158 aa18.95■□□□□ 0.62
TRIM3-206ENST00000528227 OR52I2Q8NH67 350 aa18.95■□□□□ 0.62
TRIM3-206ENST00000528227 IGHV3-66A0A0C4DH42 116 aa18.94■□□□□ 0.62
TRIM3-206ENST00000528227 A0A1B0GU03 582 aa18.94■□□□□ 0.62
TRIM3-206ENST00000528227 CORTO00230 105 aa18.94■□□□□ 0.62
TRIM3-206ENST00000528227 ATG12O94817 140 aa18.94■□□□□ 0.62
TRIM3-206ENST00000528227 RNASE2P10153 161 aaKnown RBP18.94■□□□□ 0.62
TRIM3-206ENST00000528227 OR11H2Q8NH07 326 aa18.94■□□□□ 0.62
TRIM3-206ENST00000528227 PDCD10Q9BUL8 212 aa18.94■□□□□ 0.62
TRIM3-206ENST00000528227 C11orf68Q9H3H3 251 aaKnown RBP18.94■□□□□ 0.62
TRIM3-206ENST00000528227 MTFP1Q9UDX5 166 aa18.94■□□□□ 0.62
TRIM3-206ENST00000528227 TRAV2A0A0B4J234 112 aa18.93■□□□□ 0.62
TRIM3-206ENST00000528227 DNASE2O00115 360 aaPredicted RBP18.93■□□□□ 0.62
TRIM3-206ENST00000528227 TBPP20226 339 aa18.93■□□□□ 0.62
TRIM3-206ENST00000528227 ETV6P41212 452 aa18.93■□□□□ 0.62
TRIM3-206ENST00000528227 PPP5CP53041 499 aa18.93■□□□□ 0.62
TRIM3-206ENST00000528227 SUB1P53999 127 aaKnown RBP eCLIP18.93■□□□□ 0.62
TRIM3-206ENST00000528227 KMT2AQ03164 3969 aa18.92■□□□□ 0.62
TRIM3-206ENST00000528227 CA1P00915 261 aaPredicted RBP18.92■□□□□ 0.62
TRIM3-206ENST00000528227 HOXA1P49639 335 aaPredicted RBP18.92■□□□□ 0.62
TRIM3-206ENST00000528227 DEFB131AP59861 70 aa18.92■□□□□ 0.62
TRIM3-206ENST00000528227 TRIM16LQ309B1 348 aa18.92■□□□□ 0.62
TRIM3-206ENST00000528227 SP6Q3SY56 376 aa18.92■□□□□ 0.62
TRIM3-206ENST00000528227 LEMD1Q68G75 181 aa18.92■□□□□ 0.62
TRIM3-206ENST00000528227 FAM24BQ8N5W8 94 aa18.92■□□□□ 0.62
TRIM3-206ENST00000528227 OR4D10Q8NGI6 311 aa18.92■□□□□ 0.62
TRIM3-206ENST00000528227 AP3S1Q92572 193 aa18.92■□□□□ 0.62
TRIM3-206ENST00000528227 FNDC4Q9H6D8 234 aaPredicted RBP18.92■□□□□ 0.62
TRIM3-206ENST00000528227 MRPL36Q9P0J6 103 aaKnown RBP18.92■□□□□ 0.62
TRIM3-206ENST00000528227 COPZ2Q9P299 210 aa18.92■□□□□ 0.62
TRIM3-206ENST00000528227 EXTL2Q9UBQ6 330 aa18.92■□□□□ 0.62
TRIM3-206ENST00000528227 A0A0G2JRQ6 117 aa18.91■□□□□ 0.62
TRIM3-206ENST00000528227 NANOS2P60321 138 aaKnown RBP18.91■□□□□ 0.62
TRIM3-206ENST00000528227 RPL11P62913 178 aaKnown RBP18.91■□□□□ 0.62
TRIM3-206ENST00000528227 RPP25LQ8N5L8 163 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms