RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 AARDQ4LEZ3 155 aa24.85■■□□□ 1.57
SSSCA1-205ENST00000527920 Q56UQ5 140 aa24.85■■□□□ 1.57
SSSCA1-205ENST00000527920 BTNL8Q6UX41 500 aa24.85■■□□□ 1.57
SSSCA1-205ENST00000527920 SLC35G3Q8N808 338 aa24.85■■□□□ 1.57
SSSCA1-205ENST00000527920 MISP3Q96FF7 219 aa24.85■■□□□ 1.57
SSSCA1-205ENST00000527920 SCP2D1Q9UJQ7 156 aa24.85■■□□□ 1.57
SSSCA1-205ENST00000527920 CRYM-AS1A6NIL9 109 aa24.84■■□□□ 1.57
SSSCA1-205ENST00000527920 CD7P09564 240 aa24.84■■□□□ 1.57
SSSCA1-205ENST00000527920 UBAC2Q8NBM4 344 aa24.84■■□□□ 1.57
SSSCA1-205ENST00000527920 PDCD10Q9BUL8 212 aa24.84■■□□□ 1.57
SSSCA1-205ENST00000527920 IFNA17P01571 189 aa24.83■■□□□ 1.57
SSSCA1-205ENST00000527920 CTSGP08311 255 aa24.83■■□□□ 1.57
SSSCA1-205ENST00000527920 MFAP4P55083 255 aa24.83■■□□□ 1.57
SSSCA1-205ENST00000527920 HAGHQ16775 308 aa24.83■■□□□ 1.57
SSSCA1-205ENST00000527920 PVRIGQ6DKI7 326 aa24.83■■□□□ 1.57
SSSCA1-205ENST00000527920 LINC00322Q6ZN03 302 aaPredicted RBP24.83■■□□□ 1.57
SSSCA1-205ENST00000527920 SLC16A13Q7RTY0 426 aa24.83■■□□□ 1.57
SSSCA1-205ENST00000527920 RBPMSQ93062 196 aaKnown RBP24.83■■□□□ 1.57
SSSCA1-205ENST00000527920 SCGB3A2Q96PL1 93 aa24.83■■□□□ 1.57
SSSCA1-205ENST00000527920 A0A0G2JRQ6 117 aa24.82■■□□□ 1.56
SSSCA1-205ENST00000527920 K7EMT4 169 aa24.82■■□□□ 1.56
SSSCA1-205ENST00000527920 MT-CO2P00403 227 aa24.82■■□□□ 1.56
SSSCA1-205ENST00000527920 RNASE11Q8TAA1 199 aaKnown RBP24.82■■□□□ 1.56
SSSCA1-205ENST00000527920 SPATA25Q9BR10 227 aa24.82■■□□□ 1.56
SSSCA1-205ENST00000527920 RBM38Q9H0Z9 239 aaKnown RBP24.82■■□□□ 1.56
SSSCA1-205ENST00000527920 NUPL2O15504 423 aaKnown RBP24.81■■□□□ 1.56
SSSCA1-205ENST00000527920 SNCAP37840 140 aa24.81■■□□□ 1.56
SSSCA1-205ENST00000527920 RELQ04864 619 aaPredicted RBP24.81■■□□□ 1.56
SSSCA1-205ENST00000527920 ANKRD55Q3KP44 614 aa24.81■■□□□ 1.56
SSSCA1-205ENST00000527920 C15orf62A8K5M9 175 aa24.8■■□□□ 1.56
SSSCA1-205ENST00000527920 ZNF701M0R085 212 aaPredicted RBP24.8■■□□□ 1.56
SSSCA1-205ENST00000527920 SPINK9Q5DT21 86 aa24.8■■□□□ 1.56
SSSCA1-205ENST00000527920 OR52E5Q8NH55 327 aa24.8■■□□□ 1.56
SSSCA1-205ENST00000527920 LHFPL5Q8TAF8 219 aa24.8■■□□□ 1.56
SSSCA1-205ENST00000527920 GALNT14Q96FL9 552 aa24.8■■□□□ 1.56
SSSCA1-205ENST00000527920 CCDC160A6NGH7 325 aa24.79■■□□□ 1.56
SSSCA1-205ENST00000527920 OR11H12B2RN74 326 aa24.79■■□□□ 1.56
SSSCA1-205ENST00000527920 SUB1P53999 127 aaKnown RBP eCLIP24.79■■□□□ 1.56
SSSCA1-205ENST00000527920 TMEM56-RWDD3S4R434 201 aa24.79■■□□□ 1.56
SSSCA1-205ENST00000527920 C3orf84H3BNL1 204 aa24.78■■□□□ 1.56
SSSCA1-205ENST00000527920 CORTO00230 105 aa24.78■■□□□ 1.56
SSSCA1-205ENST00000527920 Q6ZRM9 215 aa24.78■■□□□ 1.56
SSSCA1-205ENST00000527920 RBPMS2Q6ZRY4 209 aaKnown RBP24.78■■□□□ 1.56
SSSCA1-205ENST00000527920 SELENOHQ8IZQ5 122 aaKnown RBP24.78■■□□□ 1.56
SSSCA1-205ENST00000527920 DEFB125Q8N687 156 aa24.78■■□□□ 1.56
SSSCA1-205ENST00000527920 IL22RA2Q969J5 263 aa24.78■■□□□ 1.56
SSSCA1-205ENST00000527920 TRIM63Q969Q1 353 aa24.78■■□□□ 1.56
SSSCA1-205ENST00000527920 ZNF414Q96IQ9 312 aa24.78■■□□□ 1.56
SSSCA1-205ENST00000527920 CTNNBIP1Q9NSA3 81 aaPredicted RBP24.78■■□□□ 1.56
SSSCA1-205ENST00000527920 SCAF4O95104 1147 aaKnown RBP24.77■■□□□ 1.56
SSSCA1-205ENST00000527920 ETV6P41212 452 aa24.77■■□□□ 1.56
SSSCA1-205ENST00000527920 HOXA1P49639 335 aaPredicted RBP24.77■■□□□ 1.56
SSSCA1-205ENST00000527920 SPCS3P61009 180 aa24.77■■□□□ 1.56
SSSCA1-205ENST00000527920 OR52B4Q8NGK2 314 aa24.77■■□□□ 1.56
SSSCA1-205ENST00000527920 PINX1Q96BK5 328 aaKnown RBP24.77■■□□□ 1.56
SSSCA1-205ENST00000527920 CITED4Q96RK1 184 aa24.77■■□□□ 1.56
SSSCA1-205ENST00000527920 SPAG8Q99932 426 aaPredicted RBP24.77■■□□□ 1.56
SSSCA1-205ENST00000527920 ENY2Q9NPA8 101 aa24.77■■□□□ 1.56
SSSCA1-205ENST00000527920 MCUBQ9NWR8 336 aa24.77■■□□□ 1.56
SSSCA1-205ENST00000527920 V9GYH0 126 aa24.77■■□□□ 1.56
SSSCA1-205ENST00000527920 KMT2CQ8NEZ4 4911 aaKnown RBP24.76■■□□□ 1.55
SSSCA1-205ENST00000527920 RNASE2P10153 161 aaKnown RBP24.76■■□□□ 1.55
SSSCA1-205ENST00000527920 S100A5P33763 92 aa24.76■■□□□ 1.55
SSSCA1-205ENST00000527920 FAUP35544 74 aaKnown RBP24.76■■□□□ 1.55
SSSCA1-205ENST00000527920 AP3S2P59780 193 aa24.76■■□□□ 1.55
SSSCA1-205ENST00000527920 BSXQ3C1V8 233 aa24.76■■□□□ 1.55
SSSCA1-205ENST00000527920 DEDD2Q8WXF8 326 aa24.76■■□□□ 1.55
SSSCA1-205ENST00000527920 OR10C1Q96KK4 312 aa24.76■■□□□ 1.55
SSSCA1-205ENST00000527920 C20orf24Q9BUV8 137 aa24.76■■□□□ 1.55
SSSCA1-205ENST00000527920 SRD5A3Q9H8P0 318 aa24.76■■□□□ 1.55
SSSCA1-205ENST00000527920 KCNIP3Q9Y2W7 256 aa24.76■■□□□ 1.55
SSSCA1-205ENST00000527920 TSPAN4O14817 238 aa24.75■■□□□ 1.55
SSSCA1-205ENST00000527920 NPBWR1P48145 328 aa24.75■■□□□ 1.55
SSSCA1-205ENST00000527920 KLF9Q13886 244 aaPredicted RBP24.75■■□□□ 1.55
SSSCA1-205ENST00000527920 TMEM268Q5VZI3 342 aa24.75■■□□□ 1.55
SSSCA1-205ENST00000527920 TMEM230Q96A57 120 aa24.75■■□□□ 1.55
SSSCA1-205ENST00000527920 CACFD1Q9UGQ2 172 aa24.75■■□□□ 1.55
SSSCA1-205ENST00000527920 SELENOKQ9Y6D0 94 aa24.75■■□□□ 1.55
SSSCA1-205ENST00000527920 GNG7O60262 68 aa24.74■■□□□ 1.55
SSSCA1-205ENST00000527920 LAMTOR1Q6IAA8 161 aa24.74■■□□□ 1.55
SSSCA1-205ENST00000527920 DUSP18Q8NEJ0 188 aa24.74■■□□□ 1.55
SSSCA1-205ENST00000527920 MUC7Q8TAX7 377 aa24.74■■□□□ 1.55
SSSCA1-205ENST00000527920 WFDC10AQ9H1F0 79 aa24.74■■□□□ 1.55
SSSCA1-205ENST00000527920 TMEM187Q14656 261 aa24.73■■□□□ 1.55
SSSCA1-205ENST00000527920 PYDC2Q56P42 97 aa24.73■■□□□ 1.55
SSSCA1-205ENST00000527920 CACNG5Q9UF02 275 aa24.73■■□□□ 1.55
SSSCA1-205ENST00000527920 RBMY1BA6NDE4 496 aaKnown RBP24.72■■□□□ 1.55
SSSCA1-205ENST00000527920 RBMY1EA6NEQ0 496 aaKnown RBP24.72■■□□□ 1.55
SSSCA1-205ENST00000527920 IGHV3-48P01763 117 aa24.72■■□□□ 1.55
SSSCA1-205ENST00000527920 RBMY1DP0C7P1 496 aaKnown RBP24.72■■□□□ 1.55
SSSCA1-205ENST00000527920 ZNF79Q15937 498 aa24.72■■□□□ 1.55
SSSCA1-205ENST00000527920 CCDC190Q86UF4 302 aa24.72■■□□□ 1.55
SSSCA1-205ENST00000527920 GPR146Q96CH1 333 aa24.72■■□□□ 1.55
SSSCA1-205ENST00000527920 SMPXQ9UHP9 88 aa24.71■■□□□ 1.55
SSSCA1-205ENST00000527920 TOMM5Q8N4H5 51 aa24.7■■□□□ 1.54
SSSCA1-205ENST00000527920 HIPK2Q9H2X6 1198 aa24.7■■□□□ 1.54
SSSCA1-205ENST00000527920 IGHV3OR16-8A0A075B7F1 116 aa24.69■■□□□ 1.54
SSSCA1-205ENST00000527920 YIF1AO95070 293 aa24.69■■□□□ 1.54
SSSCA1-205ENST00000527920 HTR2BP41595 481 aa24.69■■□□□ 1.54
SSSCA1-205ENST00000527920 SUPT4H1P63272 117 aaKnown RBP24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms