RNA–Protein interactions for RNA: ENST00000527339.1

LTBP3-208, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-208ENST00000527339 ATP6V0BQ99437 205 aa13.26□□□□□ -0.29
LTBP3-208ENST00000527339 K7EIM0 57 aa13.25□□□□□ -0.29
LTBP3-208ENST00000527339 CLEC3BP05452 202 aa13.25□□□□□ -0.29
LTBP3-208ENST00000527339 SNCAP37840 140 aa13.25□□□□□ -0.29
LTBP3-208ENST00000527339 ZNF846Q147U1 533 aa13.25□□□□□ -0.29
LTBP3-208ENST00000527339 SMCO1Q147U7 214 aa13.25□□□□□ -0.29
LTBP3-208ENST00000527339 ANKRD55Q3KP44 614 aa13.25□□□□□ -0.29
LTBP3-208ENST00000527339 FLVCR2Q9UPI3 526 aa13.25□□□□□ -0.29
LTBP3-208ENST00000527339 SORL1Q92673 2214 aa13.25□□□□□ -0.29
LTBP3-208ENST00000527339 GPR183P32249 361 aa13.24□□□□□ -0.29
LTBP3-208ENST00000527339 SUB1P53999 127 aaKnown RBP eCLIP13.24□□□□□ -0.29
LTBP3-208ENST00000527339 SCARB1Q8WTV0 552 aa13.24□□□□□ -0.29
LTBP3-208ENST00000527339 MISP3Q96FF7 219 aa13.24□□□□□ -0.29
LTBP3-208ENST00000527339 C21orf62Q9NYP8 219 aa13.24□□□□□ -0.29
LTBP3-208ENST00000527339 PEMTQ9UBM1 199 aa13.24□□□□□ -0.29
LTBP3-208ENST00000527339 DYNC2H1Q8NCM8 4307 aaKnown RBP13.23□□□□□ -0.29
LTBP3-208ENST00000527339 A0A1B0GU03 582 aa13.23□□□□□ -0.29
LTBP3-208ENST00000527339 C9orf170A2RU37 121 aa13.23□□□□□ -0.29
LTBP3-208ENST00000527339 OR2C1O95371 312 aa13.23□□□□□ -0.29
LTBP3-208ENST00000527339 HLA-AP01891 365 aaKnown RBP13.23□□□□□ -0.29
LTBP3-208ENST00000527339 OR4E1P0C645 316 aa13.23□□□□□ -0.29
LTBP3-208ENST00000527339 GPHB5Q86YW7 130 aa13.23□□□□□ -0.29
LTBP3-208ENST00000527339 BSCL2Q96G97 398 aaPredicted RBP13.23□□□□□ -0.29
LTBP3-208ENST00000527339 TMED3Q9Y3Q3 217 aa13.23□□□□□ -0.29
LTBP3-208ENST00000527339 STAB2Q8WWQ8 2551 aa13.23□□□□□ -0.29
LTBP3-208ENST00000527339 IGHV3-21A0A0B4J1V1 117 aa13.22□□□□□ -0.29
LTBP3-208ENST00000527339 CEBPZOSA8MTT3 80 aa13.22□□□□□ -0.29
LTBP3-208ENST00000527339 I3L2K1 104 aa13.22□□□□□ -0.29
LTBP3-208ENST00000527339 LGALS9O00182 355 aa13.22□□□□□ -0.29
LTBP3-208ENST00000527339 CORTO00230 105 aa13.22□□□□□ -0.29
LTBP3-208ENST00000527339 TGOLN2O43493 480 aa13.22□□□□□ -0.29
LTBP3-208ENST00000527339 RNASE2P10153 161 aaKnown RBP13.22□□□□□ -0.29
LTBP3-208ENST00000527339 SLC25A6P12236 298 aa13.22□□□□□ -0.29
LTBP3-208ENST00000527339 DHRS2Q13268 280 aa13.22□□□□□ -0.29
LTBP3-208ENST00000527339 BSXQ3C1V8 233 aa13.22□□□□□ -0.29
LTBP3-208ENST00000527339 FAM106AQ4KMX7 169 aa13.22□□□□□ -0.29
LTBP3-208ENST00000527339 PVRIGQ6DKI7 326 aa13.22□□□□□ -0.29
LTBP3-208ENST00000527339 SPSB3Q6PJ21 355 aa13.22□□□□□ -0.29
LTBP3-208ENST00000527339 PLET1Q6UQ28 207 aa13.22□□□□□ -0.29
LTBP3-208ENST00000527339 IL34Q6ZMJ4 242 aa13.22□□□□□ -0.29
LTBP3-208ENST00000527339 LYG2Q86SG7 212 aa13.22□□□□□ -0.29
LTBP3-208ENST00000527339 C20orf85Q9H1P6 137 aa13.22□□□□□ -0.29
LTBP3-208ENST00000527339 HEYLQ9NQ87 328 aaPredicted RBP13.22□□□□□ -0.29
LTBP3-208ENST00000527339 SIGLEC8Q9NYZ4 499 aa13.22□□□□□ -0.29
LTBP3-208ENST00000527339 HSPB7Q9UBY9 170 aa13.22□□□□□ -0.29
LTBP3-208ENST00000527339 RYR2Q92736 4967 aa13.22□□□□□ -0.29
LTBP3-208ENST00000527339 OR2T8A6NH00 312 aa13.21□□□□□ -0.29
LTBP3-208ENST00000527339 UPK1BO75841 260 aa13.21□□□□□ -0.29
LTBP3-208ENST00000527339 MT-CO2P00403 227 aa13.21□□□□□ -0.29
LTBP3-208ENST00000527339 TCRBP04435 133 aa13.21□□□□□ -0.29
LTBP3-208ENST00000527339 CSN3P07498 182 aa13.21□□□□□ -0.29
LTBP3-208ENST00000527339 ANXA7P20073 488 aaKnown RBP13.21□□□□□ -0.29
LTBP3-208ENST00000527339 HTR2BP41595 481 aa13.21□□□□□ -0.29
LTBP3-208ENST00000527339 TNFRSF9Q07011 255 aa13.21□□□□□ -0.29
LTBP3-208ENST00000527339 C4orf46Q504U0 113 aa13.21□□□□□ -0.29
LTBP3-208ENST00000527339 DEFB121Q5J5C9 76 aa13.21□□□□□ -0.29
LTBP3-208ENST00000527339 OR1S1Q8NH92 325 aa13.21□□□□□ -0.29
LTBP3-208ENST00000527339 COQ8AQ8NI60 647 aa13.21□□□□□ -0.29
LTBP3-208ENST00000527339 PINX1Q96BK5 328 aaKnown RBP13.21□□□□□ -0.29
LTBP3-208ENST00000527339 GAR1Q9NY12 217 aaKnown RBP13.21□□□□□ -0.29
LTBP3-208ENST00000527339 TBC1D24Q9ULP9 559 aa13.21□□□□□ -0.29
LTBP3-208ENST00000527339 ZNF256Q9Y2P7 627 aaPredicted RBP13.21□□□□□ -0.29
LTBP3-208ENST00000527339 F8W735 103 aaPredicted RBP13.2□□□□□ -0.3
LTBP3-208ENST00000527339 NXPH3O95157 252 aa13.2□□□□□ -0.3
LTBP3-208ENST00000527339 IGLV1-51P01701 117 aa13.2□□□□□ -0.3
LTBP3-208ENST00000527339 FCGR2BP31994 310 aaPredicted RBP13.2□□□□□ -0.3
LTBP3-208ENST00000527339 MFAP4P55083 255 aa13.2□□□□□ -0.3
LTBP3-208ENST00000527339 ASAH1Q13510 395 aa13.2□□□□□ -0.3
LTBP3-208ENST00000527339 Q56UQ5 140 aa13.2□□□□□ -0.3
LTBP3-208ENST00000527339 MZT2BQ6NZ67 158 aa13.2□□□□□ -0.3
LTBP3-208ENST00000527339 UBAC2Q8NBM4 344 aa13.2□□□□□ -0.3
LTBP3-208ENST00000527339 TXN2Q99757 166 aa13.2□□□□□ -0.3
LTBP3-208ENST00000527339 HIPK2Q9H2X6 1198 aa13.2□□□□□ -0.3
LTBP3-208ENST00000527339 ZC4H2Q9NQZ6 224 aa13.2□□□□□ -0.3
LTBP3-208ENST00000527339 SACSQ9NZJ4 4579 aa13.19□□□□□ -0.3
LTBP3-208ENST00000527339 FAM240BA0A1B0GVZ2 78 aa13.19□□□□□ -0.3
LTBP3-208ENST00000527339 A8MWP6 167 aa13.19□□□□□ -0.3
LTBP3-208ENST00000527339 PITX3O75364 302 aa13.19□□□□□ -0.3
LTBP3-208ENST00000527339 HOXB5P09067 269 aa13.19□□□□□ -0.3
LTBP3-208ENST00000527339 C2orf83Q53S99 150 aa13.19□□□□□ -0.3
LTBP3-208ENST00000527339 ZNF436Q9C0F3 470 aaPredicted RBP13.19□□□□□ -0.3
LTBP3-208ENST00000527339 HUWE1Q7Z6Z7 4374 aaKnown RBP13.19□□□□□ -0.3
LTBP3-208ENST00000527339 FAM90A26D6RGX4 464 aa13.18□□□□□ -0.3
LTBP3-208ENST00000527339 GGNBP1Q5YKI7 109 aa13.18□□□□□ -0.3
LTBP3-208ENST00000527339 SLC24A4Q8NFF2 622 aa13.18□□□□□ -0.3
LTBP3-208ENST00000527339 DTD1Q8TEA8 209 aa13.18□□□□□ -0.3
LTBP3-208ENST00000527339 PRR25Q96S07 402 aa13.18□□□□□ -0.3
LTBP3-208ENST00000527339 CHRDL1Q9BU40 450 aa13.18□□□□□ -0.3
LTBP3-208ENST00000527339 RBKSQ9H477 322 aa13.18□□□□□ -0.3
LTBP3-208ENST00000527339 PALMDQ9NP74 551 aa13.18□□□□□ -0.3
LTBP3-208ENST00000527339 NUDT15Q9NV35 164 aa13.18□□□□□ -0.3
LTBP3-208ENST00000527339 EPPK1P58107 5090 aaKnown RBP13.18□□□□□ -0.3
LTBP3-208ENST00000527339 DNAH7Q8WXX0 4024 aa13.18□□□□□ -0.3
LTBP3-208ENST00000527339 TRAV6A0A075B6T7 132 aa13.17□□□□□ -0.3
LTBP3-208ENST00000527339 ZNF320A2RRD8 509 aa13.17□□□□□ -0.3
LTBP3-208ENST00000527339 C2orf70A6NJV1 201 aa13.17□□□□□ -0.3
LTBP3-208ENST00000527339 LY86O95711 162 aa13.17□□□□□ -0.3
LTBP3-208ENST00000527339 CTSGP08311 255 aa13.17□□□□□ -0.3
LTBP3-208ENST00000527339 SPNP16150 400 aa13.17□□□□□ -0.3
LTBP3-208ENST00000527339 NPBWR1P48145 328 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms