RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 ZFP30Q9Y2G7 519 aa3.28□□□□□ -1.88
CD44-213ENST00000525209 A0A0C4DFX4 3053 aa3.28□□□□□ -1.88
CD44-213ENST00000525209 SZT2Q5T011 3432 aa3.28□□□□□ -1.88
CD44-213ENST00000525209 CUL9Q8IWT3 2517 aa3.27□□□□□ -1.89
CD44-213ENST00000525209 TRAV38-1A0A0B4J264 116 aa3.27□□□□□ -1.89
CD44-213ENST00000525209 A0A0J9YXY3 114 aa3.27□□□□□ -1.89
CD44-213ENST00000525209 C9JQL5 133 aa3.27□□□□□ -1.89
CD44-213ENST00000525209 COX7A2LO14548 114 aa3.27□□□□□ -1.89
CD44-213ENST00000525209 BCL2L11O43521 198 aa3.27□□□□□ -1.89
CD44-213ENST00000525209 LTAP01374 205 aa3.27□□□□□ -1.89
CD44-213ENST00000525209 IFNA17P01571 189 aa3.27□□□□□ -1.89
CD44-213ENST00000525209 UCHL1P09936 223 aa3.27□□□□□ -1.89
CD44-213ENST00000525209 P0DMU3 169 aa3.27□□□□□ -1.89
CD44-213ENST00000525209 FAM231AP0DMU4 169 aa3.27□□□□□ -1.89
CD44-213ENST00000525209 FAM231CP0DMU5 169 aa3.27□□□□□ -1.89
CD44-213ENST00000525209 CA7P43166 264 aa3.27□□□□□ -1.89
CD44-213ENST00000525209 DAPP51397 102 aa3.27□□□□□ -1.89
CD44-213ENST00000525209 GNB1P62873 340 aa3.27□□□□□ -1.89
CD44-213ENST00000525209 FKBP1AP62942 108 aaKnown RBP3.27□□□□□ -1.89
CD44-213ENST00000525209 GLT8D1Q68CQ7 371 aa3.27□□□□□ -1.89
CD44-213ENST00000525209 LYPD2Q6UXB3 125 aa3.27□□□□□ -1.89
CD44-213ENST00000525209 LYG1Q8N1E2 194 aa3.27□□□□□ -1.89
CD44-213ENST00000525209 ZNF645Q8N7E2 425 aa3.27□□□□□ -1.89
CD44-213ENST00000525209 SGMS2Q8NHU3 365 aa3.27□□□□□ -1.89
CD44-213ENST00000525209 FNDC9Q8TBE3 224 aa3.27□□□□□ -1.89
CD44-213ENST00000525209 VSIG2Q96IQ7 327 aa3.27□□□□□ -1.89
CD44-213ENST00000525209 TM2D3Q9BRN9 247 aa3.27□□□□□ -1.89
CD44-213ENST00000525209 WDR61Q9GZS3 305 aaKnown RBP3.27□□□□□ -1.89
CD44-213ENST00000525209 TAF9BQ9HBM6 251 aa3.27□□□□□ -1.89
CD44-213ENST00000525209 ZNF492Q9P255 531 aa3.27□□□□□ -1.89
CD44-213ENST00000525209 DNAJC12Q9UKB3 198 aa3.27□□□□□ -1.89
CD44-213ENST00000525209 PCTPQ9UKL6 214 aa3.27□□□□□ -1.89
CD44-213ENST00000525209 ATAD5Q96QE3 1844 aa3.27□□□□□ -1.89
CD44-213ENST00000525209 COL4A1P02462 1669 aa3.27□□□□□ -1.89
CD44-213ENST00000525209 DOCK2Q92608 1830 aa3.26□□□□□ -1.89
CD44-213ENST00000525209 A0A087X002 238 aa3.26□□□□□ -1.89
CD44-213ENST00000525209 LOC102724200A0A096LPH7 203 aaPredicted RBP3.26□□□□□ -1.89
CD44-213ENST00000525209 DHRS12A0PJE2 317 aa3.26□□□□□ -1.89
CD44-213ENST00000525209 DPRXA6NFQ7 191 aa3.26□□□□□ -1.89
CD44-213ENST00000525209 J3QQQ9 107 aa3.26□□□□□ -1.89
CD44-213ENST00000525209 DPM2O94777 84 aa3.26□□□□□ -1.89
CD44-213ENST00000525209 CSRP1P21291 193 aaKnown RBP3.26□□□□□ -1.89
CD44-213ENST00000525209 FGF7P21781 194 aa3.26□□□□□ -1.89
CD44-213ENST00000525209 FKBP2P26885 142 aaKnown RBP3.26□□□□□ -1.89
CD44-213ENST00000525209 ZNF83P51522 516 aa3.26□□□□□ -1.89
CD44-213ENST00000525209 ZNF181Q2M3W8 571 aa3.26□□□□□ -1.89
CD44-213ENST00000525209 LYRM7Q5U5X0 104 aa3.26□□□□□ -1.89
CD44-213ENST00000525209 TEX261Q6UWH6 196 aa3.26□□□□□ -1.89
CD44-213ENST00000525209 KTN1-AS1Q86SY8 53 aa3.26□□□□□ -1.89
CD44-213ENST00000525209 PRR15Q8IV56 129 aa3.26□□□□□ -1.89
CD44-213ENST00000525209 C8orf59Q8N0T1 100 aaPredicted RBP3.26□□□□□ -1.89
CD44-213ENST00000525209 ACBD7Q8N6N7 88 aa3.26□□□□□ -1.89
CD44-213ENST00000525209 OR4C16Q8NGL9 310 aa3.26□□□□□ -1.89
CD44-213ENST00000525209 RPL36ALQ969Q0 106 aaKnown RBP3.26□□□□□ -1.89
CD44-213ENST00000525209 HIST1H2BAQ96A08 127 aa3.26□□□□□ -1.89
CD44-213ENST00000525209 SLAMF6Q96DU3 332 aa3.26□□□□□ -1.89
CD44-213ENST00000525209 C2orf50Q96LR7 162 aa3.26□□□□□ -1.89
CD44-213ENST00000525209 TRIB3Q96RU7 358 aa3.26□□□□□ -1.89
CD44-213ENST00000525209 GPX7Q96SL4 187 aaPredicted RBP3.26□□□□□ -1.89
CD44-213ENST00000525209 SPIN2AQ99865 258 aa3.26□□□□□ -1.89
CD44-213ENST00000525209 SPIN2BQ9BPZ2 258 aa3.26□□□□□ -1.89
CD44-213ENST00000525209 SLC25A21Q9BQT8 299 aaPredicted RBP3.26□□□□□ -1.89
CD44-213ENST00000525209 GGTLC1Q9BX51 225 aa3.26□□□□□ -1.89
CD44-213ENST00000525209 TAC3Q9UHF0 121 aa3.26□□□□□ -1.89
CD44-213ENST00000525209 ARAP2Q8WZ64 1704 aa3.26□□□□□ -1.89
CD44-213ENST00000525209 ZNFX1Q9P2E3 1918 aaKnown RBP3.26□□□□□ -1.89
CD44-213ENST00000525209 GBF1Q92538 1859 aa3.26□□□□□ -1.89
CD44-213ENST00000525209 FOCADQ5VW36 1801 aa3.26□□□□□ -1.89
CD44-213ENST00000525209 SSC5DA1L4H1 1573 aa3.25□□□□□ -1.89
CD44-213ENST00000525209 TRBV20OR9-2A0A075B6H5 130 aa3.25□□□□□ -1.89
CD44-213ENST00000525209 TRAV9-1A0A075B6T8 112 aa3.25□□□□□ -1.89
CD44-213ENST00000525209 IGHV1-45A0A0A0MS14 117 aa3.25□□□□□ -1.89
CD44-213ENST00000525209 LY6LH3BQJ8 138 aa3.25□□□□□ -1.89
CD44-213ENST00000525209 SOCS3O14543 225 aa3.25□□□□□ -1.89
CD44-213ENST00000525209 PGLYRP1O75594 196 aaPredicted RBP3.25□□□□□ -1.89
CD44-213ENST00000525209 IGLV2-23P01705 113 aa3.25□□□□□ -1.89
CD44-213ENST00000525209 NTF3P20783 257 aa3.25□□□□□ -1.89
CD44-213ENST00000525209 TAS2R20P59543 309 aa3.25□□□□□ -1.89
CD44-213ENST00000525209 HBA1P69905 142 aa3.25□□□□□ -1.89
CD44-213ENST00000525209 HOXC5Q00444 222 aa3.25□□□□□ -1.89
CD44-213ENST00000525209 EIF3IQ13347 325 aaKnown RBP3.25□□□□□ -1.89
CD44-213ENST00000525209 KLF9Q13886 244 aaPredicted RBP3.25□□□□□ -1.89
CD44-213ENST00000525209 TMEM241Q24JQ0 296 aa3.25□□□□□ -1.89
CD44-213ENST00000525209 SMIM29Q86T20 159 aa3.25□□□□□ -1.89
CD44-213ENST00000525209 CROCCP2Q86T23 111 aa3.25□□□□□ -1.89
CD44-213ENST00000525209 ZNF695Q8IW36 515 aa3.25□□□□□ -1.89
CD44-213ENST00000525209 TCTEX1D1Q8N7M0 179 aa3.25□□□□□ -1.89
CD44-213ENST00000525209 OR5H2Q8NGV7 314 aa3.25□□□□□ -1.89
CD44-213ENST00000525209 TERB2Q8NHR7 220 aa3.25□□□□□ -1.89
CD44-213ENST00000525209 TOMM6Q96B49 74 aa3.25□□□□□ -1.89
CD44-213ENST00000525209 BORCS8Q96FH0 119 aa3.25□□□□□ -1.89
CD44-213ENST00000525209 PSMG3Q9BT73 122 aaPredicted RBP3.25□□□□□ -1.89
CD44-213ENST00000525209 KRTAP9-8Q9BYQ0 159 aa3.25□□□□□ -1.89
CD44-213ENST00000525209 AICDAQ9GZX7 198 aa3.25□□□□□ -1.89
CD44-213ENST00000525209 C6orf106Q9H6K1 298 aaPredicted RBP3.25□□□□□ -1.89
CD44-213ENST00000525209 RNF122Q9H9V4 155 aa3.25□□□□□ -1.89
CD44-213ENST00000525209 SND1-IT1Q9HBX3 110 aa3.25□□□□□ -1.89
CD44-213ENST00000525209 BRCA2P51587 3418 aa3.25□□□□□ -1.89
CD44-213ENST00000525209 UNC80Q8N2C7 3258 aa3.25□□□□□ -1.89
CD44-213ENST00000525209 DOCK1Q14185 1865 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms