RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	SLC25A14	O95258	325 aa	Predicted RBP	3.02	□□□□□ -1.93
PCM1-223	ENST00000524356	CRYBA1	P05813	215 aa		3.02	□□□□□ -1.93
PCM1-223	ENST00000524356	PFN1	P07737	140 aa	Known RBP	3.02	□□□□□ -1.93
PCM1-223	ENST00000524356	OR10J4	P0C629	311 aa		3.02	□□□□□ -1.93
PCM1-223	ENST00000524356	OMG	P23515	440 aa		3.02	□□□□□ -1.93
PCM1-223	ENST00000524356	GADD45A	P24522	165 aa		3.02	□□□□□ -1.93
PCM1-223	ENST00000524356	MAP2K4	P45985	399 aa		3.02	□□□□□ -1.93
PCM1-223	ENST00000524356	ZNF133	P52736	654 aa	Predicted RBP	3.02	□□□□□ -1.93
PCM1-223	ENST00000524356	CDC42	P60953	191 aa		3.02	□□□□□ -1.93
PCM1-223	ENST00000524356	RAB2A	P61019	212 aa		3.02	□□□□□ -1.93
PCM1-223	ENST00000524356	ESRRG	P62508	458 aa		3.02	□□□□□ -1.93
PCM1-223	ENST00000524356	CRADD	P78560	199 aa		3.02	□□□□□ -1.93
PCM1-223	ENST00000524356	HLA-DRB3	P79483	266 aa		3.02	□□□□□ -1.93
PCM1-223	ENST00000524356	JOSD1	Q15040	202 aa	Predicted RBP	3.02	□□□□□ -1.93
PCM1-223	ENST00000524356	ORMDL2	Q53FV1	153 aa		3.02	□□□□□ -1.93
PCM1-223	ENST00000524356	FAM201A	Q5SY85	155 aa		3.02	□□□□□ -1.93
PCM1-223	ENST00000524356	CYB5R2	Q6BCY4	276 aa		3.02	□□□□□ -1.93
PCM1-223	ENST00000524356	ZNF613	Q6PF04	617 aa		3.02	□□□□□ -1.93
PCM1-223	ENST00000524356	LYPD2	Q6UXB3	125 aa		3.02	□□□□□ -1.93
PCM1-223	ENST00000524356	RNF165	Q6ZSG1	346 aa		3.02	□□□□□ -1.93
PCM1-223	ENST00000524356	OOSP2	Q86WS3	158 aa		3.02	□□□□□ -1.93
PCM1-223	ENST00000524356	DEFB125	Q8N687	156 aa		3.02	□□□□□ -1.93
PCM1-223	ENST00000524356	ZNF645	Q8N7E2	425 aa		3.02	□□□□□ -1.93
PCM1-223	ENST00000524356	OR52L1	Q8NGH7	329 aa		3.02	□□□□□ -1.93
PCM1-223	ENST00000524356	OR2T4	Q8NH00	348 aa		3.02	□□□□□ -1.93
PCM1-223	ENST00000524356	DCUN1D4	Q92564	292 aa		3.02	□□□□□ -1.93
PCM1-223	ENST00000524356	FAM104A	Q969W3	186 aa		3.02	□□□□□ -1.93
PCM1-223	ENST00000524356	SLC35E1	Q96K37	410 aa		3.02	□□□□□ -1.93
PCM1-223	ENST00000524356	C18orf15	Q96N68	181 aa		3.02	□□□□□ -1.93
PCM1-223	ENST00000524356	C2orf88	Q9BSF0	95 aa		3.02	□□□□□ -1.93
PCM1-223	ENST00000524356	GSKIP	Q9P0R6	139 aa		3.02	□□□□□ -1.93
PCM1-223	ENST00000524356	KLF13	Q9Y2Y9	288 aa	Predicted RBP	3.02	□□□□□ -1.93
PCM1-223	ENST00000524356	ZNF780B	Q9Y6R6	833 aa		3.02	□□□□□ -1.93
PCM1-223	ENST00000524356	ZNF407	Q9C0G0	2248 aa		3.02	□□□□□ -1.93
PCM1-223	ENST00000524356	NBEAL2	Q6ZNJ1	2754 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356		A0A1B0GV90	55 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	ZNF705G	A8MUZ8	300 aa	Predicted RBP	3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	NDUFC2-KCTD14	E9PQ53	114 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	GYG2	O15488	501 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	TCF21	O43680	179 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	CD5L	O43866	347 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	MFSD11	O43934	449 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	IGLV2-23	P01705	113 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	IGLV2-8	P01709	118 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	IGHG2	P01859	326 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	GZMH	P20718	246 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	CTBP2	P56545	445 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	GNGT1	P63211	74 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	DCD	P81605	110 aa	Known RBP	3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	FABP5	Q01469	135 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	MEF2C	Q06413	473 aa	Predicted RBP	3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	ERCC8	Q13216	396 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	RSPO1	Q2MKA7	263 aa	Predicted RBP	3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	DEFB113	Q30KQ7	82 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	TMEM128	Q5BJH2	165 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	UBE2NL	Q5JXB2	153 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	C1orf194	Q5T5A4	169 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	TMEM78	Q5T7P6	136 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	GLYAT	Q6IB77	296 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	LCN8	Q6JVE9	175 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356		Q6ZRU5	148 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	ZNF567	Q8N184	647 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	OR2M7	Q8NG81	312 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	OR8S1	Q8NH09	359 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	OR52P1P	Q8NH57	321 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	DNAJC9	Q8WXX5	260 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	OR7D2	Q96RA2	312 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	NRIP2	Q9BQI9	281 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	PAXX	Q9BUH6	204 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	EIF5A2	Q9GZV4	153 aa	Known RBP	3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	RNASE7	Q9H1E1	156 aa	Known RBP	3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	PLEKHF2	Q9H8W4	249 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	TMEM138	Q9NPI0	162 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	PARP11	Q9NR21	331 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	PLSCR3	Q9NRY6	295 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	C14orf105	Q9NVL8	296 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	SS18L2	Q9UHA2	77 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	NUBP2	Q9Y5Y2	271 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	SVEP1	Q4LDE5	3571 aa		3.01	□□□□□ -1.93
PCM1-223	ENST00000524356	IGHV3-74	A0A0B4J1X5	117 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	TRAV17	A0A0B4J275	112 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	FAM236D	A0A1B0GTK5	79 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	hADV38S2	A0JD32	116 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	MAP1LC3B2	A6NCE7	125 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	SIGLEC16	A6NMB1	481 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	KRBOX1	C9JBD0	128 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356		E7EQ34	232 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	ISLR	O14498	428 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	ANGPTL7	O43827	346 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	ZNF354A	O60765	605 aa	Predicted RBP	3	□□□□□ -1.93
PCM1-223	ENST00000524356	GABARAP	O95166	117 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	FAM107A	O95990	144 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	HLA-DPB1	P04440	258 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	IFNA4	P05014	189 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	RBP1	P09455	135 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	FAM236C	P0DP71	79 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	CTLA4	P16410	223 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	IL3RA	P26951	378 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	SDC4	P31431	198 aa		3	□□□□□ -1.93
PCM1-223	ENST00000524356	MP68	P56378	58 aa		3	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms