RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 TAS2R30P59541 319 aa11.91□□□□□ -0.5
LSM1-203ENST00000520755 RPL23AP62750 156 aaKnown RBP11.91□□□□□ -0.5
LSM1-203ENST00000520755 C2orf83Q53S99 150 aa11.91□□□□□ -0.5
LSM1-203ENST00000520755 AKAP14Q86UN6 197 aa11.91□□□□□ -0.5
LSM1-203ENST00000520755 MRPL41Q8IXM3 137 aaKnown RBP11.91□□□□□ -0.5
LSM1-203ENST00000520755 RNF152Q8N8N0 203 aa11.91□□□□□ -0.5
LSM1-203ENST00000520755 OR1P1Q8NH06 330 aa11.91□□□□□ -0.5
LSM1-203ENST00000520755 HIPK2Q9H2X6 1198 aa11.91□□□□□ -0.5
LSM1-203ENST00000520755 ZFP57Q9NU63 452 aa11.91□□□□□ -0.5
LSM1-203ENST00000520755 PSENENQ9NZ42 101 aa11.91□□□□□ -0.5
LSM1-203ENST00000520755 TRBV9A0A0B4J1U6 114 aa11.9□□□□□ -0.5
LSM1-203ENST00000520755 IGSF23A1L1A6 192 aa11.9□□□□□ -0.5
LSM1-203ENST00000520755 PMS2P5A8MQ11 134 aa11.9□□□□□ -0.5
LSM1-203ENST00000520755 ADARB2-AS1A8MUL3 147 aa11.9□□□□□ -0.5
LSM1-203ENST00000520755 NUDT19A8MXV4 375 aa11.9□□□□□ -0.5
LSM1-203ENST00000520755 PRSS46E5RG02 174 aa11.9□□□□□ -0.5
LSM1-203ENST00000520755 M0QZ24 198 aa11.9□□□□□ -0.5
LSM1-203ENST00000520755 BRI3O95415 125 aa11.9□□□□□ -0.5
LSM1-203ENST00000520755 TRGV3P03979 118 aa11.9□□□□□ -0.5
LSM1-203ENST00000520755 RAB9AP51151 201 aa11.9□□□□□ -0.5
LSM1-203ENST00000520755 TPPP2P59282 170 aa11.9□□□□□ -0.5
LSM1-203ENST00000520755 SPANXN5Q5MJ07 72 aa11.9□□□□□ -0.5
LSM1-203ENST00000520755 TMEM14EPQ6UXP3 125 aa11.9□□□□□ -0.5
LSM1-203ENST00000520755 C18orf65Q6ZTR6 163 aa11.9□□□□□ -0.5
LSM1-203ENST00000520755 HAPLN4Q86UW8 402 aa11.9□□□□□ -0.5
LSM1-203ENST00000520755 TCTE3Q8IZS6 198 aa11.9□□□□□ -0.5
LSM1-203ENST00000520755 MYOZ3Q8TDC0 251 aa11.9□□□□□ -0.5
LSM1-203ENST00000520755 LYRM2Q9NU23 88 aaPredicted RBP11.9□□□□□ -0.5
LSM1-203ENST00000520755 FAM24AA6NFZ4 105 aa11.89□□□□□ -0.51
LSM1-203ENST00000520755 E5RGE8 158 aa11.89□□□□□ -0.51
LSM1-203ENST00000520755 H3BUA1 57 aa11.89□□□□□ -0.51
LSM1-203ENST00000520755 L7N2F9 121 aa11.89□□□□□ -0.51
LSM1-203ENST00000520755 IFNA10P01566 189 aa11.89□□□□□ -0.51
LSM1-203ENST00000520755 PET100P0DJ07 73 aa11.89□□□□□ -0.51
LSM1-203ENST00000520755 SNCAP37840 140 aa11.89□□□□□ -0.51
LSM1-203ENST00000520755 VAMP2P63027 116 aa11.89□□□□□ -0.51
LSM1-203ENST00000520755 KLHL30-AS1Q8NEE0 82 aa11.89□□□□□ -0.51
LSM1-203ENST00000520755 OR11H4Q8NGC9 324 aa11.89□□□□□ -0.51
LSM1-203ENST00000520755 SLA2Q9H6Q3 261 aa11.89□□□□□ -0.51
LSM1-203ENST00000520755 U3KQ87 197 aa11.89□□□□□ -0.51
LSM1-203ENST00000520755 K7EIM0 57 aa11.88□□□□□ -0.51
LSM1-203ENST00000520755 OR2J3O76001 311 aa11.88□□□□□ -0.51
LSM1-203ENST00000520755 NDUFB8O95169 186 aa11.88□□□□□ -0.51
LSM1-203ENST00000520755 LY86O95711 162 aa11.88□□□□□ -0.51
LSM1-203ENST00000520755 TSPAN15O95858 294 aa11.88□□□□□ -0.51
LSM1-203ENST00000520755 METTL15P1P0C7V9 234 aa11.88□□□□□ -0.51
LSM1-203ENST00000520755 SLC25A4P12235 298 aa11.88□□□□□ -0.51
LSM1-203ENST00000520755 DEFA4P12838 97 aa11.88□□□□□ -0.51
LSM1-203ENST00000520755 PVALBP20472 110 aaPredicted RBP11.88□□□□□ -0.51
LSM1-203ENST00000520755 RHOGP84095 191 aa11.88□□□□□ -0.51
LSM1-203ENST00000520755 FGL1Q08830 312 aa11.88□□□□□ -0.51
LSM1-203ENST00000520755 ARL16Q0P5N6 197 aa11.88□□□□□ -0.51
LSM1-203ENST00000520755 KIAA0141Q14154 515 aaPredicted RBP11.88□□□□□ -0.51
LSM1-203ENST00000520755 OR5B12Q96R08 314 aa11.88□□□□□ -0.51
LSM1-203ENST00000520755 FNDC4Q9H6D8 234 aaPredicted RBP11.88□□□□□ -0.51
LSM1-203ENST00000520755 STRAPQ9Y3F4 350 aaKnown RBP11.88□□□□□ -0.51
LSM1-203ENST00000520755 MFSD2BA6NFX1 497 aa11.87□□□□□ -0.51
LSM1-203ENST00000520755 I3L2K1 104 aa11.87□□□□□ -0.51
LSM1-203ENST00000520755 RLN2P04090 185 aa11.87□□□□□ -0.51
LSM1-203ENST00000520755 P2RY1P47900 373 aa11.87□□□□□ -0.51
LSM1-203ENST00000520755 CDX1P47902 265 aaPredicted RBP11.87□□□□□ -0.51
LSM1-203ENST00000520755 CAV2P51636 162 aa11.87□□□□□ -0.51
LSM1-203ENST00000520755 SLC25A24Q6NUK1 477 aa11.87□□□□□ -0.51
LSM1-203ENST00000520755 C8orf86Q6ZUL3 223 aa11.87□□□□□ -0.51
LSM1-203ENST00000520755 TMEM252Q8N6L7 170 aa11.87□□□□□ -0.51
LSM1-203ENST00000520755 ZNF491Q8N8L2 437 aa11.87□□□□□ -0.51
LSM1-203ENST00000520755 THAP6Q8TBB0 222 aa11.87□□□□□ -0.51
LSM1-203ENST00000520755 DCUN1D4Q92564 292 aa11.87□□□□□ -0.51
LSM1-203ENST00000520755 MISP3Q96FF7 219 aa11.87□□□□□ -0.51
LSM1-203ENST00000520755 BSCL2Q96G97 398 aaPredicted RBP11.87□□□□□ -0.51
LSM1-203ENST00000520755 UBE2E2Q96LR5 201 aa11.87□□□□□ -0.51
LSM1-203ENST00000520755 GNB4Q9HAV0 340 aa11.87□□□□□ -0.51
LSM1-203ENST00000520755 MRPL36Q9P0J6 103 aaKnown RBP11.87□□□□□ -0.51
LSM1-203ENST00000520755 FXYD6-FXYD2A0A087WZ82 144 aa11.86□□□□□ -0.51
LSM1-203ENST00000520755 IGHV3-21A0A0B4J1V1 117 aa11.86□□□□□ -0.51
LSM1-203ENST00000520755 RNF222A6NCQ9 220 aa11.86□□□□□ -0.51
LSM1-203ENST00000520755 IGHV3-11P01762 117 aa11.86□□□□□ -0.51
LSM1-203ENST00000520755 OR8U8P0C7N1 319 aa11.86□□□□□ -0.51
LSM1-203ENST00000520755 SUB1P53999 127 aaKnown RBP eCLIP11.86□□□□□ -0.51
LSM1-203ENST00000520755 ATP5IP56385 69 aaPredicted RBP11.86□□□□□ -0.51
LSM1-203ENST00000520755 EWSR1Q01844 656 aaKnown RBP eCLIP11.86□□□□□ -0.51
LSM1-203ENST00000520755 ETV3LQ6ZN32 361 aa11.86□□□□□ -0.51
LSM1-203ENST00000520755 NECAP1Q8NC96 275 aa11.86□□□□□ -0.51
LSM1-203ENST00000520755 OR4F17Q8NGA8 305 aa11.86□□□□□ -0.51
LSM1-203ENST00000520755 OR1L6Q8NGR2 347 aa11.86□□□□□ -0.51
LSM1-203ENST00000520755 OR4F4Q96R69 305 aa11.86□□□□□ -0.51
LSM1-203ENST00000520755 FBXL7Q9UJT9 491 aa11.86□□□□□ -0.51
LSM1-203ENST00000520755 PAIP2BQ9ULR5 123 aaKnown RBP11.86□□□□□ -0.51
LSM1-203ENST00000520755 TNFSF18Q9UNG2 199 aa11.86□□□□□ -0.51
LSM1-203ENST00000520755 S4R3C0 116 aa11.86□□□□□ -0.51
LSM1-203ENST00000520755 CST7O76096 145 aa11.85□□□□□ -0.51
LSM1-203ENST00000520755 MT-CO2P00403 227 aa11.85□□□□□ -0.51
LSM1-203ENST00000520755 IGHV3-48P01763 117 aa11.85□□□□□ -0.51
LSM1-203ENST00000520755 HIST1H1BP16401 226 aaKnown RBP11.85□□□□□ -0.51
LSM1-203ENST00000520755 MLANAQ16655 118 aa11.85□□□□□ -0.51
LSM1-203ENST00000520755 DEFB136Q30KP8 78 aa11.85□□□□□ -0.51
LSM1-203ENST00000520755 C15orf32Q32M92 178 aa11.85□□□□□ -0.51
LSM1-203ENST00000520755 RNASEH2CQ8TDP1 164 aaKnown RBP11.85□□□□□ -0.51
LSM1-203ENST00000520755 C4orf3Q8WVX3 66 aa11.85□□□□□ -0.51
LSM1-203ENST00000520755 PINX1Q96BK5 328 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms