RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 OR5H6Q8NGV6 325 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 ZNF418Q8TF45 676 aaPredicted RBP2.19□□□□□ -2.06
VPS13B-207ENST00000518569 ACOT12Q8WYK0 555 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 TMEM106AQ96A25 262 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 SLAMF6Q96DU3 332 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 SLC25A44Q96H78 314 aaPredicted RBP2.19□□□□□ -2.06
VPS13B-207ENST00000518569 LINC00477Q96M19 166 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 AP1S3Q96PC3 154 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 NMNAT3Q96T66 252 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 ANAPC13Q9BS18 74 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 PLA2G2FQ9BZM2 168 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 OR2H1Q9GZK4 316 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 IMUPQ9GZP8 106 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 LPAR5Q9H1C0 372 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 RNASE7Q9H1E1 156 aaKnown RBP2.19□□□□□ -2.06
VPS13B-207ENST00000518569 MED28Q9H204 178 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 KCNIP2Q9NS61 270 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 RBFOX1Q9NWB1 397 aaKnown RBP2.19□□□□□ -2.06
VPS13B-207ENST00000518569 TVP23BQ9NYZ1 205 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 MTFP1Q9UDX5 166 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 INSIG2Q9Y5U4 225 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 F11RQ9Y624 299 aaKnown RBP2.19□□□□□ -2.06
VPS13B-207ENST00000518569 RFNGQ9Y644 331 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 PXMP4Q9Y6I8 212 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 V9GYS6 101 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 SLX4Q8IY92 1834 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 SPEF2Q9C093 1822 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 CACNA1AO00555 2505 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 NFASCO94856 1347 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 ADAMTSL1Q8N6G6 1762 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 CPSF1Q10570 1443 aaKnown RBP2.18□□□□□ -2.06
VPS13B-207ENST00000518569 NSD3Q9BZ95 1437 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 HTTP42858 3142 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 IGHV2-26A0A0B4J1V2 119 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 IGKV1D-13A0A0B4J2D9 117 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 LOC389332A0A1B0GUA5 103 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 A0A1B0GXF2 115 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 LRCOL1A6NCL2 159 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 IFITM5A6NNB3 132 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 C9JAW5 83 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 GSTZ1O43708 216 aaPredicted RBP2.18□□□□□ -2.06
VPS13B-207ENST00000518569 KCNK2O95069 426 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 APOMO95445 188 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 CA2P00918 260 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 OR4Q2P0C623 313 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 IGKV1-13P0DP09 117 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 BCL2P10415 239 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 MUC1P15941 1255 aaPredicted RBP2.18□□□□□ -2.06
VPS13B-207ENST00000518569 HIST1H1BP16401 226 aaKnown RBP2.18□□□□□ -2.06
VPS13B-207ENST00000518569 SRIP30626 198 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 GABRA2P47869 451 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 UBE2AP49459 152 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 NCBP2P52298 156 aaKnown RBP eCLIP2.18□□□□□ -2.06
VPS13B-207ENST00000518569 GFERP55789 205 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 COPZ1P61923 177 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 RPS25P62851 125 aaKnown RBP2.18□□□□□ -2.06
VPS13B-207ENST00000518569 CACNG7P62955 275 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 HIST1H1AQ02539 215 aaPredicted RBP2.18□□□□□ -2.06
VPS13B-207ENST00000518569 PLCXD2Q0VAA5 305 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 DHRS2Q13268 280 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 JOSD1Q15040 202 aaPredicted RBP2.18□□□□□ -2.06
VPS13B-207ENST00000518569 Q499Y3 187 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 C6orf52Q5T4I8 152 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 FAM222AQ5U5X8 452 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 NXNL2Q5VZ03 156 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 SCIMPQ6UWF3 145 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 Q6ZSR6 202 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 VN1R4Q7Z5H5 301 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 LRP11Q86VZ4 500 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 ZNF695Q8IW36 515 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 OR52R1Q8NGF1 315 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 OR51T1Q8NGJ9 327 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 PPTC7Q8NI37 304 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 RXFP4Q8TDU9 374 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 DCAKDQ8WVC6 231 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 TWIST2Q8WVJ9 160 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 PTX4Q96A99 478 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 TM4SF18Q96CE8 201 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 MS4A6EQ96DS6 147 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 YPEL4Q96NS1 127 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 TSPAN32Q96QS1 320 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 OR52B2Q96RD2 323 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 RTL8AQ9BWD3 113 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 GNB1LQ9BYB4 327 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 OR2J1Q9GZK6 312 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 OR8D2Q9GZM6 311 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 TMEM222Q9H0R3 208 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 CST9LQ9H4G1 147 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 EDA2RQ9HAV5 297 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 PARP11Q9NR21 331 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 LINC00527Q9UJ94 153 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 HIGD1AQ9Y241 93 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 POMPQ9Y244 141 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 HS3ST2Q9Y278 367 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 SIGLEC7Q9Y286 467 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 MED31Q9Y3C7 131 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 SOX21Q9Y651 276 aaPredicted RBP2.18□□□□□ -2.06
VPS13B-207ENST00000518569 VCANP13611 3396 aa2.18□□□□□ -2.06
VPS13B-207ENST00000518569 SPTBN5Q9NRC6 3674 aaKnown RBP2.17□□□□□ -2.06
VPS13B-207ENST00000518569 RANBP2P49792 3224 aaKnown RBP2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms