RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 MIR17HGQ75NE6 70 aa1.42□□□□□ -2.18
RNU6-840P-201ENST00000517275 DEFB128Q7Z7B8 93 aa1.42□□□□□ -2.18
RNU6-840P-201ENST00000517275 S100A7AQ86SG5 101 aa1.42□□□□□ -2.18
RNU6-840P-201ENST00000517275 DHFR2Q86XF0 187 aa1.42□□□□□ -2.18
RNU6-840P-201ENST00000517275 KRTAP13-1Q8IUC0 172 aa1.42□□□□□ -2.18
RNU6-840P-201ENST00000517275 SPACA4Q8TDM5 124 aa1.42□□□□□ -2.18
RNU6-840P-201ENST00000517275 CEP19Q96LK0 163 aa1.42□□□□□ -2.18
RNU6-840P-201ENST00000517275 SCGB3A1Q96QR1 104 aa1.42□□□□□ -2.18
RNU6-840P-201ENST00000517275 PHB2Q99623 299 aa1.42□□□□□ -2.18
RNU6-840P-201ENST00000517275 HSPB9Q9BQS6 159 aa1.42□□□□□ -2.18
RNU6-840P-201ENST00000517275 TMEM106BQ9NUM4 274 aa1.42□□□□□ -2.18
RNU6-840P-201ENST00000517275 PYCARDQ9ULZ3 195 aa1.42□□□□□ -2.18
RNU6-840P-201ENST00000517275 FAM32AQ9Y421 112 aaKnown RBP1.42□□□□□ -2.18
RNU6-840P-201ENST00000517275 DENND4BO75064 1496 aaPredicted RBP1.42□□□□□ -2.18
RNU6-840P-201ENST00000517275 DOCK3Q8IZD9 2030 aa1.42□□□□□ -2.18
RNU6-840P-201ENST00000517275 HECW2Q9P2P5 1572 aa1.42□□□□□ -2.18
RNU6-840P-201ENST00000517275 KDM5BQ9UGL1 1544 aa1.41□□□□□ -2.18
RNU6-840P-201ENST00000517275 CAMSAP1Q5T5Y3 1602 aa1.41□□□□□ -2.18
RNU6-840P-201ENST00000517275 PTPRSQ13332 1948 aa1.41□□□□□ -2.18
RNU6-840P-201ENST00000517275 TRAPPC13A5PLN9 417 aa1.41□□□□□ -2.18
RNU6-840P-201ENST00000517275 MEIS3P1A6NDR6 274 aa1.41□□□□□ -2.18
RNU6-840P-201ENST00000517275 ZNF860A6NHJ4 632 aa1.41□□□□□ -2.18
RNU6-840P-201ENST00000517275 TRAPPC2LH3BP13 241 aa1.41□□□□□ -2.18
RNU6-840P-201ENST00000517275 TCL1BO95988 128 aa1.41□□□□□ -2.18
RNU6-840P-201ENST00000517275 HTR1AP08908 422 aa1.41□□□□□ -2.18
RNU6-840P-201ENST00000517275 COX6A1P12074 109 aa1.41□□□□□ -2.18
RNU6-840P-201ENST00000517275 CASP1P29466 404 aa1.41□□□□□ -2.18
RNU6-840P-201ENST00000517275 PEBP1P30086 187 aaKnown RBP1.41□□□□□ -2.18
RNU6-840P-201ENST00000517275 PPP1R2P41236 205 aa1.41□□□□□ -2.18
RNU6-840P-201ENST00000517275 RPL19P84098 196 aaKnown RBP1.41□□□□□ -2.18
RNU6-840P-201ENST00000517275 NDUFA5Q16718 116 aa1.41□□□□□ -2.18
RNU6-840P-201ENST00000517275 LINC01554Q52M75 96 aa1.41□□□□□ -2.18
RNU6-840P-201ENST00000517275 PCOTHQ58A44 107 aa1.41□□□□□ -2.18
RNU6-840P-201ENST00000517275 LCE1CQ5T751 118 aa1.41□□□□□ -2.18
RNU6-840P-201ENST00000517275 LCE1BQ5T7P3 118 aa1.41□□□□□ -2.18
RNU6-840P-201ENST00000517275 FAM27BQ5VT28 67 aa1.41□□□□□ -2.18
RNU6-840P-201ENST00000517275 PPP1R2P3Q6NXS1 205 aa1.41□□□□□ -2.18
RNU6-840P-201ENST00000517275 LCA10Q71F78 164 aa1.41□□□□□ -2.18
RNU6-840P-201ENST00000517275 KTN1-AS1Q86SY8 53 aa1.41□□□□□ -2.18
RNU6-840P-201ENST00000517275 TMEM106AQ96A25 262 aa1.41□□□□□ -2.18
RNU6-840P-201ENST00000517275 IMUPQ9GZP8 106 aa1.41□□□□□ -2.18
RNU6-840P-201ENST00000517275 ENY2Q9NPA8 101 aa1.41□□□□□ -2.18
RNU6-840P-201ENST00000517275 C8orf4Q9NR00 106 aa1.41□□□□□ -2.18
RNU6-840P-201ENST00000517275 BAIAP2Q9UQB8 552 aa1.41□□□□□ -2.18
RNU6-840P-201ENST00000517275 LHFPL6Q9Y693 200 aa1.41□□□□□ -2.18
RNU6-840P-201ENST00000517275 VWDEQ8N2E2 1590 aa1.41□□□□□ -2.18
RNU6-840P-201ENST00000517275 MPDZO75970 2070 aa1.41□□□□□ -2.18
RNU6-840P-201ENST00000517275 MDC1Q14676 2089 aaKnown RBP1.41□□□□□ -2.18
RNU6-840P-201ENST00000517275 DISP1Q96F81 1524 aa1.4□□□□□ -2.18
RNU6-840P-201ENST00000517275 RFPL4AA6NLU0 287 aa1.4□□□□□ -2.19
RNU6-840P-201ENST00000517275 IBA57-AS1B1ANH7 110 aa1.4□□□□□ -2.19
RNU6-840P-201ENST00000517275 RFPL4AL1F8VTS6 287 aa1.4□□□□□ -2.19
RNU6-840P-201ENST00000517275 F8W036 122 aa1.4□□□□□ -2.19
RNU6-840P-201ENST00000517275 J3QQQ9 107 aa1.4□□□□□ -2.19
RNU6-840P-201ENST00000517275 IFNA1P01562 189 aa1.4□□□□□ -2.19
RNU6-840P-201ENST00000517275 IGKV1-16P04430 117 aa1.4□□□□□ -2.19
RNU6-840P-201ENST00000517275 P0DMU3 169 aa1.4□□□□□ -2.19
RNU6-840P-201ENST00000517275 FAM231AP0DMU4 169 aa1.4□□□□□ -2.19
RNU6-840P-201ENST00000517275 FAM231CP0DMU5 169 aa1.4□□□□□ -2.19
RNU6-840P-201ENST00000517275 ERP29P30040 261 aaKnown RBP1.4□□□□□ -2.19
RNU6-840P-201ENST00000517275 DEFA1P59665 94 aa1.4□□□□□ -2.19
RNU6-840P-201ENST00000517275 TMEM258P61165 79 aa1.4□□□□□ -2.19
RNU6-840P-201ENST00000517275 YPEL3P61236 119 aaPredicted RBP1.4□□□□□ -2.19
RNU6-840P-201ENST00000517275 RPL26P61254 145 aaKnown RBP1.4□□□□□ -2.19
RNU6-840P-201ENST00000517275 TMEM86AQ8N2M4 240 aa1.4□□□□□ -2.19
RNU6-840P-201ENST00000517275 SLC25A40Q8TBP6 338 aa1.4□□□□□ -2.19
RNU6-840P-201ENST00000517275 DCANP1Q8TF63 244 aa1.4□□□□□ -2.19
RNU6-840P-201ENST00000517275 KRTAP4-4Q9BYR3 166 aa1.4□□□□□ -2.19
RNU6-840P-201ENST00000517275 SH3BGRL3Q9H299 93 aa1.4□□□□□ -2.19
RNU6-840P-201ENST00000517275 SLC39A9Q9NUM3 307 aa1.4□□□□□ -2.19
RNU6-840P-201ENST00000517275 PRNDQ9UKY0 176 aa1.4□□□□□ -2.19
RNU6-840P-201ENST00000517275 RPL26L1Q9UNX3 145 aaKnown RBP1.4□□□□□ -2.19
RNU6-840P-201ENST00000517275 ERGIC3Q9Y282 383 aa1.4□□□□□ -2.19
RNU6-840P-201ENST00000517275 SMARCA4P51532 1647 aa1.4□□□□□ -2.19
RNU6-840P-201ENST00000517275 NOTCH2Q04721 2471 aa1.4□□□□□ -2.19
RNU6-840P-201ENST00000517275 FMN1Q68DA7 1419 aa1.4□□□□□ -2.19
RNU6-840P-201ENST00000517275 ROCK1Q13464 1354 aa1.39□□□□□ -2.19
RNU6-840P-201ENST00000517275 MEIKINA0A087WXM9 373 aa1.39□□□□□ -2.19
RNU6-840P-201ENST00000517275 A0A1B0GVG6 124 aa1.39□□□□□ -2.19
RNU6-840P-201ENST00000517275 HMSDA8MTL9 139 aa1.39□□□□□ -2.19
RNU6-840P-201ENST00000517275 CIAO1O76071 339 aa1.39□□□□□ -2.19
RNU6-840P-201ENST00000517275 RPSAP08865 295 aaKnown RBP1.39□□□□□ -2.19
RNU6-840P-201ENST00000517275 OR4E1P0C645 316 aa1.39□□□□□ -2.19
RNU6-840P-201ENST00000517275 SPI1P17947 270 aa1.39□□□□□ -2.19
RNU6-840P-201ENST00000517275 GNG10P50151 68 aa1.39□□□□□ -2.19
RNU6-840P-201ENST00000517275 TRAPPC6BQ86SZ2 158 aa1.39□□□□□ -2.19
RNU6-840P-201ENST00000517275 C10orf126Q8N4M7 172 aa1.39□□□□□ -2.19
RNU6-840P-201ENST00000517275 OR52R1Q8NGF1 315 aa1.39□□□□□ -2.19
RNU6-840P-201ENST00000517275 OR8B3Q8NGG8 313 aa1.39□□□□□ -2.19
RNU6-840P-201ENST00000517275 CKLFQ9UBR5 152 aa1.39□□□□□ -2.19
RNU6-840P-201ENST00000517275 EPDR1Q9UM22 224 aa1.39□□□□□ -2.19
RNU6-840P-201ENST00000517275 HIVEP2P31629 2446 aa1.39□□□□□ -2.19
RNU6-840P-201ENST00000517275 TOPBP1Q92547 1522 aa1.39□□□□□ -2.19
RNU6-840P-201ENST00000517275 PXDNLA1KZ92 1463 aa1.38□□□□□ -2.19
RNU6-840P-201ENST00000517275 DOCK5Q9H7D0 1870 aa1.38□□□□□ -2.19
RNU6-840P-201ENST00000517275 AIPO00170 330 aa1.38□□□□□ -2.19
RNU6-840P-201ENST00000517275 ZNF737O75373 536 aa1.38□□□□□ -2.19
RNU6-840P-201ENST00000517275 PGLYRP1O75594 196 aaPredicted RBP1.38□□□□□ -2.19
RNU6-840P-201ENST00000517275 PPBPP02775 128 aa1.38□□□□□ -2.19
RNU6-840P-201ENST00000517275 DEFA4P12838 97 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms