RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 GABARAPH6UMI1 98 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 H7BYZ3 331 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 I3L521 148 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 J3QQQ9 107 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 UBFD1O14562 309 aaKnown RBP0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 OVOL1O14753 267 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 TAX1BP3O14907 124 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 SLC22A1O15245 554 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 NDUFB3O43676 98 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 SLC25A20O43772 301 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 ZNF73O43830 326 aaPredicted RBP0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 GNG7O60262 68 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 HIST1H2BKO60814 126 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 LYZL6O75951 148 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 CST7O76096 145 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 NRASP01111 189 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 NPYP01303 97 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 IGF2P01344 180 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 IFNA17P01571 189 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 IGKV1D-33P01593 117 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 IGKV1-33P01594 117 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 IGKV1-5P01602 117 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 IGLV1-47P01700 117 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 IGLV3-25P01717 112 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 IGHV1-46P01743 117 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 IGHV3-7P01780 117 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 IGLV7-43P04211 117 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 PRM2P04554 102 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 APODP05090 189 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 HIST1H2BJP06899 126 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 GPX1P07203 203 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 MSMBP08118 114 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 PAEPP09466 180 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 GIG44P09565 113 aaPredicted RBP0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 OR5AC1P0C628 307 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 TLX1NBP0CAT3 122 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 ZNF286BP0CG31 522 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 IGHV3-30-3P0DP02 117 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 SLC25A16P16260 332 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 ZNF25P17030 456 aaPredicted RBP0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 LGALS3P17931 250 aaKnown RBP0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 FGF7P21781 194 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 CRYGSP22914 178 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 NFYAP23511 347 aaPredicted RBP0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 CRHBPP24387 322 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 KDELR1P24390 212 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 CD24P25063 80 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 NFYBP25208 207 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 PSMB8P28062 276 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 S100A2P29034 98 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 SRP14P37108 136 aaKnown RBP0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 RBMXP38159 391 aaKnown RBP0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 RPL35P42766 123 aaKnown RBP0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 GUCA1AP43080 201 aaPredicted RBP0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 CSN1S1P47710 185 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 EVX1P49640 407 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 RBP2P50120 134 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 TMBIM6P55061 237 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 CMC4P56277 68 aaPredicted RBP0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 NDUFA6P56556 154 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 RBM11P57052 281 aaKnown RBP0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 TAS2R30P59541 319 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 DEFA1P59665 94 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 DEFA3P59666 94 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 GNG2P59768 71 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 KRTAP10-12P60413 245 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 LSM3P62310 102 aaKnown RBP0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 RPS25P62851 125 aaKnown RBP0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 GNB2P62879 340 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 PPP3R1P63098 170 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 UBE2BP63146 152 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 EIF5AP63241 154 aaKnown RBP0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 MYL5Q02045 173 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 HIST1H1AQ02539 215 aaPredicted RBP0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 BSPH1Q075Z2 132 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 SLC38A11Q08AI6 406 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 SYCNQ0VAF6 134 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 BIKQ13323 160 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 TMEM241Q24JQ0 296 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 RRN3P1Q2M238 152 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 LGALS9BQ3B8N2 356 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 SP6Q3SY56 376 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 LINC01554Q52M75 96 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 LUZP6Q538Z0 58 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 OCIAD2Q56VL3 154 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 ZNF678Q5SXM1 525 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 GLYATL3Q5SZD4 288 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 AADACL3Q5VUY0 350 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 C1orf140Q5VVS0 124 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 Q5XG85 94 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 AMMECR1LQ6DCA0 310 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 LGALS9CQ6DKI2 356 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 LAIR2Q6ISS4 152 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 C22orf39Q6P5X5 142 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 ZNF880Q6PDB4 577 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 HAGHLQ6PII5 290 aaPredicted RBP0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 RASL11AQ6T310 242 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 AMTNQ6UX39 209 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 HRCT1Q6UXD1 115 aa0.39□□□□□ -2.35
RNU4-54P-201ENST00000516428 TMEM14EPQ6UXP3 125 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms