RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 SLC35E1Q96K37 410 aa6.06□□□□□ -1.44
SCARNA20.1-201ENST00000516009 RBM14Q96PK6 669 aaKnown RBP6.06□□□□□ -1.44
SCARNA20.1-201ENST00000516009 CITED4Q96RK1 184 aa6.06□□□□□ -1.44
SCARNA20.1-201ENST00000516009 KCNIP2Q9NS61 270 aa6.06□□□□□ -1.44
SCARNA20.1-201ENST00000516009 F11RQ9Y624 299 aaKnown RBP6.06□□□□□ -1.44
SCARNA20.1-201ENST00000516009 SOX21Q9Y651 276 aaPredicted RBP6.06□□□□□ -1.44
SCARNA20.1-201ENST00000516009 CCDC168Q8NDH2 2452 aa6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 CELSR1Q9NYQ6 3014 aa6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 HECTD1Q9ULT8 2610 aa6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 TEX15Q9BXT5 2789 aa6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 IGHV7-81A0A0B4J1V7 117 aa6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 A6NDX4 124 aa6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 NUDT19A8MXV4 375 aa6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 TEX46H3BTG2 121 aa6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 SMAD7O15105 426 aaKnown RBP6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 CYB5BO43169 146 aa6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 TSPAN15O95858 294 aa6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 FSHBP01225 129 aa6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 MBP02144 154 aa6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 DEFA4P12838 97 aa6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 CTRB1P17538 263 aa6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 S100A1P23297 94 aa6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 FHITP49789 147 aa6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 ELLP55199 621 aaPredicted RBP6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 GAMTQ14353 236 aa6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 LY6EQ16553 131 aa6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 TMEM41BQ5BJD5 291 aa6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 FFAR4Q5NUL3 377 aa6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 PVRIGQ6DKI7 326 aa6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 CTRB2Q6GPI1 263 aa6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 ETFRF1Q6IPR1 90 aa6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 TMEM144Q7Z5S9 345 aa6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 TMEM219Q86XT9 240 aa6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 CIARTQ8N365 385 aaPredicted RBP6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 C5orf56Q8N8D9 126 aa6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 C22orf15Q8WYQ4 148 aa6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 ACY3Q96HD9 319 aa6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 MGST2Q99735 147 aa6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 FAM103A1Q9BTL3 118 aaKnown RBP6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 WNT10AQ9GZT5 417 aa6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 HRH4Q9H3N8 390 aa6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 RPRMQ9NS64 109 aa6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 PITPNC1Q9UKF7 332 aa6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 LSM4Q9Y4Z0 139 aaKnown RBP6.05□□□□□ -1.44
SCARNA20.1-201ENST00000516009 FLNAP21333 2647 aaKnown RBP6.04□□□□□ -1.44
SCARNA20.1-201ENST00000516009 MDFIC2A0A1B0GVS7 189 aa6.04□□□□□ -1.44
SCARNA20.1-201ENST00000516009 NPIPB5A8MRT5 1133 aa6.04□□□□□ -1.44
SCARNA20.1-201ENST00000516009 M0QZK8 103 aa6.04□□□□□ -1.44
SCARNA20.1-201ENST00000516009 AGPAT2O15120 278 aa6.04□□□□□ -1.44
SCARNA20.1-201ENST00000516009 CRYGCP07315 174 aa6.04□□□□□ -1.44
SCARNA20.1-201ENST00000516009 H2AFB1P0C5Y9 115 aa6.04□□□□□ -1.44
SCARNA20.1-201ENST00000516009 MFAP2P55001 183 aa6.04□□□□□ -1.44
SCARNA20.1-201ENST00000516009 RAB2AP61019 212 aa6.04□□□□□ -1.44
SCARNA20.1-201ENST00000516009 NDPQ00604 133 aa6.04□□□□□ -1.44
SCARNA20.1-201ENST00000516009 MLANAQ16655 118 aa6.04□□□□□ -1.44
SCARNA20.1-201ENST00000516009 DEFB112Q30KQ8 113 aa6.04□□□□□ -1.44
SCARNA20.1-201ENST00000516009 ACOT6Q3I5F7 207 aaPredicted RBP6.04□□□□□ -1.44
SCARNA20.1-201ENST00000516009 ACSM6Q6P461 480 aa6.04□□□□□ -1.44
SCARNA20.1-201ENST00000516009 IL34Q6ZMJ4 242 aa6.04□□□□□ -1.44
SCARNA20.1-201ENST00000516009 C19orf35Q6ZS72 473 aa6.04□□□□□ -1.44
SCARNA20.1-201ENST00000516009 C9orf139Q6ZV77 190 aa6.04□□□□□ -1.44
SCARNA20.1-201ENST00000516009 C16orf82Q7Z2V1 217 aa6.04□□□□□ -1.44
SCARNA20.1-201ENST00000516009 BCL6BQ8N143 479 aaPredicted RBP6.04□□□□□ -1.44
SCARNA20.1-201ENST00000516009 LFNGQ8NES3 379 aa6.04□□□□□ -1.44
SCARNA20.1-201ENST00000516009 OR2T6Q8NHC8 308 aa6.04□□□□□ -1.44
SCARNA20.1-201ENST00000516009 MARC2Q969Z3 335 aa6.04□□□□□ -1.44
SCARNA20.1-201ENST00000516009 HSPB9Q9BQS6 159 aa6.04□□□□□ -1.44
SCARNA20.1-201ENST00000516009 GGTLC1Q9BX51 225 aa6.04□□□□□ -1.44
SCARNA20.1-201ENST00000516009 FNDC4Q9H6D8 234 aaPredicted RBP6.04□□□□□ -1.44
SCARNA20.1-201ENST00000516009 PXMP4Q9Y6I8 212 aa6.04□□□□□ -1.44
SCARNA20.1-201ENST00000516009 RAB19A4D1S5 217 aa6.03□□□□□ -1.44
SCARNA20.1-201ENST00000516009 BTBD17A6NE02 478 aa6.03□□□□□ -1.44
SCARNA20.1-201ENST00000516009 MFSD2BA6NFX1 497 aa6.03□□□□□ -1.44
SCARNA20.1-201ENST00000516009 ATP6V0E1O15342 81 aa6.03□□□□□ -1.44
SCARNA20.1-201ENST00000516009 MT-CO2P00403 227 aa6.03□□□□□ -1.44
SCARNA20.1-201ENST00000516009 HBE1P02100 147 aa6.03□□□□□ -1.44
SCARNA20.1-201ENST00000516009 M6PRP20645 277 aa6.03□□□□□ -1.44
SCARNA20.1-201ENST00000516009 OR10J1P30954 320 aa6.03□□□□□ -1.44
SCARNA20.1-201ENST00000516009 RPL29P47914 159 aaKnown RBP6.03□□□□□ -1.44
SCARNA20.1-201ENST00000516009 RND2P52198 227 aa6.03□□□□□ -1.44
SCARNA20.1-201ENST00000516009 ASPHD1Q5U4P2 390 aa6.03□□□□□ -1.44
SCARNA20.1-201ENST00000516009 MIC13Q5XKP0 118 aa6.03□□□□□ -1.44
SCARNA20.1-201ENST00000516009 TTC9CQ8N5M4 171 aa6.03□□□□□ -1.44
SCARNA20.1-201ENST00000516009 EIF4E3Q8N5X7 224 aaKnown RBP6.03□□□□□ -1.44
SCARNA20.1-201ENST00000516009 COMMD1Q8N668 190 aa6.03□□□□□ -1.44
SCARNA20.1-201ENST00000516009 THAP8Q8NA92 274 aa6.03□□□□□ -1.44
SCARNA20.1-201ENST00000516009 OR10G4Q8NGN3 311 aa6.03□□□□□ -1.44
SCARNA20.1-201ENST00000516009 OR10G9Q8NGN4 311 aa6.03□□□□□ -1.44
SCARNA20.1-201ENST00000516009 OR10G7Q8NGN6 311 aa6.03□□□□□ -1.44
SCARNA20.1-201ENST00000516009 OR5R1Q8NH85 324 aa6.03□□□□□ -1.44
SCARNA20.1-201ENST00000516009 SGMS2Q8NHU3 365 aa6.03□□□□□ -1.44
SCARNA20.1-201ENST00000516009 LYPD6BQ8NI32 183 aa6.03□□□□□ -1.44
SCARNA20.1-201ENST00000516009 NPIPB3Q92617 1050 aa6.03□□□□□ -1.44
SCARNA20.1-201ENST00000516009 RCC1LQ96I51 464 aaKnown RBP6.03□□□□□ -1.44
SCARNA20.1-201ENST00000516009 TMEM68Q96MH6 324 aa6.03□□□□□ -1.44
SCARNA20.1-201ENST00000516009 TMUB1Q9BVT8 246 aa6.03□□□□□ -1.44
SCARNA20.1-201ENST00000516009 ACTR3CQ9C0K3 210 aaPredicted RBP6.03□□□□□ -1.44
SCARNA20.1-201ENST00000516009 VSIRQ9H7M9 311 aa6.03□□□□□ -1.44
SCARNA20.1-201ENST00000516009 SLC45A2Q9UMX9 530 aa6.03□□□□□ -1.44
SCARNA20.1-201ENST00000516009 DMRT1Q9Y5R6 373 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms