RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 IFNA1P01562 189 aa12.37□□□□□ -0.43
THUMPD3-210ENST00000515662 GPX4P36969 197 aaPredicted RBP12.37□□□□□ -0.43
THUMPD3-210ENST00000515662 RPL27AP46776 148 aaKnown RBP12.37□□□□□ -0.43
THUMPD3-210ENST00000515662 RPL29P47914 159 aaKnown RBP12.37□□□□□ -0.43
THUMPD3-210ENST00000515662 SUB1P53999 127 aaKnown RBP eCLIP12.37□□□□□ -0.43
THUMPD3-210ENST00000515662 B2MP61769 119 aa12.37□□□□□ -0.43
THUMPD3-210ENST00000515662 STPG3Q8N7X2 389 aa12.37□□□□□ -0.43
THUMPD3-210ENST00000515662 CACNG8Q8WXS5 425 aa12.37□□□□□ -0.43
THUMPD3-210ENST00000515662 FBXL15Q9H469 300 aa12.37□□□□□ -0.43
THUMPD3-210ENST00000515662 VAX2Q9UIW0 290 aa12.37□□□□□ -0.43
THUMPD3-210ENST00000515662 URGCP-MRPS24S4R325 110 aa12.37□□□□□ -0.43
THUMPD3-210ENST00000515662 COL12A1Q99715 3063 aa12.37□□□□□ -0.43
THUMPD3-210ENST00000515662 H3BQ15 152 aa12.36□□□□□ -0.43
THUMPD3-210ENST00000515662 OR2C1O95371 312 aa12.36□□□□□ -0.43
THUMPD3-210ENST00000515662 RHEBQ15382 184 aa12.36□□□□□ -0.43
THUMPD3-210ENST00000515662 RNASEH2CQ8TDP1 164 aaKnown RBP12.36□□□□□ -0.43
THUMPD3-210ENST00000515662 TUBA4BQ9H853 241 aa12.36□□□□□ -0.43
THUMPD3-210ENST00000515662 REG1AP05451 166 aa12.36□□□□□ -0.43
THUMPD3-210ENST00000515662 PRR20EP86478 221 aa12.36□□□□□ -0.43
THUMPD3-210ENST00000515662 PRR20CP86479 221 aa12.36□□□□□ -0.43
THUMPD3-210ENST00000515662 PRR20DP86480 221 aa12.36□□□□□ -0.43
THUMPD3-210ENST00000515662 PRR20BP86481 221 aa12.36□□□□□ -0.43
THUMPD3-210ENST00000515662 PRR20AP86496 221 aa12.36□□□□□ -0.43
THUMPD3-210ENST00000515662 MRPL41Q8IXM3 137 aaKnown RBP12.36□□□□□ -0.43
THUMPD3-210ENST00000515662 SLC45A2Q9UMX9 530 aa12.36□□□□□ -0.43
THUMPD3-210ENST00000515662 IGKV1OR2-108A0A075B7D4 117 aa12.35□□□□□ -0.43
THUMPD3-210ENST00000515662 A0A1W2PPV4 95 aa12.35□□□□□ -0.43
THUMPD3-210ENST00000515662 LINC00587B1AMM8 73 aa12.35□□□□□ -0.43
THUMPD3-210ENST00000515662 TOX4O94842 621 aa12.35□□□□□ -0.43
THUMPD3-210ENST00000515662 GNB1P62873 340 aa12.35□□□□□ -0.43
THUMPD3-210ENST00000515662 MINOS1Q5TGZ0 78 aa12.35□□□□□ -0.43
THUMPD3-210ENST00000515662 YPEL4Q96NS1 127 aa12.35□□□□□ -0.43
THUMPD3-210ENST00000515662 MINOS1-NBL1R4GNA1 71 aa12.35□□□□□ -0.43
THUMPD3-210ENST00000515662 FCN1O00602 326 aa12.35□□□□□ -0.43
THUMPD3-210ENST00000515662 CLN5O75503 358 aa12.35□□□□□ -0.43
THUMPD3-210ENST00000515662 FOXH1O75593 365 aa12.35□□□□□ -0.43
THUMPD3-210ENST00000515662 MOSP00540 346 aa12.35□□□□□ -0.43
THUMPD3-210ENST00000515662 LINC00869P0C866 280 aa12.35□□□□□ -0.43
THUMPD3-210ENST00000515662 SSBP2P81877 361 aaPredicted RBP12.35□□□□□ -0.43
THUMPD3-210ENST00000515662 SSX2Q16385 188 aa12.35□□□□□ -0.43
THUMPD3-210ENST00000515662 DYNAPQ8N1N2 210 aa12.35□□□□□ -0.43
THUMPD3-210ENST00000515662 ZNF462Q96JM2 2506 aa12.34□□□□□ -0.43
THUMPD3-210ENST00000515662 OOSP1A8MZH6 123 aa12.34□□□□□ -0.43
THUMPD3-210ENST00000515662 AREGP15514 252 aa12.34□□□□□ -0.43
THUMPD3-210ENST00000515662 MMDQ15546 238 aa12.34□□□□□ -0.43
THUMPD3-210ENST00000515662 TMEM249Q2WGJ8 235 aa12.34□□□□□ -0.43
THUMPD3-210ENST00000515662 PVRIGQ6DKI7 326 aa12.34□□□□□ -0.43
THUMPD3-210ENST00000515662 CCDC144NLQ6NUI1 221 aa12.34□□□□□ -0.43
THUMPD3-210ENST00000515662 SLC35E3Q7Z769 313 aa12.34□□□□□ -0.43
THUMPD3-210ENST00000515662 ZNF114Q8NC26 417 aa12.34□□□□□ -0.43
THUMPD3-210ENST00000515662 OR2T6Q8NHC8 308 aa12.34□□□□□ -0.43
THUMPD3-210ENST00000515662 FAM168AQ92567 244 aa12.34□□□□□ -0.43
THUMPD3-210ENST00000515662 SLC35E1Q96K37 410 aa12.34□□□□□ -0.43
THUMPD3-210ENST00000515662 TBX15Q96SF7 602 aa12.34□□□□□ -0.43
THUMPD3-210ENST00000515662 FNDC4Q9H6D8 234 aaPredicted RBP12.34□□□□□ -0.43
THUMPD3-210ENST00000515662 NIT2Q9NQR4 276 aa12.34□□□□□ -0.43
THUMPD3-210ENST00000515662 MYO18BQ8IUG5 2567 aa12.34□□□□□ -0.43
THUMPD3-210ENST00000515662 TEX22C9J3V5 150 aa12.34□□□□□ -0.43
THUMPD3-210ENST00000515662 CXCL1P09341 107 aa12.34□□□□□ -0.43
THUMPD3-210ENST00000515662 CD24P25063 80 aa12.34□□□□□ -0.43
THUMPD3-210ENST00000515662 TAGLN2P37802 199 aaKnown RBP12.34□□□□□ -0.43
THUMPD3-210ENST00000515662 RPS10P46783 165 aaKnown RBP12.34□□□□□ -0.43
THUMPD3-210ENST00000515662 LGALS4P56470 323 aa12.34□□□□□ -0.43
THUMPD3-210ENST00000515662 SRSF1Q07955 248 aaKnown RBP eCLIP12.34□□□□□ -0.43
THUMPD3-210ENST00000515662 PLGLAQ15195 96 aa12.34□□□□□ -0.43
THUMPD3-210ENST00000515662 NPBQ8NG41 125 aa12.34□□□□□ -0.43
THUMPD3-210ENST00000515662 EAF1Q96JC9 268 aaPredicted RBP12.34□□□□□ -0.43
THUMPD3-210ENST00000515662 PIMREGQ9BSJ6 248 aa12.34□□□□□ -0.43
THUMPD3-210ENST00000515662 MANBALQ9NQG1 85 aa12.34□□□□□ -0.43
THUMPD3-210ENST00000515662 SPTAN1Q13813 2472 aaKnown RBP12.33□□□□□ -0.43
THUMPD3-210ENST00000515662 NBR2O15453 112 aa12.33□□□□□ -0.44
THUMPD3-210ENST00000515662 OR10J1P30954 320 aa12.33□□□□□ -0.44
THUMPD3-210ENST00000515662 PSMB3P49720 205 aa12.33□□□□□ -0.44
THUMPD3-210ENST00000515662 MEF2BQ02080 365 aaPredicted RBP12.33□□□□□ -0.44
THUMPD3-210ENST00000515662 FBLN7Q53RD9 439 aa12.33□□□□□ -0.44
THUMPD3-210ENST00000515662 C10orf105Q8TEF2 133 aa12.33□□□□□ -0.44
THUMPD3-210ENST00000515662 GATAD1Q8WUU5 269 aa12.33□□□□□ -0.44
THUMPD3-210ENST00000515662 ASH1LQ9NR48 2969 aaKnown RBP12.33□□□□□ -0.44
THUMPD3-210ENST00000515662 AKAP6Q13023 2319 aa12.33□□□□□ -0.44
THUMPD3-210ENST00000515662 UBE2E1P51965 193 aa12.33□□□□□ -0.44
THUMPD3-210ENST00000515662 MFAP2P55001 183 aa12.33□□□□□ -0.44
THUMPD3-210ENST00000515662 CD81P60033 236 aa12.33□□□□□ -0.44
THUMPD3-210ENST00000515662 FAM90A2PQ658T7 463 aa12.33□□□□□ -0.44
THUMPD3-210ENST00000515662 ABHD5Q8WTS1 349 aa12.33□□□□□ -0.44
THUMPD3-210ENST00000515662 ACY3Q96HD9 319 aa12.33□□□□□ -0.44
THUMPD3-210ENST00000515662 POLR3KQ9Y2Y1 108 aaPredicted RBP12.33□□□□□ -0.44
THUMPD3-210ENST00000515662 UBR5O95071 2799 aaPredicted RBP12.33□□□□□ -0.44
THUMPD3-210ENST00000515662 VWC2LB2RUY7 222 aa12.32□□□□□ -0.44
THUMPD3-210ENST00000515662 NDUFA3O95167 84 aa12.32□□□□□ -0.44
THUMPD3-210ENST00000515662 APELAP0DMC3 54 aa12.32□□□□□ -0.44
THUMPD3-210ENST00000515662 ATP5J2P56134 94 aa12.32□□□□□ -0.44
THUMPD3-210ENST00000515662 OR2T10Q8NGZ9 312 aa12.32□□□□□ -0.44
THUMPD3-210ENST00000515662 Q8WTZ3 238 aa12.32□□□□□ -0.44
THUMPD3-210ENST00000515662 SRSF12Q8WXF0 261 aaKnown RBP12.32□□□□□ -0.44
THUMPD3-210ENST00000515662 GSN-AS1Q9NRJ2 163 aa12.32□□□□□ -0.44
THUMPD3-210ENST00000515662 TBL2Q9Y4P3 447 aaKnown RBP12.32□□□□□ -0.44
THUMPD3-210ENST00000515662 TGIF2-C20orf24A0A0A6YYL0 155 aa12.32□□□□□ -0.44
THUMPD3-210ENST00000515662 NDUFS8O00217 210 aa12.32□□□□□ -0.44
THUMPD3-210ENST00000515662 FABP1P07148 127 aa12.32□□□□□ -0.44
THUMPD3-210ENST00000515662 STAG3L2P0CL84 134 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms