RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 SGMS2Q8NHU3 365 aa7.54□□□□□ -1.2
TPM3-222ENST00000515609 C17orf50Q8WW18 174 aa7.54□□□□□ -1.2
TPM3-222ENST00000515609 MISP3Q96FF7 219 aa7.54□□□□□ -1.2
TPM3-222ENST00000515609 ATP6V0BQ99437 205 aa7.54□□□□□ -1.2
TPM3-222ENST00000515609 TMUB1Q9BVT8 246 aa7.54□□□□□ -1.2
TPM3-222ENST00000515609 ZNF580Q9UK33 172 aa7.54□□□□□ -1.2
TPM3-222ENST00000515609 ARHGAP32A7KAX9 2087 aa7.53□□□□□ -1.2
TPM3-222ENST00000515609 WNK2Q9Y3S1 2297 aa7.53□□□□□ -1.2
TPM3-222ENST00000515609 A6NDX4 124 aa7.53□□□□□ -1.2
TPM3-222ENST00000515609 CGB1A6NKQ9 187 aa7.53□□□□□ -1.2
TPM3-222ENST00000515609 ZFP92A6NM28 416 aa7.53□□□□□ -1.2
TPM3-222ENST00000515609 CD5LO43866 347 aa7.53□□□□□ -1.2
TPM3-222ENST00000515609 ATP6V1G1O75348 118 aa7.53□□□□□ -1.2
TPM3-222ENST00000515609 FSHBP01225 129 aa7.53□□□□□ -1.2
TPM3-222ENST00000515609 MYOD1P15172 320 aa7.53□□□□□ -1.2
TPM3-222ENST00000515609 SRP14P37108 136 aaKnown RBP7.53□□□□□ -1.2
TPM3-222ENST00000515609 RUNX1Q01196 453 aa7.53□□□□□ -1.2
TPM3-222ENST00000515609 GAMTQ14353 236 aa7.53□□□□□ -1.2
TPM3-222ENST00000515609 MRGPRG-AS1Q2M3A8 158 aa7.53□□□□□ -1.2
TPM3-222ENST00000515609 FFAR4Q5NUL3 377 aa7.53□□□□□ -1.2
TPM3-222ENST00000515609 FAM120AOSQ5T036 256 aa7.53□□□□□ -1.2
TPM3-222ENST00000515609 COMMD7Q86VX2 200 aa7.53□□□□□ -1.2
TPM3-222ENST00000515609 TMEM86BQ8N661 226 aa7.53□□□□□ -1.2
TPM3-222ENST00000515609 TMEM116Q8NCL8 245 aa7.53□□□□□ -1.2
TPM3-222ENST00000515609 OR1L4Q8NGR5 311 aa7.53□□□□□ -1.2
TPM3-222ENST00000515609 CXorf58Q96LI9 332 aa7.53□□□□□ -1.2
TPM3-222ENST00000515609 PFDN5Q99471 154 aa7.53□□□□□ -1.2
TPM3-222ENST00000515609 TXN2Q99757 166 aa7.53□□□□□ -1.2
TPM3-222ENST00000515609 RSG1Q9BU20 258 aa7.53□□□□□ -1.2
TPM3-222ENST00000515609 WNT10AQ9GZT5 417 aa7.53□□□□□ -1.2
TPM3-222ENST00000515609 SH3BGRL3Q9H299 93 aa7.53□□□□□ -1.2
TPM3-222ENST00000515609 SLC39A9Q9NUM3 307 aa7.53□□□□□ -1.2
TPM3-222ENST00000515609 LSM4Q9Y4Z0 139 aaKnown RBP7.53□□□□□ -1.2
TPM3-222ENST00000515609 PTPN13Q12923 2485 aa7.52□□□□□ -1.21
TPM3-222ENST00000515609 ELOA3CA0A087WX78 387 aaPredicted RBP7.52□□□□□ -1.21
TPM3-222ENST00000515609 IGHV7-81A0A0B4J1V7 117 aa7.52□□□□□ -1.21
TPM3-222ENST00000515609 KRBOX1C9JBD0 128 aa7.52□□□□□ -1.21
TPM3-222ENST00000515609 E7EUB6 86 aa7.52□□□□□ -1.21
TPM3-222ENST00000515609 H3BUA1 57 aa7.52□□□□□ -1.21
TPM3-222ENST00000515609 AP4M1O00189 453 aa7.52□□□□□ -1.21
TPM3-222ENST00000515609 AGPAT2O15120 278 aa7.52□□□□□ -1.21
TPM3-222ENST00000515609 AREGP15514 252 aa7.52□□□□□ -1.21
TPM3-222ENST00000515609 CRIP2P52943 208 aaPredicted RBP7.52□□□□□ -1.21
TPM3-222ENST00000515609 TAS2R45P59539 299 aa7.52□□□□□ -1.21
TPM3-222ENST00000515609 RHOBP62745 196 aa7.52□□□□□ -1.21
TPM3-222ENST00000515609 PEA15Q15121 130 aa7.52□□□□□ -1.21
TPM3-222ENST00000515609 ARSJQ5FYB0 599 aaPredicted RBP7.52□□□□□ -1.21
TPM3-222ENST00000515609 HIST2H2BCQ6DN03 193 aa7.52□□□□□ -1.21
TPM3-222ENST00000515609 UNQ5815/PRO19632Q6UWF5 114 aa7.52□□□□□ -1.21
TPM3-222ENST00000515609 SPNS3Q6ZMD2 512 aa7.52□□□□□ -1.21
TPM3-222ENST00000515609 SLC35E3Q7Z769 313 aa7.52□□□□□ -1.21
TPM3-222ENST00000515609 MAPK1IP1LQ8NDC0 245 aa7.52□□□□□ -1.21
TPM3-222ENST00000515609 OR10G4Q8NGN3 311 aa7.52□□□□□ -1.21
TPM3-222ENST00000515609 OR10G9Q8NGN4 311 aa7.52□□□□□ -1.21
TPM3-222ENST00000515609 OR10G7Q8NGN6 311 aa7.52□□□□□ -1.21
TPM3-222ENST00000515609 LYPD6BQ8NI32 183 aa7.52□□□□□ -1.21
TPM3-222ENST00000515609 FAM110DQ8TAY7 271 aaPredicted RBP7.52□□□□□ -1.21
TPM3-222ENST00000515609 VN1R17PQ8TDU5 208 aa7.52□□□□□ -1.21
TPM3-222ENST00000515609 SFT2D1Q8WV19 159 aa7.52□□□□□ -1.21
TPM3-222ENST00000515609 TMEM170AQ8WVE7 144 aa7.52□□□□□ -1.21
TPM3-222ENST00000515609 ACY3Q96HD9 319 aa7.52□□□□□ -1.21
TPM3-222ENST00000515609 ZNF48Q96MX3 618 aaPredicted RBP7.52□□□□□ -1.21
TPM3-222ENST00000515609 CITED4Q96RK1 184 aa7.52□□□□□ -1.21
TPM3-222ENST00000515609 HRH4Q9H3N8 390 aa7.52□□□□□ -1.21
TPM3-222ENST00000515609 PRDM13Q9H4Q3 707 aa7.52□□□□□ -1.21
TPM3-222ENST00000515609 TMEM160Q9NX00 188 aa7.52□□□□□ -1.21
TPM3-222ENST00000515609 PXMP4Q9Y6I8 212 aa7.52□□□□□ -1.21
TPM3-222ENST00000515609 DCHS2Q6V1P9 2916 aa7.51□□□□□ -1.21
TPM3-222ENST00000515609 SMG1Q96Q15 3661 aaKnown RBP7.51□□□□□ -1.21
TPM3-222ENST00000515609 CTXND1A0A1B0GTU2 59 aa7.51□□□□□ -1.21
TPM3-222ENST00000515609 SMAD7O15105 426 aaKnown RBP7.51□□□□□ -1.21
TPM3-222ENST00000515609 BRI3O95415 125 aa7.51□□□□□ -1.21
TPM3-222ENST00000515609 AVPP01185 164 aa7.51□□□□□ -1.21
TPM3-222ENST00000515609 IGF1P05019 195 aa7.51□□□□□ -1.21
TPM3-222ENST00000515609 REG1AP05451 166 aa7.51□□□□□ -1.21
TPM3-222ENST00000515609 IER3P46695 156 aa7.51□□□□□ -1.21
TPM3-222ENST00000515609 MFAP4P55083 255 aa7.51□□□□□ -1.21
TPM3-222ENST00000515609 B2MP61769 119 aa7.51□□□□□ -1.21
TPM3-222ENST00000515609 PMS2P11Q13670 270 aa7.51□□□□□ -1.21
TPM3-222ENST00000515609 DEFB112Q30KQ8 113 aa7.51□□□□□ -1.21
TPM3-222ENST00000515609 ACSM6Q6P461 480 aa7.51□□□□□ -1.21
TPM3-222ENST00000515609 Q6YL49 198 aa7.51□□□□□ -1.21
TPM3-222ENST00000515609 SLC7A5P1Q8MH63 180 aa7.51□□□□□ -1.21
TPM3-222ENST00000515609 THAP8Q8NA92 274 aa7.51□□□□□ -1.21
TPM3-222ENST00000515609 NECAP1Q8NC96 275 aa7.51□□□□□ -1.21
TPM3-222ENST00000515609 BPIFCQ8NFQ6 507 aa7.51□□□□□ -1.21
TPM3-222ENST00000515609 OR4X1Q8NH49 305 aa7.51□□□□□ -1.21
TPM3-222ENST00000515609 SUN5Q8TC36 379 aa7.51□□□□□ -1.21
TPM3-222ENST00000515609 PIFOQ8TCI5 191 aa7.51□□□□□ -1.21
TPM3-222ENST00000515609 GATAD1Q8WUU5 269 aa7.51□□□□□ -1.21
TPM3-222ENST00000515609 MBD3L1Q8WWY6 194 aa7.51□□□□□ -1.21
TPM3-222ENST00000515609 TRGV9Q99603 122 aa7.51□□□□□ -1.21
TPM3-222ENST00000515609 GGTLC1Q9BX51 225 aa7.51□□□□□ -1.21
TPM3-222ENST00000515609 NPFFR1Q9GZQ6 430 aa7.51□□□□□ -1.21
TPM3-222ENST00000515609 VPREB3Q9UKI3 123 aa7.51□□□□□ -1.21
TPM3-222ENST00000515609 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.51□□□□□ -1.21
TPM3-222ENST00000515609 HELZ2Q9BYK8 2649 aaKnown RBP7.5□□□□□ -1.21
TPM3-222ENST00000515609 TRAV41A0A0B4J266 112 aa7.5□□□□□ -1.21
TPM3-222ENST00000515609 A0A1B0GW64 132 aa7.5□□□□□ -1.21
TPM3-222ENST00000515609 TCRBV4S1A1TA0A5B7 111 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms