RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 ZNF462Q96JM2 2506 aa11.94□□□□□ -0.5
VCAN-211ENST00000513984 A0A1W2PRD5 423 aa11.94□□□□□ -0.5
VCAN-211ENST00000513984 A0A1W2PRF3 423 aa11.94□□□□□ -0.5
VCAN-211ENST00000513984 A0A1W2PRM7 423 aa11.94□□□□□ -0.5
VCAN-211ENST00000513984 NDUFS8O00217 210 aa11.94□□□□□ -0.5
VCAN-211ENST00000513984 TSPAN4O14817 238 aa11.94□□□□□ -0.5
VCAN-211ENST00000513984 NBR2O15453 112 aa11.94□□□□□ -0.5
VCAN-211ENST00000513984 STAG3L2P0CL84 134 aa11.94□□□□□ -0.5
VCAN-211ENST00000513984 STAG3L3P0CL85 134 aa11.94□□□□□ -0.5
VCAN-211ENST00000513984 UBE2E1P51965 193 aa11.94□□□□□ -0.5
VCAN-211ENST00000513984 RHEBQ15382 184 aa11.94□□□□□ -0.5
VCAN-211ENST00000513984 C10orf105Q8TEF2 133 aa11.94□□□□□ -0.5
VCAN-211ENST00000513984 FAM168AQ92567 244 aa11.94□□□□□ -0.5
VCAN-211ENST00000513984 EAF1Q96JC9 268 aaPredicted RBP11.94□□□□□ -0.5
VCAN-211ENST00000513984 SRSF8Q9BRL6 282 aaKnown RBP11.94□□□□□ -0.5
VCAN-211ENST00000513984 C7orf77A4D0Y5 90 aa11.93□□□□□ -0.5
VCAN-211ENST00000513984 VWC2LB2RUY7 222 aa11.93□□□□□ -0.5
VCAN-211ENST00000513984 M0R036 132 aa11.93□□□□□ -0.5
VCAN-211ENST00000513984 REG1AP05451 166 aa11.93□□□□□ -0.5
VCAN-211ENST00000513984 AREGP15514 252 aa11.93□□□□□ -0.5
VCAN-211ENST00000513984 OR10J1P30954 320 aa11.93□□□□□ -0.5
VCAN-211ENST00000513984 LGALS4P56470 323 aa11.93□□□□□ -0.5
VCAN-211ENST00000513984 CD81P60033 236 aa11.93□□□□□ -0.5
VCAN-211ENST00000513984 GNB1P62873 340 aa11.93□□□□□ -0.5
VCAN-211ENST00000513984 SSX2Q16385 188 aa11.93□□□□□ -0.5
VCAN-211ENST00000513984 DYNAPQ8N1N2 210 aa11.93□□□□□ -0.5
VCAN-211ENST00000513984 SRSF12Q8WXF0 261 aaKnown RBP11.93□□□□□ -0.5
VCAN-211ENST00000513984 H3BQ15 152 aa11.93□□□□□ -0.5
VCAN-211ENST00000513984 FCN1O00602 326 aa11.93□□□□□ -0.5
VCAN-211ENST00000513984 SNRNP70P08621 437 aaKnown RBP11.93□□□□□ -0.5
VCAN-211ENST00000513984 CEBPGP53567 150 aa11.93□□□□□ -0.5
VCAN-211ENST00000513984 RHOBP62745 196 aa11.93□□□□□ -0.5
VCAN-211ENST00000513984 SRSF1Q07955 248 aaKnown RBP eCLIP11.93□□□□□ -0.5
VCAN-211ENST00000513984 PLGLAQ15195 96 aa11.93□□□□□ -0.5
VCAN-211ENST00000513984 OR2T10Q8NGZ9 312 aa11.93□□□□□ -0.5
VCAN-211ENST00000513984 OR1P1Q8NH06 330 aa11.93□□□□□ -0.5
VCAN-211ENST00000513984 OR2T6Q8NHC8 308 aa11.93□□□□□ -0.5
VCAN-211ENST00000513984 PUS1Q9Y606 427 aaKnown RBP eCLIP11.93□□□□□ -0.5
VCAN-211ENST00000513984 CXorf1O96002 111 aa11.92□□□□□ -0.5
VCAN-211ENST00000513984 CRYGCP07315 174 aa11.92□□□□□ -0.5
VCAN-211ENST00000513984 PAX6P26367 422 aa11.92□□□□□ -0.5
VCAN-211ENST00000513984 MFAP2P55001 183 aa11.92□□□□□ -0.5
VCAN-211ENST00000513984 EBI3Q14213 229 aa11.92□□□□□ -0.5
VCAN-211ENST00000513984 ETFRF1Q6IPR1 90 aa11.92□□□□□ -0.5
VCAN-211ENST00000513984 Q8N6K4 173 aa11.92□□□□□ -0.5
VCAN-211ENST00000513984 THAP8Q8NA92 274 aa11.92□□□□□ -0.5
VCAN-211ENST00000513984 ABHD5Q8WTS1 349 aa11.92□□□□□ -0.5
VCAN-211ENST00000513984 GATAD1Q8WUU5 269 aa11.92□□□□□ -0.5
VCAN-211ENST00000513984 NIPSNAP3BQ9BS92 247 aa11.92□□□□□ -0.5
VCAN-211ENST00000513984 C20orf24Q9BUV8 137 aa11.92□□□□□ -0.5
VCAN-211ENST00000513984 RPS10P5Q9NQ39 176 aa11.92□□□□□ -0.5
VCAN-211ENST00000513984 F11RQ9Y624 299 aaKnown RBP11.92□□□□□ -0.5
VCAN-211ENST00000513984 TMEM250H0YL14 139 aa11.91□□□□□ -0.5
VCAN-211ENST00000513984 CORTO00230 105 aa11.91□□□□□ -0.5
VCAN-211ENST00000513984 ARL14EPLP0DKL9 152 aa11.91□□□□□ -0.5
VCAN-211ENST00000513984 ATP5J2P56134 94 aa11.91□□□□□ -0.5
VCAN-211ENST00000513984 AKIRIN2Q53H80 203 aa11.91□□□□□ -0.5
VCAN-211ENST00000513984 FBLN7Q53RD9 439 aa11.91□□□□□ -0.5
VCAN-211ENST00000513984 CLEC2AQ6UVW9 174 aa11.91□□□□□ -0.5
VCAN-211ENST00000513984 SPNS3Q6ZMD2 512 aa11.91□□□□□ -0.5
VCAN-211ENST00000513984 IQCF2Q8IXL9 164 aa11.91□□□□□ -0.5
VCAN-211ENST00000513984 C17orf50Q8WW18 174 aa11.91□□□□□ -0.5
VCAN-211ENST00000513984 ACY3Q96HD9 319 aa11.91□□□□□ -0.5
VCAN-211ENST00000513984 SEPSECSQ9HD40 501 aaKnown RBP11.91□□□□□ -0.5
VCAN-211ENST00000513984 SMCO4Q9NRQ5 59 aa11.91□□□□□ -0.5
VCAN-211ENST00000513984 IGHV4-61A0A0C4DH41 118 aa11.9□□□□□ -0.5
VCAN-211ENST00000513984 PAGE4O60829 102 aa11.9□□□□□ -0.5
VCAN-211ENST00000513984 CD24P25063 80 aa11.9□□□□□ -0.5
VCAN-211ENST00000513984 HES1Q14469 280 aa11.9□□□□□ -0.5
VCAN-211ENST00000513984 C5orf64Q2M2E5 130 aa11.9□□□□□ -0.5
VCAN-211ENST00000513984 CYP2G1PQ6ZSU1 146 aa11.9□□□□□ -0.5
VCAN-211ENST00000513984 MALSU1Q96EH3 234 aa11.9□□□□□ -0.5
VCAN-211ENST00000513984 TVP23CQ96ET8 276 aa11.9□□□□□ -0.5
VCAN-211ENST00000513984 AJUBAQ96IF1 538 aa11.9□□□□□ -0.5
VCAN-211ENST00000513984 C19orf24Q9BVV8 132 aa11.9□□□□□ -0.5
VCAN-211ENST00000513984 LPAR2Q9HBW0 351 aa11.9□□□□□ -0.5
VCAN-211ENST00000513984 UBR5O95071 2799 aaPredicted RBP11.9□□□□□ -0.5
VCAN-211ENST00000513984 AKR1C3P42330 323 aa11.9□□□□□ -0.5
VCAN-211ENST00000513984 SPATA31B1PQ5VZV4 182 aa11.9□□□□□ -0.5
VCAN-211ENST00000513984 NANPQ8TBE9 248 aa11.9□□□□□ -0.5
VCAN-211ENST00000513984 NPIPB3Q92617 1050 aa11.9□□□□□ -0.5
VCAN-211ENST00000513984 MRPL36Q9P0J6 103 aaKnown RBP11.9□□□□□ -0.5
VCAN-211ENST00000513984 EPG5Q9HCE0 2579 aa11.89□□□□□ -0.51
VCAN-211ENST00000513984 ASH1LQ9NR48 2969 aaKnown RBP11.89□□□□□ -0.51
VCAN-211ENST00000513984 IGKV1D-37A0A075B6S9 117 aa11.89□□□□□ -0.51
VCAN-211ENST00000513984 OR5G3P0C626 314 aa11.89□□□□□ -0.51
VCAN-211ENST00000513984 APELAP0DMC3 54 aa11.89□□□□□ -0.51
VCAN-211ENST00000513984 PAX1P15863 534 aa11.89□□□□□ -0.51
VCAN-211ENST00000513984 GATA2P23769 480 aaPredicted RBP11.89□□□□□ -0.51
VCAN-211ENST00000513984 PAX8Q06710 450 aa11.89□□□□□ -0.51
VCAN-211ENST00000513984 MISP3Q96FF7 219 aa11.89□□□□□ -0.51
VCAN-211ENST00000513984 TUBA4BQ9H853 241 aa11.89□□□□□ -0.51
VCAN-211ENST00000513984 FUT9Q9Y231 359 aa11.89□□□□□ -0.51
VCAN-211ENST00000513984 TCRBV4S1A1TA0A5B7 111 aa11.88□□□□□ -0.51
VCAN-211ENST00000513984 PSMB11A5LHX3 300 aa11.88□□□□□ -0.51
VCAN-211ENST00000513984 CNIH1O95406 144 aa11.88□□□□□ -0.51
VCAN-211ENST00000513984 MT-CO2P00403 227 aa11.88□□□□□ -0.51
VCAN-211ENST00000513984 RND2P52198 227 aa11.88□□□□□ -0.51
VCAN-211ENST00000513984 PNRC1Q12796 327 aaPredicted RBP11.88□□□□□ -0.51
VCAN-211ENST00000513984 FAM78BQ5VT40 261 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms