RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 TPSG1Q9NRR2 321 aa6.69□□□□□ -1.34
RNF4-220ENST00000513578 SLC45A2Q9UMX9 530 aa6.69□□□□□ -1.34
RNF4-220ENST00000513578 PXMP4Q9Y6I8 212 aa6.69□□□□□ -1.34
RNF4-220ENST00000513578 DOPEY2Q9Y3R5 2298 aa6.69□□□□□ -1.34
RNF4-220ENST00000513578 WNK2Q9Y3S1 2297 aa6.69□□□□□ -1.34
RNF4-220ENST00000513578 LRBAP50851 2863 aa6.68□□□□□ -1.34
RNF4-220ENST00000513578 ABCA2Q9BZC7 2435 aa6.68□□□□□ -1.34
RNF4-220ENST00000513578 ZFHX3Q15911 3703 aa6.68□□□□□ -1.34
RNF4-220ENST00000513578 IGHV4-61A0A0C4DH41 118 aa6.68□□□□□ -1.34
RNF4-220ENST00000513578 SMCO3A2RU48 225 aa6.68□□□□□ -1.34
RNF4-220ENST00000513578 TEX22C9J3V5 150 aa6.68□□□□□ -1.34
RNF4-220ENST00000513578 LINC00869P0C866 280 aa6.68□□□□□ -1.34
RNF4-220ENST00000513578 OR13C7P0DN81 318 aa6.68□□□□□ -1.34
RNF4-220ENST00000513578 BCL2P10415 239 aa6.68□□□□□ -1.34
RNF4-220ENST00000513578 BRS3P32247 399 aa6.68□□□□□ -1.34
RNF4-220ENST00000513578 CDC34P49427 236 aaPredicted RBP6.68□□□□□ -1.34
RNF4-220ENST00000513578 PSMB3P49720 205 aa6.68□□□□□ -1.34
RNF4-220ENST00000513578 DEFA5Q01523 94 aa6.68□□□□□ -1.34
RNF4-220ENST00000513578 PRB3Q04118 309 aaPredicted RBP6.68□□□□□ -1.34
RNF4-220ENST00000513578 TNXAQ16473 311 aa6.68□□□□□ -1.34
RNF4-220ENST00000513578 GUCA2BQ16661 112 aa6.68□□□□□ -1.34
RNF4-220ENST00000513578 C5orf64Q2M2E5 130 aa6.68□□□□□ -1.34
RNF4-220ENST00000513578 C10orf55Q5SWW7 151 aa6.68□□□□□ -1.34
RNF4-220ENST00000513578 LCN15Q6UWW0 184 aa6.68□□□□□ -1.34
RNF4-220ENST00000513578 SSX7Q7RTT5 188 aa6.68□□□□□ -1.34
RNF4-220ENST00000513578 SLC16A13Q7RTY0 426 aa6.68□□□□□ -1.34
RNF4-220ENST00000513578 RAB24Q969Q5 203 aa6.68□□□□□ -1.34
RNF4-220ENST00000513578 NKX6-2Q9C056 277 aaPredicted RBP6.68□□□□□ -1.34
RNF4-220ENST00000513578 FBXL15Q9H469 300 aa6.68□□□□□ -1.34
RNF4-220ENST00000513578 MANBALQ9NQG1 85 aa6.68□□□□□ -1.34
RNF4-220ENST00000513578 VAX2Q9UIW0 290 aa6.68□□□□□ -1.34
RNF4-220ENST00000513578 HILPDAQ9Y5L2 63 aa6.68□□□□□ -1.34
RNF4-220ENST00000513578 F11RQ9Y624 299 aaKnown RBP6.68□□□□□ -1.34
RNF4-220ENST00000513578 NPFFO15130 113 aa6.67□□□□□ -1.34
RNF4-220ENST00000513578 STAG3L2P0CL84 134 aa6.67□□□□□ -1.34
RNF4-220ENST00000513578 STAG3L3P0CL85 134 aa6.67□□□□□ -1.34
RNF4-220ENST00000513578 GATA3P23771 443 aa6.67□□□□□ -1.34
RNF4-220ENST00000513578 B2MP61769 119 aa6.67□□□□□ -1.34
RNF4-220ENST00000513578 SELENOTP62341 195 aa6.67□□□□□ -1.34
RNF4-220ENST00000513578 MMDQ15546 238 aa6.67□□□□□ -1.34
RNF4-220ENST00000513578 SSX2Q16385 188 aa6.67□□□□□ -1.34
RNF4-220ENST00000513578 KLK9Q2XQG4 91 aa6.67□□□□□ -1.34
RNF4-220ENST00000513578 MIC13Q5XKP0 118 aa6.67□□□□□ -1.34
RNF4-220ENST00000513578 FAM122CQ6P4D5 195 aa6.67□□□□□ -1.34
RNF4-220ENST00000513578 ZNF562Q6V9R5 426 aa6.67□□□□□ -1.34
RNF4-220ENST00000513578 SLC35E3Q7Z769 313 aa6.67□□□□□ -1.34
RNF4-220ENST00000513578 LRRC75A-AS1Q8N1F1 130 aa6.67□□□□□ -1.34
RNF4-220ENST00000513578 DYNAPQ8N1N2 210 aa6.67□□□□□ -1.34
RNF4-220ENST00000513578 SUN5Q8TC36 379 aa6.67□□□□□ -1.34
RNF4-220ENST00000513578 SRSF12Q8WXF0 261 aaKnown RBP6.67□□□□□ -1.34
RNF4-220ENST00000513578 RNF2Q99496 336 aa6.67□□□□□ -1.34
RNF4-220ENST00000513578 RARRES2Q99969 163 aa6.67□□□□□ -1.34
RNF4-220ENST00000513578 TXNDC17Q9BRA2 123 aa6.67□□□□□ -1.34
RNF4-220ENST00000513578 BEX4Q9NWD9 120 aaPredicted RBP6.67□□□□□ -1.34
RNF4-220ENST00000513578 C1RLQ9NZP8 487 aa6.67□□□□□ -1.34
RNF4-220ENST00000513578 KLK9Q9UKQ9 250 aa6.67□□□□□ -1.34
RNF4-220ENST00000513578 DCHS2Q6V1P9 2916 aa6.66□□□□□ -1.34
RNF4-220ENST00000513578 IGKV1OR2-108A0A075B7D4 117 aa6.66□□□□□ -1.34
RNF4-220ENST00000513578 IGHV4-30-2A0A087WSY4 118 aa6.66□□□□□ -1.34
RNF4-220ENST00000513578 CENPVL3A0A0U1RRI6 287 aa6.66□□□□□ -1.34
RNF4-220ENST00000513578 A0A1W2PPV4 95 aa6.66□□□□□ -1.34
RNF4-220ENST00000513578 DNASE2O00115 360 aaPredicted RBP6.66□□□□□ -1.34
RNF4-220ENST00000513578 FCN1O00602 326 aa6.66□□□□□ -1.34
RNF4-220ENST00000513578 SCO1O75880 301 aa6.66□□□□□ -1.34
RNF4-220ENST00000513578 FBP1P09467 338 aa6.66□□□□□ -1.34
RNF4-220ENST00000513578 FAM106CPP0CH98 169 aa6.66□□□□□ -1.34
RNF4-220ENST00000513578 CTRB1P17538 263 aa6.66□□□□□ -1.34
RNF4-220ENST00000513578 RHOBP62745 196 aa6.66□□□□□ -1.34
RNF4-220ENST00000513578 HAGHQ16775 308 aa6.66□□□□□ -1.34
RNF4-220ENST00000513578 KRTAP21-3Q3LHN1 58 aa6.66□□□□□ -1.34
RNF4-220ENST00000513578 SOHLH1Q5JUK2 328 aa6.66□□□□□ -1.34
RNF4-220ENST00000513578 CTRB2Q6GPI1 263 aa6.66□□□□□ -1.34
RNF4-220ENST00000513578 ATRAIDQ6UW56 229 aa6.66□□□□□ -1.34
RNF4-220ENST00000513578 STPG3Q8N7X2 389 aa6.66□□□□□ -1.34
RNF4-220ENST00000513578 TMEM116Q8NCL8 245 aa6.66□□□□□ -1.34
RNF4-220ENST00000513578 CLRN3Q8NCR9 226 aa6.66□□□□□ -1.34
RNF4-220ENST00000513578 NANPQ8TBE9 248 aa6.66□□□□□ -1.34
RNF4-220ENST00000513578 MEGF9Q9H1U4 602 aa6.66□□□□□ -1.34
RNF4-220ENST00000513578 FNDC4Q9H6D8 234 aaPredicted RBP6.66□□□□□ -1.34
RNF4-220ENST00000513578 SLC25A22Q9H936 323 aa6.66□□□□□ -1.34
RNF4-220ENST00000513578 GNG13Q9P2W3 67 aa6.66□□□□□ -1.34
RNF4-220ENST00000513578 ARL2-SNX15V9GYD0 113 aa6.66□□□□□ -1.34
RNF4-220ENST00000513578 DNHD1Q96M86 4753 aa6.66□□□□□ -1.34
RNF4-220ENST00000513578 FLNCQ14315 2725 aa6.66□□□□□ -1.34
RNF4-220ENST00000513578 AKAP6Q13023 2319 aa6.65□□□□□ -1.34
RNF4-220ENST00000513578 A0A096LNT2 108 aa6.65□□□□□ -1.34
RNF4-220ENST00000513578 TRAV20A0A0B4J274 112 aa6.65□□□□□ -1.34
RNF4-220ENST00000513578 IGHV1-69DA0A0B4J2H0 117 aa6.65□□□□□ -1.34
RNF4-220ENST00000513578 A0A1B0GV50 99 aa6.65□□□□□ -1.34
RNF4-220ENST00000513578 TCRBV4S1A1TA0A5B7 111 aa6.65□□□□□ -1.34
RNF4-220ENST00000513578 PSMB11A5LHX3 300 aa6.65□□□□□ -1.34
RNF4-220ENST00000513578 NPIPB5A8MRT5 1133 aa6.65□□□□□ -1.34
RNF4-220ENST00000513578 B4DSR2 109 aa6.65□□□□□ -1.34
RNF4-220ENST00000513578 TMEM250H0YL14 139 aa6.65□□□□□ -1.34
RNF4-220ENST00000513578 CXorf1O96002 111 aa6.65□□□□□ -1.34
RNF4-220ENST00000513578 MT-CO2P00403 227 aa6.65□□□□□ -1.34
RNF4-220ENST00000513578 IGHV1-69P01742 117 aa6.65□□□□□ -1.34
RNF4-220ENST00000513578 HLA-DRB1P01911 266 aa6.65□□□□□ -1.34
RNF4-220ENST00000513578 MSMBP08118 114 aa6.65□□□□□ -1.34
RNF4-220ENST00000513578 AREGP15514 252 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms