RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 SLC25A24Q6NUK1 477 aa7.22□□□□□ -1.25
NR1I3-230ENST00000511944 WFDC11Q8NEX6 87 aa7.22□□□□□ -1.25
NR1I3-230ENST00000511944 TMEM170AQ8WVE7 144 aa7.22□□□□□ -1.25
NR1I3-230ENST00000511944 C17orf50Q8WW18 174 aa7.22□□□□□ -1.25
NR1I3-230ENST00000511944 TAF15Q92804 592 aaKnown RBP eCLIP7.22□□□□□ -1.25
NR1I3-230ENST00000511944 BSCL2Q96G97 398 aaPredicted RBP7.22□□□□□ -1.25
NR1I3-230ENST00000511944 RASL11BQ9BPW5 248 aa7.22□□□□□ -1.25
NR1I3-230ENST00000511944 HINT2Q9BX68 163 aa7.22□□□□□ -1.25
NR1I3-230ENST00000511944 SMIM3Q9BZL3 60 aa7.22□□□□□ -1.25
NR1I3-230ENST00000511944 WDR61Q9GZS3 305 aaKnown RBP7.22□□□□□ -1.25
NR1I3-230ENST00000511944 NPVFQ9HCQ7 196 aa7.22□□□□□ -1.25
NR1I3-230ENST00000511944 FBXO7Q9Y3I1 522 aa7.22□□□□□ -1.25
NR1I3-230ENST00000511944 F11RQ9Y624 299 aaKnown RBP7.22□□□□□ -1.25
NR1I3-230ENST00000511944 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.22□□□□□ -1.25
NR1I3-230ENST00000511944 UTP20O75691 2785 aaKnown RBP7.21□□□□□ -1.25
NR1I3-230ENST00000511944 A0A1B0GW64 132 aa7.21□□□□□ -1.26
NR1I3-230ENST00000511944 A6NDX4 124 aa7.21□□□□□ -1.26
NR1I3-230ENST00000511944 CD5LO43866 347 aa7.21□□□□□ -1.26
NR1I3-230ENST00000511944 CNIH1O95406 144 aa7.21□□□□□ -1.26
NR1I3-230ENST00000511944 BRI3O95415 125 aa7.21□□□□□ -1.26
NR1I3-230ENST00000511944 TSPAN15O95858 294 aa7.21□□□□□ -1.26
NR1I3-230ENST00000511944 MBP02144 154 aa7.21□□□□□ -1.26
NR1I3-230ENST00000511944 NMBP08949 121 aa7.21□□□□□ -1.26
NR1I3-230ENST00000511944 OR13C7P0DN81 318 aa7.21□□□□□ -1.26
NR1I3-230ENST00000511944 ATP6V0CP27449 155 aa7.21□□□□□ -1.26
NR1I3-230ENST00000511944 CX3CL1P78423 397 aa7.21□□□□□ -1.26
NR1I3-230ENST00000511944 PJVKQ0ZLH3 352 aa7.21□□□□□ -1.26
NR1I3-230ENST00000511944 FXYD3Q14802 87 aa7.21□□□□□ -1.26
NR1I3-230ENST00000511944 SPINK9Q5DT21 86 aa7.21□□□□□ -1.26
NR1I3-230ENST00000511944 RUSC1-AS1Q66K80 236 aa7.21□□□□□ -1.26
NR1I3-230ENST00000511944 HIST2H2BCQ6DN03 193 aa7.21□□□□□ -1.26
NR1I3-230ENST00000511944 BRD3OSQ6XYD6 125 aa7.21□□□□□ -1.26
NR1I3-230ENST00000511944 TMEM144Q7Z5S9 345 aa7.21□□□□□ -1.26
NR1I3-230ENST00000511944 C5orf56Q8N8D9 126 aa7.21□□□□□ -1.26
NR1I3-230ENST00000511944 PIFOQ8TCI5 191 aa7.21□□□□□ -1.26
NR1I3-230ENST00000511944 TMED6Q8WW62 240 aa7.21□□□□□ -1.26
NR1I3-230ENST00000511944 ARPC1AQ92747 370 aa7.21□□□□□ -1.26
NR1I3-230ENST00000511944 P2RX4Q99571 388 aa7.21□□□□□ -1.26
NR1I3-230ENST00000511944 PARP11Q9NR21 331 aa7.21□□□□□ -1.26
NR1I3-230ENST00000511944 LSM4Q9Y4Z0 139 aaKnown RBP7.21□□□□□ -1.26
NR1I3-230ENST00000511944 TACC2O95359 2948 aa7.21□□□□□ -1.26
NR1I3-230ENST00000511944 CELSR2Q9HCU4 2923 aa7.21□□□□□ -1.26
NR1I3-230ENST00000511944 CRYBG3Q68DQ2 2970 aa7.21□□□□□ -1.26
NR1I3-230ENST00000511944 CREBBPQ92793 2442 aa7.21□□□□□ -1.26
NR1I3-230ENST00000511944 CENPEQ02224 2701 aa7.2□□□□□ -1.26
NR1I3-230ENST00000511944 KRTAP9-6A0A140TA67 174 aa7.2□□□□□ -1.26
NR1I3-230ENST00000511944 BTBD17A6NE02 478 aa7.2□□□□□ -1.26
NR1I3-230ENST00000511944 NCBP2LA6PVI3 153 aaKnown RBP7.2□□□□□ -1.26
NR1I3-230ENST00000511944 E7EUB6 86 aa7.2□□□□□ -1.26
NR1I3-230ENST00000511944 FAM157CP0CG43 387 aa7.2□□□□□ -1.26
NR1I3-230ENST00000511944 HIST1H1BP16401 226 aaKnown RBP7.2□□□□□ -1.26
NR1I3-230ENST00000511944 CTRB1P17538 263 aa7.2□□□□□ -1.26
NR1I3-230ENST00000511944 HNF1AP20823 631 aa7.2□□□□□ -1.26
NR1I3-230ENST00000511944 OPRK1P41145 380 aa7.2□□□□□ -1.26
NR1I3-230ENST00000511944 CD69Q07108 199 aa7.2□□□□□ -1.26
NR1I3-230ENST00000511944 CTRB2Q6GPI1 263 aa7.2□□□□□ -1.26
NR1I3-230ENST00000511944 TEPPQ6URK8 271 aa7.2□□□□□ -1.26
NR1I3-230ENST00000511944 TTC9CQ8N5M4 171 aa7.2□□□□□ -1.26
NR1I3-230ENST00000511944 TMEM86BQ8N661 226 aa7.2□□□□□ -1.26
NR1I3-230ENST00000511944 COMMD1Q8N668 190 aa7.2□□□□□ -1.26
NR1I3-230ENST00000511944 ZNF709Q8N972 641 aa7.2□□□□□ -1.26
NR1I3-230ENST00000511944 HSD17B11Q8NBQ5 300 aa7.2□□□□□ -1.26
NR1I3-230ENST00000511944 OR10W1Q8NGF6 305 aa7.2□□□□□ -1.26
NR1I3-230ENST00000511944 SGMS2Q8NHU3 365 aa7.2□□□□□ -1.26
NR1I3-230ENST00000511944 SSMEM1Q8WWF3 244 aa7.2□□□□□ -1.26
NR1I3-230ENST00000511944 C22orf15Q8WYQ4 148 aa7.2□□□□□ -1.26
NR1I3-230ENST00000511944 ATP6V0BQ99437 205 aa7.2□□□□□ -1.26
NR1I3-230ENST00000511944 SSX3Q99909 188 aa7.2□□□□□ -1.26
NR1I3-230ENST00000511944 SLC25A33Q9BSK2 321 aa7.2□□□□□ -1.26
NR1I3-230ENST00000511944 ABCA12Q86UK0 2595 aa7.19□□□□□ -1.26
NR1I3-230ENST00000511944 IGHV7-81A0A0B4J1V7 117 aa7.19□□□□□ -1.26
NR1I3-230ENST00000511944 UBE2L5PA0A1B0GUS4 154 aa7.19□□□□□ -1.26
NR1I3-230ENST00000511944 TEX46H3BTG2 121 aa7.19□□□□□ -1.26
NR1I3-230ENST00000511944 MYOD1P15172 320 aa7.19□□□□□ -1.26
NR1I3-230ENST00000511944 SELENOTP62341 195 aa7.19□□□□□ -1.26
NR1I3-230ENST00000511944 HNF4GQ14541 408 aa7.19□□□□□ -1.26
NR1I3-230ENST00000511944 C21orf62-AS1Q17RA5 79 aa7.19□□□□□ -1.26
NR1I3-230ENST00000511944 AKIRIN2Q53H80 203 aa7.19□□□□□ -1.26
NR1I3-230ENST00000511944 C10orf55Q5SWW7 151 aa7.19□□□□□ -1.26
NR1I3-230ENST00000511944 AKR1C8PQ5T2L2 129 aa7.19□□□□□ -1.26
NR1I3-230ENST00000511944 BTNL8Q6UX41 500 aa7.19□□□□□ -1.26
NR1I3-230ENST00000511944 CLEC9AQ6UXN8 241 aa7.19□□□□□ -1.26
NR1I3-230ENST00000511944 EIF4E3Q8N5X7 224 aaKnown RBP7.19□□□□□ -1.26
NR1I3-230ENST00000511944 TMEM116Q8NCL8 245 aa7.19□□□□□ -1.26
NR1I3-230ENST00000511944 LFNGQ8NES3 379 aa7.19□□□□□ -1.26
NR1I3-230ENST00000511944 LYPD6BQ8NI32 183 aa7.19□□□□□ -1.26
NR1I3-230ENST00000511944 SLC35E1Q96K37 410 aa7.19□□□□□ -1.26
NR1I3-230ENST00000511944 ZNF48Q96MX3 618 aaPredicted RBP7.19□□□□□ -1.26
NR1I3-230ENST00000511944 C19orf24Q9BVV8 132 aa7.19□□□□□ -1.26
NR1I3-230ENST00000511944 NPCDR1Q9BY65 106 aa7.19□□□□□ -1.26
NR1I3-230ENST00000511944 THYN1Q9P016 225 aa7.19□□□□□ -1.26
NR1I3-230ENST00000511944 GCN1Q92616 2671 aaKnown RBP7.19□□□□□ -1.26
NR1I3-230ENST00000511944 ARHGAP32A7KAX9 2087 aa7.18□□□□□ -1.26
NR1I3-230ENST00000511944 TRAV1-1A0A0B4J248 108 aa7.18□□□□□ -1.26
NR1I3-230ENST00000511944 NPIPB6E9PJ23 425 aa7.18□□□□□ -1.26
NR1I3-230ENST00000511944 H3BUA1 57 aa7.18□□□□□ -1.26
NR1I3-230ENST00000511944 H3BUX3 64 aa7.18□□□□□ -1.26
NR1I3-230ENST00000511944 FCN1O00602 326 aa7.18□□□□□ -1.26
NR1I3-230ENST00000511944 SCGB2A1O75556 95 aa7.18□□□□□ -1.26
NR1I3-230ENST00000511944 IGHG2P01859 326 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms