RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 PTPN13Q12923 2485 aa12.06□□□□□ -0.48
SCLT1-209ENST00000511426 DOPEY2Q9Y3R5 2298 aa12.06□□□□□ -0.48
SCLT1-209ENST00000511426 IGHV7-81A0A0B4J1V7 117 aa12.06□□□□□ -0.48
SCLT1-209ENST00000511426 GAMTQ14353 236 aa12.06□□□□□ -0.48
SCLT1-209ENST00000511426 TTC9CQ8N5M4 171 aa12.06□□□□□ -0.48
SCLT1-209ENST00000511426 MGST2Q99735 147 aa12.06□□□□□ -0.48
SCLT1-209ENST00000511426 HRH4Q9H3N8 390 aa12.06□□□□□ -0.48
SCLT1-209ENST00000511426 RPRMQ9NS64 109 aa12.06□□□□□ -0.48
SCLT1-209ENST00000511426 IGHV3OR16-10A0A075B7F0 116 aa12.05□□□□□ -0.48
SCLT1-209ENST00000511426 AGPAT2O15120 278 aa12.05□□□□□ -0.48
SCLT1-209ENST00000511426 SELENOTP62341 195 aa12.05□□□□□ -0.48
SCLT1-209ENST00000511426 KLK9Q2XQG4 91 aa12.05□□□□□ -0.48
SCLT1-209ENST00000511426 FFAR4Q5NUL3 377 aa12.05□□□□□ -0.48
SCLT1-209ENST00000511426 TMEM116Q8NCL8 245 aa12.05□□□□□ -0.48
SCLT1-209ENST00000511426 OR5R1Q8NH85 324 aa12.05□□□□□ -0.48
SCLT1-209ENST00000511426 SGMS2Q8NHU3 365 aa12.05□□□□□ -0.48
SCLT1-209ENST00000511426 MBD3L1Q8WWY6 194 aa12.05□□□□□ -0.48
SCLT1-209ENST00000511426 C19orf24Q9BVV8 132 aa12.05□□□□□ -0.48
SCLT1-209ENST00000511426 SMDT1Q9H4I9 107 aa12.05□□□□□ -0.48
SCLT1-209ENST00000511426 THYN1Q9P016 225 aa12.05□□□□□ -0.48
SCLT1-209ENST00000511426 KLK9Q9UKQ9 250 aa12.05□□□□□ -0.48
SCLT1-209ENST00000511426 TNCP24821 2201 aa12.04□□□□□ -0.48
SCLT1-209ENST00000511426 A6NDX4 124 aa12.04□□□□□ -0.48
SCLT1-209ENST00000511426 KRBOX1C9JBD0 128 aa12.04□□□□□ -0.48
SCLT1-209ENST00000511426 DEFA4P12838 97 aa12.04□□□□□ -0.48
SCLT1-209ENST00000511426 CRIP2P52943 208 aaPredicted RBP12.04□□□□□ -0.48
SCLT1-209ENST00000511426 FBLN7Q53RD9 439 aa12.04□□□□□ -0.48
SCLT1-209ENST00000511426 THAP8Q8NA92 274 aa12.04□□□□□ -0.48
SCLT1-209ENST00000511426 WFDC11Q8NEX6 87 aa12.04□□□□□ -0.48
SCLT1-209ENST00000511426 PBDC1Q9BVG4 233 aa12.04□□□□□ -0.48
SCLT1-209ENST00000511426 ACTR3CQ9C0K3 210 aaPredicted RBP12.04□□□□□ -0.48
SCLT1-209ENST00000511426 ANKRD17O75179 2603 aaKnown RBP12.04□□□□□ -0.48
SCLT1-209ENST00000511426 SEC14L6B5MCN3 397 aa12.03□□□□□ -0.48
SCLT1-209ENST00000511426 HIST1H1BP16401 226 aaKnown RBP12.03□□□□□ -0.48
SCLT1-209ENST00000511426 PRR20EP86478 221 aa12.03□□□□□ -0.48
SCLT1-209ENST00000511426 PRR20CP86479 221 aa12.03□□□□□ -0.48
SCLT1-209ENST00000511426 PRR20DP86480 221 aa12.03□□□□□ -0.48
SCLT1-209ENST00000511426 PRR20BP86481 221 aa12.03□□□□□ -0.48
SCLT1-209ENST00000511426 PRR20AP86496 221 aa12.03□□□□□ -0.48
SCLT1-209ENST00000511426 PMS2P11Q13670 270 aa12.03□□□□□ -0.48
SCLT1-209ENST00000511426 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.03□□□□□ -0.482e-8■■■■□ 24.1
SCLT1-209ENST00000511426 ACSM6Q6P461 480 aa12.03□□□□□ -0.48
SCLT1-209ENST00000511426 MAPK1IP1LQ8NDC0 245 aa12.03□□□□□ -0.48
SCLT1-209ENST00000511426 WNT10AQ9GZT5 417 aa12.03□□□□□ -0.48
SCLT1-209ENST00000511426 FNDC4Q9H6D8 234 aaPredicted RBP12.03□□□□□ -0.48
SCLT1-209ENST00000511426 WNK2Q9Y3S1 2297 aa12.03□□□□□ -0.48
SCLT1-209ENST00000511426 PXMP4Q9Y6I8 212 aa12.03□□□□□ -0.48
SCLT1-209ENST00000511426 NAV2Q8IVL1 2488 aa12.03□□□□□ -0.48
SCLT1-209ENST00000511426 PRRC2AP48634 2157 aaKnown RBP12.03□□□□□ -0.48
SCLT1-209ENST00000511426 TENM4Q6N022 2769 aa12.03□□□□□ -0.48
SCLT1-209ENST00000511426 CTXND1A0A1B0GTU2 59 aa12.03□□□□□ -0.48
SCLT1-209ENST00000511426 REG1AP05451 166 aa12.03□□□□□ -0.48
SCLT1-209ENST00000511426 FHITP49789 147 aa12.03□□□□□ -0.48
SCLT1-209ENST00000511426 B2MP61769 119 aa12.03□□□□□ -0.48
SCLT1-209ENST00000511426 NDPQ00604 133 aa12.03□□□□□ -0.48
SCLT1-209ENST00000511426 AKIRIN2Q53H80 203 aa12.03□□□□□ -0.48
SCLT1-209ENST00000511426 OR10G4Q8NGN3 311 aa12.03□□□□□ -0.48
SCLT1-209ENST00000511426 OR10G9Q8NGN4 311 aa12.03□□□□□ -0.48
SCLT1-209ENST00000511426 OR10G7Q8NGN6 311 aa12.03□□□□□ -0.48
SCLT1-209ENST00000511426 MISP3Q96FF7 219 aa12.03□□□□□ -0.48
SCLT1-209ENST00000511426 RCC1LQ96I51 464 aaKnown RBP12.03□□□□□ -0.48
SCLT1-209ENST00000511426 PRDM13Q9H4Q3 707 aa12.03□□□□□ -0.48
SCLT1-209ENST00000511426 ZNF580Q9UK33 172 aa12.03□□□□□ -0.48
SCLT1-209ENST00000511426 SLC45A2Q9UMX9 530 aa12.03□□□□□ -0.48
SCLT1-209ENST00000511426 H3BUX3 64 aa12.02□□□□□ -0.49
SCLT1-209ENST00000511426 TAGLN2P37802 199 aaKnown RBP12.02□□□□□ -0.49
SCLT1-209ENST00000511426 MFAP2P55001 183 aa12.02□□□□□ -0.49
SCLT1-209ENST00000511426 ELLP55199 621 aaPredicted RBP12.02□□□□□ -0.49
SCLT1-209ENST00000511426 RPP25LQ8N5L8 163 aaKnown RBP12.02□□□□□ -0.49
SCLT1-209ENST00000511426 FAM110DQ8TAY7 271 aaPredicted RBP12.02□□□□□ -0.49
SCLT1-209ENST00000511426 ZNF48Q96MX3 618 aaPredicted RBP12.02□□□□□ -0.49
SCLT1-209ENST00000511426 FAM210AQ96ND0 272 aa12.02□□□□□ -0.49
SCLT1-209ENST00000511426 SLC39A9Q9NUM3 307 aa12.02□□□□□ -0.49
SCLT1-209ENST00000511426 RFNGQ9Y644 331 aa12.02□□□□□ -0.49
SCLT1-209ENST00000511426 IGLV11-55A0A075B6I3 123 aa12.01□□□□□ -0.49
SCLT1-209ENST00000511426 I3L2K1 104 aa12.01□□□□□ -0.49
SCLT1-209ENST00000511426 I3L521 148 aa12.01□□□□□ -0.49
SCLT1-209ENST00000511426 MT-CO2P00403 227 aa12.01□□□□□ -0.49
SCLT1-209ENST00000511426 ASPHD1Q5U4P2 390 aa12.01□□□□□ -0.49
SCLT1-209ENST00000511426 SPSB3Q6PJ21 355 aa12.01□□□□□ -0.49
SCLT1-209ENST00000511426 STPG3Q8N7X2 389 aa12.01□□□□□ -0.49
SCLT1-209ENST00000511426 OR4X1Q8NH49 305 aa12.01□□□□□ -0.49
SCLT1-209ENST00000511426 SFT2D1Q8WV19 159 aa12.01□□□□□ -0.49
SCLT1-209ENST00000511426 RNF2Q99496 336 aa12.01□□□□□ -0.49
SCLT1-209ENST00000511426 TRGV9Q99603 122 aa12.01□□□□□ -0.49
SCLT1-209ENST00000511426 CR1P17927 2039 aa12.01□□□□□ -0.49
SCLT1-209ENST00000511426 UTP20O75691 2785 aaKnown RBP12.01□□□□□ -0.49
SCLT1-209ENST00000511426 TCRBV4S1A1TA0A5B7 111 aa12□□□□□ -0.49
SCLT1-209ENST00000511426 ANKRD34BA5PLL1 514 aa12□□□□□ -0.49
SCLT1-209ENST00000511426 NDUFS6O75380 124 aaKnown RBP12□□□□□ -0.49
SCLT1-209ENST00000511426 SCGB2A1O75556 95 aa12□□□□□ -0.49
SCLT1-209ENST00000511426 FABP1P07148 127 aa12□□□□□ -0.49
SCLT1-209ENST00000511426 EGR2P11161 476 aaPredicted RBP12□□□□□ -0.49
SCLT1-209ENST00000511426 CYP2G1PQ6ZSU1 146 aa12□□□□□ -0.49
SCLT1-209ENST00000511426 ACY3Q96HD9 319 aa12□□□□□ -0.49
SCLT1-209ENST00000511426 MED13LQ71F56 2210 aa12□□□□□ -0.49
SCLT1-209ENST00000511426 CRYBG3Q68DQ2 2970 aa12□□□□□ -0.49
SCLT1-209ENST00000511426 IGKV1OR2-108A0A075B7D4 117 aa12□□□□□ -0.49
SCLT1-209ENST00000511426 MAP1LC3B2A6NCE7 125 aa12□□□□□ -0.49
SCLT1-209ENST00000511426 BRI3O95415 125 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 193 ms