RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 RNASEH2CQ8TDP1 164 aaKnown RBP3.83□□□□□ -1.8
PDLIM5-214ENST00000510099 RPEQ96AT9 228 aa3.83□□□□□ -1.8
PDLIM5-214ENST00000510099 FAM122AQ96E09 287 aa3.83□□□□□ -1.8
PDLIM5-214ENST00000510099 OR4F4Q96R69 305 aa3.83□□□□□ -1.8
PDLIM5-214ENST00000510099 RNF5Q99942 180 aa3.83□□□□□ -1.8
PDLIM5-214ENST00000510099 TXNDC17Q9BRA2 123 aa3.83□□□□□ -1.8
PDLIM5-214ENST00000510099 PARLQ9H300 379 aa3.83□□□□□ -1.8
PDLIM5-214ENST00000510099 TMEM242Q9NWH2 141 aa3.83□□□□□ -1.8
PDLIM5-214ENST00000510099 ONECUT1Q9UBC0 465 aa3.83□□□□□ -1.8
PDLIM5-214ENST00000510099 PRELID1Q9Y255 219 aa3.83□□□□□ -1.8
PDLIM5-214ENST00000510099 HCFC1P51610 2035 aa3.83□□□□□ -1.8
PDLIM5-214ENST00000510099 DIDO1Q9BTC0 2240 aaKnown RBP3.83□□□□□ -1.8
PDLIM5-214ENST00000510099 HIVEP3Q5T1R4 2406 aa3.83□□□□□ -1.8
PDLIM5-214ENST00000510099 SMG1Q96Q15 3661 aaKnown RBP3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 TNCP24821 2201 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 TET2Q6N021 2002 aaPredicted RBP3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 LOC105371242A0A075B767 164 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 IGHV3-72A0A0B4J1Y9 119 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 PSMB11A5LHX3 300 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 ZNF727A8MUV8 499 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 C1orf196B1AJZ1 125 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 TEX22C9J3V5 150 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 VENTXO95231 258 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 CRYGCP07315 174 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 GNLYP22749 145 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 NPPCP23582 126 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 PRTN3P24158 256 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 OR10J1P30954 320 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 RPL27AP46776 148 aaKnown RBP3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 ATP5G3P48201 142 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 COMPP49747 757 aaPredicted RBP3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 SUB1P53999 127 aaKnown RBP eCLIP3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 RPL23P62829 140 aaKnown RBP3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 GNB1P62873 340 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 SSBP2P81877 361 aaPredicted RBP3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 PRB3Q04118 309 aaPredicted RBP3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 ELOBQ15370 118 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 TMEM241Q24JQ0 296 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 ZNF674Q2M3X9 581 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 LDLRAD2Q5SZI1 272 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 TPTE2P1Q5T6R2 138 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 HCP5Q6MZN7 132 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 FAM24BQ8N5W8 94 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 THAP8Q8NA92 274 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 NANPQ8TBE9 248 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 ABHD5Q8WTS1 349 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 Q8WTZ3 238 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 C11orf52Q96A22 123 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 RPUSD4Q96CM3 377 aaKnown RBP3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 RITA1Q96K30 269 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 SSX3Q99909 188 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 C19orf24Q9BVV8 132 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 SSBP3Q9BWW4 388 aaPredicted RBP3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 MRPL32Q9BYC8 188 aaKnown RBP3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 CTDSP1Q9GZU7 261 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 FNDC4Q9H6D8 234 aaPredicted RBP3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 SEPSECSQ9HD40 501 aaKnown RBP3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 BIN3Q9NQY0 253 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 DOK5Q9P104 306 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 FUT9Q9Y231 359 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 SIGLEC9Q9Y336 463 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 NBEAQ8NFP9 2946 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 COL6A6A6NMZ7 2263 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 DOCK11Q5JSL3 2073 aa3.82□□□□□ -1.8
PDLIM5-214ENST00000510099 ZZEF1O43149 2961 aa3.81□□□□□ -1.8
PDLIM5-214ENST00000510099 TRBV24-1A0A075B6N3 115 aa3.81□□□□□ -1.8
PDLIM5-214ENST00000510099 IGKV1D-37A0A075B6S9 117 aa3.81□□□□□ -1.8
PDLIM5-214ENST00000510099 ADARB2-AS1A8MUL3 147 aa3.81□□□□□ -1.8
PDLIM5-214ENST00000510099 CLDN34H7C241 214 aa3.81□□□□□ -1.8
PDLIM5-214ENST00000510099 C19orf84I3L1E1 186 aa3.81□□□□□ -1.8
PDLIM5-214ENST00000510099 TIMM23O14925 209 aa3.81□□□□□ -1.8
PDLIM5-214ENST00000510099 ENSAO43768 121 aaKnown RBP3.81□□□□□ -1.8
PDLIM5-214ENST00000510099 CLN5O75503 358 aa3.81□□□□□ -1.8
PDLIM5-214ENST00000510099 NDUFA3O95167 84 aa3.81□□□□□ -1.8
PDLIM5-214ENST00000510099 GOSR1O95249 250 aa3.81□□□□□ -1.8
PDLIM5-214ENST00000510099 MT-CO2P00403 227 aa3.81□□□□□ -1.8
PDLIM5-214ENST00000510099 IGHV2-5P01817 119 aa3.81□□□□□ -1.8
PDLIM5-214ENST00000510099 CXCL1P09341 107 aa3.81□□□□□ -1.8
PDLIM5-214ENST00000510099 AREGP15514 252 aa3.81□□□□□ -1.8
PDLIM5-214ENST00000510099 CNTFRP26992 372 aa3.81□□□□□ -1.8
PDLIM5-214ENST00000510099 HTR1DP28221 377 aa3.81□□□□□ -1.8
PDLIM5-214ENST00000510099 CDKN1AP38936 164 aa3.81□□□□□ -1.8
PDLIM5-214ENST00000510099 GPR6P46095 362 aaPredicted RBP3.81□□□□□ -1.8
PDLIM5-214ENST00000510099 EFNA4P52798 201 aa3.81□□□□□ -1.8
PDLIM5-214ENST00000510099 MFAP2P55001 183 aa3.81□□□□□ -1.8
PDLIM5-214ENST00000510099 BPIFB3P59826 476 aa3.81□□□□□ -1.8
PDLIM5-214ENST00000510099 UBE2G2P60604 165 aa3.81□□□□□ -1.8
PDLIM5-214ENST00000510099 KLRD1Q13241 179 aa3.81□□□□□ -1.8
PDLIM5-214ENST00000510099 ADIRFQ15847 76 aa3.81□□□□□ -1.8
PDLIM5-214ENST00000510099 TNXAQ16473 311 aa3.81□□□□□ -1.8
PDLIM5-214ENST00000510099 FAM78BQ5VT40 261 aa3.81□□□□□ -1.8
PDLIM5-214ENST00000510099 ETFRF1Q6IPR1 90 aa3.81□□□□□ -1.8
PDLIM5-214ENST00000510099 ZNF343Q6P1L6 599 aa3.81□□□□□ -1.8
PDLIM5-214ENST00000510099 PQLC2Q6ZP29 291 aa3.81□□□□□ -1.8
PDLIM5-214ENST00000510099 C1orf122Q6ZSJ8 110 aa3.81□□□□□ -1.8
PDLIM5-214ENST00000510099 MIR17HGQ75NE6 70 aa3.81□□□□□ -1.8
PDLIM5-214ENST00000510099 C16orf82Q7Z2V1 217 aa3.81□□□□□ -1.8
PDLIM5-214ENST00000510099 ZFP82Q8N141 532 aa3.81□□□□□ -1.8
PDLIM5-214ENST00000510099 OR51G1Q8NGK1 321 aa3.81□□□□□ -1.8
PDLIM5-214ENST00000510099 OR1P1Q8NH06 330 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms