RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 Q6ZQT7 251 aa1.16□□□□□ -2.22
XRCC4-204ENST00000509268 LYZL2Q7Z4W2 148 aa1.16□□□□□ -2.22
XRCC4-204ENST00000509268 KTN1-AS1Q86SY8 53 aa1.16□□□□□ -2.22
XRCC4-204ENST00000509268 LYPD6Q86Y78 171 aa1.16□□□□□ -2.22
XRCC4-204ENST00000509268 RPRMLQ8N4K4 120 aa1.16□□□□□ -2.22
XRCC4-204ENST00000509268 ZNF561Q8N587 486 aa1.16□□□□□ -2.22
XRCC4-204ENST00000509268 OR4D11Q8NGI4 311 aa1.16□□□□□ -2.22
XRCC4-204ENST00000509268 CLDND2Q8NHS1 167 aa1.16□□□□□ -2.22
XRCC4-204ENST00000509268 SMCR5Q8TEV8 140 aa1.16□□□□□ -2.22
XRCC4-204ENST00000509268 SLAMF6Q96DU3 332 aa1.16□□□□□ -2.22
XRCC4-204ENST00000509268 GPX7Q96SL4 187 aaPredicted RBP1.16□□□□□ -2.22
XRCC4-204ENST00000509268 MGLLQ99685 303 aa1.16□□□□□ -2.22
XRCC4-204ENST00000509268 SEC22CQ9BRL7 303 aa1.16□□□□□ -2.22
XRCC4-204ENST00000509268 DOHHQ9BU89 302 aa1.16□□□□□ -2.22
XRCC4-204ENST00000509268 IMUPQ9GZP8 106 aa1.16□□□□□ -2.22
XRCC4-204ENST00000509268 TMEM133Q9H2Q1 129 aa1.16□□□□□ -2.22
XRCC4-204ENST00000509268 VCXQ9H320 206 aa1.16□□□□□ -2.22
XRCC4-204ENST00000509268 RNF122Q9H9V4 155 aa1.16□□□□□ -2.22
XRCC4-204ENST00000509268 SPANXA1Q9NS26 97 aa1.16□□□□□ -2.22
XRCC4-204ENST00000509268 MCTS1Q9ULC4 181 aaKnown RBP1.16□□□□□ -2.22
XRCC4-204ENST00000509268 RBM7Q9Y580 266 aaKnown RBP1.16□□□□□ -2.22
XRCC4-204ENST00000509268 PLXNB1O43157 2135 aa1.16□□□□□ -2.22
XRCC4-204ENST00000509268 NID2Q14112 1375 aa1.16□□□□□ -2.22
XRCC4-204ENST00000509268 RFX7Q2KHR2 1363 aa1.16□□□□□ -2.22
XRCC4-204ENST00000509268 TONSLQ96HA7 1378 aa1.16□□□□□ -2.22
XRCC4-204ENST00000509268 ZNF106Q9H2Y7 1883 aaKnown RBP1.16□□□□□ -2.22
XRCC4-204ENST00000509268 PKD1L2Q7Z442 2459 aa1.16□□□□□ -2.22
XRCC4-204ENST00000509268 FBN1P35555 2871 aaKnown RBP1.15□□□□□ -2.22
XRCC4-204ENST00000509268 FMN1Q68DA7 1419 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 IGHV3-15A0A0B4J1V0 119 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 IGHV3-73A0A0B4J1V6 119 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 IGKV1-9A0A0C4DH69 117 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 GGT3PA6NGU5 568 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 ZNF98A6NK75 572 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 C1orf196B1AJZ1 125 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 TAX1BP3O14907 124 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 BET1O15155 118 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 PFDN1O60925 122 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 PGLYRP1O75594 196 aaPredicted RBP1.15□□□□□ -2.23
XRCC4-204ENST00000509268 GADD45GO95257 159 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 IFNA10P01566 189 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 APOA2P02652 100 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 IGKV1-16P04430 117 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 OGNP20774 298 aaKnown RBP1.15□□□□□ -2.23
XRCC4-204ENST00000509268 FKBP2P26885 142 aaKnown RBP1.15□□□□□ -2.23
XRCC4-204ENST00000509268 CASP1P29466 404 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 CCR2P41597 374 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 SRP9P49458 86 aaKnown RBP1.15□□□□□ -2.23
XRCC4-204ENST00000509268 EVX1P49640 407 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 TAS2R20P59543 309 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 FOXF1Q12946 379 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 RRN3P1Q2M238 152 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 LINC01554Q52M75 96 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 LYRM7Q5U5X0 104 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 C2orf91Q6ZV80 131 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 LHFPL1Q86WI0 220 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 CLVS1Q8IUQ0 354 aaPredicted RBP1.15□□□□□ -2.23
XRCC4-204ENST00000509268 RPP25LQ8N5L8 163 aaKnown RBP1.15□□□□□ -2.23
XRCC4-204ENST00000509268 Q8NAQ8 132 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 APCDD1LQ8NCL9 501 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 C1orf64Q8NEQ6 169 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 BPIFB6Q8NFQ5 453 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 TERB2Q8NHR7 220 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 WFDC5Q8TCV5 224 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 OR2J1Q9GZK6 312 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 AICDAQ9GZX7 198 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 SMDT1Q9H4I9 107 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 TUBA4BQ9H853 241 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 OTORQ9NRC9 128 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 TRAPPC2LQ9UL33 140 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 MED31Q9Y3C7 131 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 NUBP2Q9Y5Y2 271 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 TUBGCP6Q96RT7 1819 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 PLXND1Q9Y4D7 1925 aa1.15□□□□□ -2.23
XRCC4-204ENST00000509268 THADAQ6YHU6 1953 aa1.14□□□□□ -2.23
XRCC4-204ENST00000509268 BCL9O00512 1426 aa1.14□□□□□ -2.23
XRCC4-204ENST00000509268 TECPR2O15040 1411 aa1.14□□□□□ -2.23
XRCC4-204ENST00000509268 UHRF1BP1Q6BDS2 1440 aa1.14□□□□□ -2.23
XRCC4-204ENST00000509268 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.14□□□□□ -2.23
XRCC4-204ENST00000509268 SIPA1L1O43166 1804 aa1.14□□□□□ -2.23
XRCC4-204ENST00000509268 TRAV36DV7A0A075B6V5 113 aa1.14□□□□□ -2.23
XRCC4-204ENST00000509268 A0A1B0GX51 115 aa1.14□□□□□ -2.23
XRCC4-204ENST00000509268 C7orf66A4D0T2 115 aa1.14□□□□□ -2.23
XRCC4-204ENST00000509268 FABP5P3A8MUU1 101 aa1.14□□□□□ -2.23
XRCC4-204ENST00000509268 J3KT08 172 aa1.14□□□□□ -2.23
XRCC4-204ENST00000509268 CYB5BO43169 146 aa1.14□□□□□ -2.23
XRCC4-204ENST00000509268 CST8O60676 142 aa1.14□□□□□ -2.23
XRCC4-204ENST00000509268 C1QAP02745 245 aa1.14□□□□□ -2.23
XRCC4-204ENST00000509268 TRGC2P03986 189 aa1.14□□□□□ -2.23
XRCC4-204ENST00000509268 BPGMP07738 259 aa1.14□□□□□ -2.23
XRCC4-204ENST00000509268 ZNF22P17026 224 aaPredicted RBP1.14□□□□□ -2.23
XRCC4-204ENST00000509268 NFYBP25208 207 aa1.14□□□□□ -2.23
XRCC4-204ENST00000509268 S100A11P31949 105 aa1.14□□□□□ -2.23
XRCC4-204ENST00000509268 CD200P41217 278 aa1.14□□□□□ -2.23
XRCC4-204ENST00000509268 FXYD7P58549 80 aa1.14□□□□□ -2.23
XRCC4-204ENST00000509268 AP1S1P61966 158 aa1.14□□□□□ -2.23
XRCC4-204ENST00000509268 MEF2BQ02080 365 aaPredicted RBP1.14□□□□□ -2.23
XRCC4-204ENST00000509268 SLC38A11Q08AI6 406 aa1.14□□□□□ -2.23
XRCC4-204ENST00000509268 KRTAP25-1Q3LHN0 102 aa1.14□□□□□ -2.23
XRCC4-204ENST00000509268 ZNF660Q6AZW8 331 aaPredicted RBP1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms