RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 TAF9BQ9HBM6 251 aa2.79□□□□□ -1.96
GYPA-205ENST00000508337 FAIMQ9NVQ4 179 aa2.79□□□□□ -1.96
GYPA-205ENST00000508337 SCN3BQ9NY72 215 aa2.79□□□□□ -1.96
GYPA-205ENST00000508337 VWA8A3KMH1 1905 aa2.79□□□□□ -1.96
GYPA-205ENST00000508337 OVOS2A0A0G2JMS6 1433 aa2.78□□□□□ -1.96
GYPA-205ENST00000508337 FGD6Q6ZV73 1430 aa2.78□□□□□ -1.96
GYPA-205ENST00000508337 IGLV3-12A0A075B6K2 115 aa2.78□□□□□ -1.96
GYPA-205ENST00000508337 TMEM269A0A1B0GVZ9 245 aa2.78□□□□□ -1.96
GYPA-205ENST00000508337 ODAMA1E959 279 aa2.78□□□□□ -1.96
GYPA-205ENST00000508337 PLA2G10O15496 165 aa2.78□□□□□ -1.96
GYPA-205ENST00000508337 OR2T1O43869 369 aa2.78□□□□□ -1.96
GYPA-205ENST00000508337 IGKV1-39P01597 117 aa2.78□□□□□ -1.96
GYPA-205ENST00000508337 IGHV3-11P01762 117 aa2.78□□□□□ -1.96
GYPA-205ENST00000508337 IGKV1D-39P04432 117 aa2.78□□□□□ -1.96
GYPA-205ENST00000508337 UCHL1P09936 223 aa2.78□□□□□ -1.96
GYPA-205ENST00000508337 IGLC6P0CF74 106 aa2.78□□□□□ -1.96
GYPA-205ENST00000508337 CASP1P29466 404 aa2.78□□□□□ -1.96
GYPA-205ENST00000508337 TGFBR1P36897 503 aa2.78□□□□□ -1.96
GYPA-205ENST00000508337 EIF2B2P49770 351 aaKnown RBP2.78□□□□□ -1.96
GYPA-205ENST00000508337 CMC4P56277 68 aaPredicted RBP2.78□□□□□ -1.96
GYPA-205ENST00000508337 HOXC5Q00444 222 aa2.78□□□□□ -1.96
GYPA-205ENST00000508337 EIF3IQ13347 325 aaKnown RBP2.78□□□□□ -1.96
GYPA-205ENST00000508337 LINC00303Q3SY05 128 aa2.78□□□□□ -1.96
GYPA-205ENST00000508337 SP6Q3SY56 376 aa2.78□□□□□ -1.96
GYPA-205ENST00000508337 NCMAPQ5T1S8 102 aa2.78□□□□□ -1.96
GYPA-205ENST00000508337 BCL2L15Q5TBC7 163 aa2.78□□□□□ -1.96
GYPA-205ENST00000508337 GLIPR1L1Q6UWM5 242 aa2.78□□□□□ -1.96
GYPA-205ENST00000508337 SCXQ7RTU7 201 aa2.78□□□□□ -1.96
GYPA-205ENST00000508337 GPHB5Q86YW7 130 aa2.78□□□□□ -1.96
GYPA-205ENST00000508337 OR2T10Q8NGZ9 312 aa2.78□□□□□ -1.96
GYPA-205ENST00000508337 RTN4IP1Q8WWV3 396 aaPredicted RBP2.78□□□□□ -1.96
GYPA-205ENST00000508337 HIST1H2BAQ96A08 127 aa2.78□□□□□ -1.96
GYPA-205ENST00000508337 TEX37Q96LM6 180 aa2.78□□□□□ -1.96
GYPA-205ENST00000508337 TM2D3Q9BRN9 247 aa2.78□□□□□ -1.96
GYPA-205ENST00000508337 EFCAB1Q9HAE3 211 aa2.78□□□□□ -1.96
GYPA-205ENST00000508337 TP73-AS1Q9UF72 201 aa2.78□□□□□ -1.96
GYPA-205ENST00000508337 BAIAP2Q9UQB8 552 aa2.78□□□□□ -1.96
GYPA-205ENST00000508337 HS3ST2Q9Y278 367 aa2.78□□□□□ -1.96
GYPA-205ENST00000508337 ZFP30Q9Y2G7 519 aa2.78□□□□□ -1.96
GYPA-205ENST00000508337 SETD1AO15047 1707 aaKnown RBP2.78□□□□□ -1.96
GYPA-205ENST00000508337 C2orf16Q68DN1 1984 aa2.78□□□□□ -1.97
GYPA-205ENST00000508337 TECPR2O15040 1411 aa2.77□□□□□ -1.97
GYPA-205ENST00000508337 TAF1LQ8IZX4 1826 aa2.77□□□□□ -1.97
GYPA-205ENST00000508337 IGHV1OR15-9A0A0B4J2B8 117 aa2.77□□□□□ -1.97
GYPA-205ENST00000508337 IGKV1-6A0A0C4DH72 117 aa2.77□□□□□ -1.97
GYPA-205ENST00000508337 LOC100130705A0A1B0GUX0 176 aa2.77□□□□□ -1.97
GYPA-205ENST00000508337 LINC00862A6NCI5 91 aa2.77□□□□□ -1.97
GYPA-205ENST00000508337 J3QQQ9 107 aa2.77□□□□□ -1.97
GYPA-205ENST00000508337 TAX1BP3O14907 124 aa2.77□□□□□ -1.97
GYPA-205ENST00000508337 PGLYRP1O75594 196 aaPredicted RBP2.77□□□□□ -1.97
GYPA-205ENST00000508337 TRGC2P03986 189 aa2.77□□□□□ -1.97
GYPA-205ENST00000508337 IGKV4-1P06312 121 aa2.77□□□□□ -1.97
GYPA-205ENST00000508337 SRP19P09132 144 aaKnown RBP2.77□□□□□ -1.97
GYPA-205ENST00000508337 CXCL12P48061 93 aa2.77□□□□□ -1.97
GYPA-205ENST00000508337 ZNF80P51504 273 aaPredicted RBP2.77□□□□□ -1.97
GYPA-205ENST00000508337 RPL30P62888 115 aaKnown RBP2.77□□□□□ -1.97
GYPA-205ENST00000508337 MSMO1Q15800 293 aa2.77□□□□□ -1.97
GYPA-205ENST00000508337 VMA21Q3ZAQ7 101 aa2.77□□□□□ -1.97
GYPA-205ENST00000508337 TEX261Q6UWH6 196 aa2.77□□□□□ -1.97
GYPA-205ENST00000508337 CTAGE3PQ8IX95 158 aa2.77□□□□□ -1.97
GYPA-205ENST00000508337 C8orf59Q8N0T1 100 aaPredicted RBP2.77□□□□□ -1.97
GYPA-205ENST00000508337 OR11G2Q8NGC1 345 aa2.77□□□□□ -1.97
GYPA-205ENST00000508337 OR52R1Q8NGF1 315 aa2.77□□□□□ -1.97
GYPA-205ENST00000508337 OR4K13Q8NH42 304 aa2.77□□□□□ -1.97
GYPA-205ENST00000508337 PPTC7Q8NI37 304 aa2.77□□□□□ -1.97
GYPA-205ENST00000508337 STAG3L4Q8TBR4 150 aa2.77□□□□□ -1.97
GYPA-205ENST00000508337 H1FXQ92522 213 aaKnown RBP2.77□□□□□ -1.97
GYPA-205ENST00000508337 MAL2Q969L2 176 aa2.77□□□□□ -1.97
GYPA-205ENST00000508337 C2orf50Q96LR7 162 aa2.77□□□□□ -1.97
GYPA-205ENST00000508337 PSMG3Q9BT73 122 aaPredicted RBP2.77□□□□□ -1.97
GYPA-205ENST00000508337 MRPS16Q9Y3D3 137 aaKnown RBP2.77□□□□□ -1.97
GYPA-205ENST00000508337 CHD5Q8TDI0 1954 aa2.77□□□□□ -1.97
GYPA-205ENST00000508337 DENND4BO75064 1496 aaPredicted RBP2.77□□□□□ -1.97
GYPA-205ENST00000508337 KIF26AQ9ULI4 1882 aaPredicted RBP2.76□□□□□ -1.97
GYPA-205ENST00000508337 IGKV1D-43A0A0B4J1Z2 117 aa2.76□□□□□ -1.97
GYPA-205ENST00000508337 TRAV38-1A0A0B4J264 116 aa2.76□□□□□ -1.97
GYPA-205ENST00000508337 TMEM218A2RU14 115 aa2.76□□□□□ -1.97
GYPA-205ENST00000508337 CCL25O15444 150 aa2.76□□□□□ -1.97
GYPA-205ENST00000508337 ZNF73O43830 326 aaPredicted RBP2.76□□□□□ -1.97
GYPA-205ENST00000508337 NAPSAO96009 420 aa2.76□□□□□ -1.97
GYPA-205ENST00000508337 MAS1P04201 325 aa2.76□□□□□ -1.97
GYPA-205ENST00000508337 GPX1P07203 203 aa2.76□□□□□ -1.97
GYPA-205ENST00000508337 AKAIN1P0CW23 69 aa2.76□□□□□ -1.97
GYPA-205ENST00000508337 FABP2P12104 132 aa2.76□□□□□ -1.97
GYPA-205ENST00000508337 SDC2P34741 201 aa2.76□□□□□ -1.97
GYPA-205ENST00000508337 NDUFA6P56556 154 aa2.76□□□□□ -1.97
GYPA-205ENST00000508337 HES1Q14469 280 aa2.76□□□□□ -1.97
GYPA-205ENST00000508337 LDLRAD2Q5SZI1 272 aa2.76□□□□□ -1.97
GYPA-205ENST00000508337 Q5XG85 94 aa2.76□□□□□ -1.97
GYPA-205ENST00000508337 LCA10Q71F78 164 aa2.76□□□□□ -1.97
GYPA-205ENST00000508337 KTN1-AS1Q86SY8 53 aa2.76□□□□□ -1.97
GYPA-205ENST00000508337 LHFPL1Q86WI0 220 aa2.76□□□□□ -1.97
GYPA-205ENST00000508337 IFT20Q8IY31 132 aa2.76□□□□□ -1.97
GYPA-205ENST00000508337 ORMDL3Q8N138 153 aa2.76□□□□□ -1.97
GYPA-205ENST00000508337 TEX29Q8N6K0 151 aa2.76□□□□□ -1.97
GYPA-205ENST00000508337 DAND5Q8N907 189 aa2.76□□□□□ -1.97
GYPA-205ENST00000508337 DCANP1Q8TF63 244 aa2.76□□□□□ -1.97
GYPA-205ENST00000508337 C15orf40Q8WUR7 153 aa2.76□□□□□ -1.97
GYPA-205ENST00000508337 BRK1Q8WUW1 75 aa2.76□□□□□ -1.97
GYPA-205ENST00000508337 ZNF471Q9BX82 626 aaPredicted RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms