RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 CD300EQ496F6 205 aaPredicted RBP15.06■□□□□ 0
SFXN1-209ENST00000508290 TMEM268Q5VZI3 342 aa15.06■□□□□ 0
SFXN1-209ENST00000508290 Q8N1Y9 231 aa15.06■□□□□ 0
SFXN1-209ENST00000508290 TMEM190Q8WZ59 177 aa15.06■□□□□ 0
SFXN1-209ENST00000508290 OR2T8A6NH00 312 aa15.05■□□□□ -0
SFXN1-209ENST00000508290 NUPL2O15504 423 aaKnown RBP15.05■□□□□ -0
SFXN1-209ENST00000508290 HOXA1P49639 335 aaPredicted RBP15.05■□□□□ -0
SFXN1-209ENST00000508290 IZUMO4Q1ZYL8 232 aa15.05■□□□□ -0
SFXN1-209ENST00000508290 Q56UQ5 140 aa15.05■□□□□ -0
SFXN1-209ENST00000508290 ADAMTSL5Q6ZMM2 481 aa15.05■□□□□ -0
SFXN1-209ENST00000508290 SELENOHQ8IZQ5 122 aaKnown RBP15.05■□□□□ -0
SFXN1-209ENST00000508290 MISP3Q96FF7 219 aa15.05■□□□□ -0
SFXN1-209ENST00000508290 DAZ1Q9NQZ3 744 aaKnown RBP15.05■□□□□ -0
SFXN1-209ENST00000508290 TRAV25A0A0B4J276 109 aa15.04■□□□□ -0
SFXN1-209ENST00000508290 I3L2K1 104 aa15.04■□□□□ -0
SFXN1-209ENST00000508290 FRMD6-AS1P0C7T7 363 aa15.04■□□□□ -0
SFXN1-209ENST00000508290 C8orf88P0DMB2 117 aa15.04■□□□□ -0
SFXN1-209ENST00000508290 ZNF57Q68EA5 555 aaPredicted RBP15.04■□□□□ -0
SFXN1-209ENST00000508290 PVRIGQ6DKI7 326 aa15.04■□□□□ -0
SFXN1-209ENST00000508290 A0A0B4J2A0 478 aa15.03■□□□□ -0
SFXN1-209ENST00000508290 A0A0G2JRQ6 117 aa15.03■□□□□ -0
SFXN1-209ENST00000508290 K7EMT4 169 aa15.03■□□□□ -0
SFXN1-209ENST00000508290 SCGB2A1O75556 95 aa15.03■□□□□ -0
SFXN1-209ENST00000508290 MT-CO2P00403 227 aa15.03■□□□□ -0
SFXN1-209ENST00000508290 IGHV4-30-4P0DP06 118 aa15.03■□□□□ -0
SFXN1-209ENST00000508290 NPBWR1P48145 328 aa15.03■□□□□ -0
SFXN1-209ENST00000508290 INPP1P49441 399 aa15.03■□□□□ -0
SFXN1-209ENST00000508290 ANKRD55Q3KP44 614 aa15.03■□□□□ -0
SFXN1-209ENST00000508290 TMEM128Q5BJH2 165 aa15.03■□□□□ -0
SFXN1-209ENST00000508290 UNQ9165/PRO28630Q6UXU0 137 aa15.03■□□□□ -0
SFXN1-209ENST00000508290 UBAC2Q8NBM4 344 aa15.03■□□□□ -0
SFXN1-209ENST00000508290 UXS1Q8NBZ7 420 aa15.03■□□□□ -0
SFXN1-209ENST00000508290 LHFPL5Q8TAF8 219 aa15.03■□□□□ -0
SFXN1-209ENST00000508290 TMEM230Q96A57 120 aa15.03■□□□□ -0
SFXN1-209ENST00000508290 SHPKQ9UHJ6 478 aa15.03■□□□□ -0
SFXN1-209ENST00000508290 U3KQK5 164 aa15.03■□□□□ -0
SFXN1-209ENST00000508290 DUXBA0A1W2PPF3 345 aa15.02■□□□□ -0
SFXN1-209ENST00000508290 C15orf62A8K5M9 175 aa15.02■□□□□ -0
SFXN1-209ENST00000508290 F8W735 103 aaPredicted RBP15.02■□□□□ -0
SFXN1-209ENST00000508290 AKR1C4P17516 323 aa15.02■□□□□ -0
SFXN1-209ENST00000508290 HTR2BP41595 481 aa15.02■□□□□ -0
SFXN1-209ENST00000508290 TMEM187Q14656 261 aa15.02■□□□□ -0
SFXN1-209ENST00000508290 C11orf87Q6NUJ2 197 aa15.02■□□□□ -0
SFXN1-209ENST00000508290 NOXA1Q86UR1 476 aa15.02■□□□□ -0
SFXN1-209ENST00000508290 LGI3Q8N145 548 aa15.02■□□□□ -0
SFXN1-209ENST00000508290 DUSP18Q8NEJ0 188 aa15.02■□□□□ -0
SFXN1-209ENST00000508290 SRRQ9GZT4 340 aa15.02■□□□□ -0
SFXN1-209ENST00000508290 C19orf73Q9NVV2 129 aa15.02■□□□□ -0
SFXN1-209ENST00000508290 CACNG5Q9UF02 275 aa15.02■□□□□ -0
SFXN1-209ENST00000508290 IZUMO1RA6ND01 250 aa15.01□□□□□ -0.01
SFXN1-209ENST00000508290 NAP1L6A6NFF2 107 aa15.01□□□□□ -0.01
SFXN1-209ENST00000508290 GNG7O60262 68 aa15.01□□□□□ -0.01
SFXN1-209ENST00000508290 CTSGP08311 255 aa15.01□□□□□ -0.01
SFXN1-209ENST00000508290 SULT1A3P0DMM9 295 aa15.01□□□□□ -0.01
SFXN1-209ENST00000508290 SULT1A4P0DMN0 295 aa15.01□□□□□ -0.01
SFXN1-209ENST00000508290 BSXQ3C1V8 233 aa15.01□□□□□ -0.01
SFXN1-209ENST00000508290 TRIQKQ629K1 86 aa15.01□□□□□ -0.01
SFXN1-209ENST00000508290 Q6ZRM9 215 aa15.01□□□□□ -0.01
SFXN1-209ENST00000508290 SLC16A13Q7RTY0 426 aa15.01□□□□□ -0.01
SFXN1-209ENST00000508290 PINX1Q96BK5 328 aaKnown RBP15.01□□□□□ -0.01
SFXN1-209ENST00000508290 WWC2-AS2Q96NR7 200 aa15.01□□□□□ -0.01
SFXN1-209ENST00000508290 ZMAT4Q9H898 229 aa15.01□□□□□ -0.01
SFXN1-209ENST00000508290 COL7A1Q02388 2944 aa15□□□□□ -0.01
SFXN1-209ENST00000508290 IGHV3-21A0A0B4J1V1 117 aa15□□□□□ -0.01
SFXN1-209ENST00000508290 ZNF785A8K8V0 405 aa15□□□□□ -0.01
SFXN1-209ENST00000508290 RNASE2P10153 161 aaKnown RBP15□□□□□ -0.01
SFXN1-209ENST00000508290 ADMP35318 185 aa15□□□□□ -0.01
SFXN1-209ENST00000508290 CCR6P51684 374 aa15□□□□□ -0.01
SFXN1-209ENST00000508290 CD81P60033 236 aa15□□□□□ -0.01
SFXN1-209ENST00000508290 SUPT4H1P63272 117 aaKnown RBP15□□□□□ -0.01
SFXN1-209ENST00000508290 RBMS2Q15434 407 aaKnown RBP15□□□□□ -0.01
SFXN1-209ENST00000508290 TM4SF20Q53R12 229 aa15□□□□□ -0.01
SFXN1-209ENST00000508290 SPINK9Q5DT21 86 aa15□□□□□ -0.01
SFXN1-209ENST00000508290 GPR146Q96CH1 333 aa15□□□□□ -0.01
SFXN1-209ENST00000508290 CHRDL1Q9BU40 450 aa15□□□□□ -0.01
SFXN1-209ENST00000508290 TUBA4BQ9H853 241 aa15□□□□□ -0.01
SFXN1-209ENST00000508290 RPS10-NUDT3A0A1W2PQS6 291 aa14.99□□□□□ -0.01
SFXN1-209ENST00000508290 UBE2MP61081 183 aaKnown RBP14.99□□□□□ -0.01
SFXN1-209ENST00000508290 GUCA2BQ16661 112 aa14.99□□□□□ -0.01
SFXN1-209ENST00000508290 LAMTOR1Q6IAA8 161 aa14.99□□□□□ -0.01
SFXN1-209ENST00000508290 RBPMS2Q6ZRY4 209 aaKnown RBP14.99□□□□□ -0.01
SFXN1-209ENST00000508290 TMED4Q7Z7H5 227 aa14.99□□□□□ -0.01
SFXN1-209ENST00000508290 TMEM61Q8N0U2 210 aa14.99□□□□□ -0.01
SFXN1-209ENST00000508290 CACNG8Q8WXS5 425 aa14.99□□□□□ -0.01
SFXN1-209ENST00000508290 ASCL2Q99929 193 aa14.99□□□□□ -0.01
SFXN1-209ENST00000508290 NEURL2Q9BR09 285 aa14.99□□□□□ -0.01
SFXN1-209ENST00000508290 HIPK2Q9H2X6 1198 aa14.99□□□□□ -0.01
SFXN1-209ENST00000508290 HEYLQ9NQ87 328 aaPredicted RBP14.99□□□□□ -0.01
SFXN1-209ENST00000508290 MLXQ9UH92 298 aa14.99□□□□□ -0.01
SFXN1-209ENST00000508290 IGHV3-35A0A0C4DH35 117 aa14.98□□□□□ -0.01
SFXN1-209ENST00000508290 CENPXA8MT69 81 aa14.98□□□□□ -0.01
SFXN1-209ENST00000508290 BMI1P35226 326 aa14.98□□□□□ -0.01
SFXN1-209ENST00000508290 ATP5IP56385 69 aaPredicted RBP14.98□□□□□ -0.01
SFXN1-209ENST00000508290 SMCO1Q147U7 214 aa14.98□□□□□ -0.01
SFXN1-209ENST00000508290 NMSQ5H8A3 153 aa14.98□□□□□ -0.01
SFXN1-209ENST00000508290 BTNL8Q6UX41 500 aa14.98□□□□□ -0.01
SFXN1-209ENST00000508290 SBSPONQ8IVN8 264 aa14.98□□□□□ -0.01
SFXN1-209ENST00000508290 LRTM2Q8N967 370 aa14.98□□□□□ -0.01
SFXN1-209ENST00000508290 RNASEH2CQ8TDP1 164 aaKnown RBP14.98□□□□□ -0.01
SFXN1-209ENST00000508290 C7orf50Q9BRJ6 194 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms