RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 DUXBA0A1W2PPF3 345 aa5.58□□□□□ -1.52
GYPB-206ENST00000506516 INS-IGF2F8WCM5 200 aa5.58□□□□□ -1.52
GYPB-206ENST00000506516 ST8SIA3O43173 380 aa5.58□□□□□ -1.52
GYPB-206ENST00000506516 GGCTO75223 188 aaKnown RBP5.58□□□□□ -1.52
GYPB-206ENST00000506516 SFT2D2O95562 160 aa5.58□□□□□ -1.52
GYPB-206ENST00000506516 CLEC3BP05452 202 aa5.58□□□□□ -1.52
GYPB-206ENST00000506516 SULT1A3P0DMM9 295 aa5.58□□□□□ -1.52
GYPB-206ENST00000506516 SULT1A4P0DMN0 295 aa5.58□□□□□ -1.52
GYPB-206ENST00000506516 HOXD3P31249 432 aaPredicted RBP5.58□□□□□ -1.52
GYPB-206ENST00000506516 SPCS3P61009 180 aa5.58□□□□□ -1.52
GYPB-206ENST00000506516 SUPT4H1P63272 117 aaKnown RBP5.58□□□□□ -1.52
GYPB-206ENST00000506516 DEFA5Q01523 94 aa5.58□□□□□ -1.52
GYPB-206ENST00000506516 KLF5Q13887 457 aaPredicted RBP5.58□□□□□ -1.52
GYPB-206ENST00000506516 IZUMO4Q1ZYL8 232 aa5.58□□□□□ -1.52
GYPB-206ENST00000506516 MZT2BQ6NZ67 158 aa5.58□□□□□ -1.52
GYPB-206ENST00000506516 Q6ZRM9 215 aa5.58□□□□□ -1.52
GYPB-206ENST00000506516 C19orf35Q6ZS72 473 aa5.58□□□□□ -1.52
GYPB-206ENST00000506516 LYZL2Q7Z4W2 148 aa5.58□□□□□ -1.52
GYPB-206ENST00000506516 OR2C3Q8N628 320 aa5.58□□□□□ -1.52
GYPB-206ENST00000506516 SLC35G3Q8N808 338 aa5.58□□□□□ -1.52
GYPB-206ENST00000506516 OR1P1Q8NH06 330 aa5.58□□□□□ -1.52
GYPB-206ENST00000506516 OR52E5Q8NH55 327 aa5.58□□□□□ -1.52
GYPB-206ENST00000506516 LHFPL5Q8TAF8 219 aa5.58□□□□□ -1.52
GYPB-206ENST00000506516 VN1R17PQ8TDU5 208 aa5.58□□□□□ -1.52
GYPB-206ENST00000506516 GPR146Q96CH1 333 aa5.58□□□□□ -1.52
GYPB-206ENST00000506516 KRTAP4-12Q9BQ66 201 aa5.58□□□□□ -1.52
GYPB-206ENST00000506516 WDR12Q9GZL7 423 aaKnown RBP5.58□□□□□ -1.52
GYPB-206ENST00000506516 GAR1Q9NY12 217 aaKnown RBP5.58□□□□□ -1.52
GYPB-206ENST00000506516 PEMTQ9UBM1 199 aa5.58□□□□□ -1.52
GYPB-206ENST00000506516 CACNG5Q9UF02 275 aa5.58□□□□□ -1.52
GYPB-206ENST00000506516 SHPKQ9UHJ6 478 aa5.58□□□□□ -1.52
GYPB-206ENST00000506516 NBEAL1Q6ZS30 2694 aa5.57□□□□□ -1.52
GYPB-206ENST00000506516 A0A1B0GU03 582 aa5.57□□□□□ -1.52
GYPB-206ENST00000506516 CORTO00230 105 aa5.57□□□□□ -1.52
GYPB-206ENST00000506516 LYRM1O43325 122 aa5.57□□□□□ -1.52
GYPB-206ENST00000506516 SAP30O75446 220 aa5.57□□□□□ -1.52
GYPB-206ENST00000506516 IGHV3-23P01764 117 aa5.57□□□□□ -1.52
GYPB-206ENST00000506516 ARL3P36405 182 aa5.57□□□□□ -1.52
GYPB-206ENST00000506516 HOXA1P49639 335 aaPredicted RBP5.57□□□□□ -1.52
GYPB-206ENST00000506516 SYNJ2BPP57105 145 aa5.57□□□□□ -1.52
GYPB-206ENST00000506516 EGFEM1PQ0D2K5 195 aa5.57□□□□□ -1.52
GYPB-206ENST00000506516 SMCO1Q147U7 214 aa5.57□□□□□ -1.52
GYPB-206ENST00000506516 FAM106AQ4KMX7 169 aa5.57□□□□□ -1.52
GYPB-206ENST00000506516 ACSM6Q6P461 480 aa5.57□□□□□ -1.52
GYPB-206ENST00000506516 CLEC19AQ6UXS0 136 aa5.57□□□□□ -1.52
GYPB-206ENST00000506516 GPHB5Q86YW7 130 aa5.57□□□□□ -1.52
GYPB-206ENST00000506516 LRTM2Q8N967 370 aa5.57□□□□□ -1.52
GYPB-206ENST00000506516 ZNF114Q8NC26 417 aa5.57□□□□□ -1.52
GYPB-206ENST00000506516 OR9G4Q8NGQ1 327 aa5.57□□□□□ -1.52
GYPB-206ENST00000506516 COQ8AQ8NI60 647 aa5.57□□□□□ -1.52
GYPB-206ENST00000506516 SCARB1Q8WTV0 552 aa5.57□□□□□ -1.52
GYPB-206ENST00000506516 ATP6V0BQ99437 205 aa5.57□□□□□ -1.52
GYPB-206ENST00000506516 HIPK2Q9H2X6 1198 aa5.57□□□□□ -1.52
GYPB-206ENST00000506516 HEYLQ9NQ87 328 aaPredicted RBP5.57□□□□□ -1.52
GYPB-206ENST00000506516 C21orf62Q9NYP8 219 aa5.57□□□□□ -1.52
GYPB-206ENST00000506516 TMED3Q9Y3Q3 217 aa5.57□□□□□ -1.52
GYPB-206ENST00000506516 A0A0G2JRQ6 117 aa5.56□□□□□ -1.52
GYPB-206ENST00000506516 FAM240BA0A1B0GVZ2 78 aa5.56□□□□□ -1.52
GYPB-206ENST00000506516 ZNF320A2RRD8 509 aa5.56□□□□□ -1.52
GYPB-206ENST00000506516 MFSD2BA6NFX1 497 aa5.56□□□□□ -1.52
GYPB-206ENST00000506516 CEBPZOSA8MTT3 80 aa5.56□□□□□ -1.52
GYPB-206ENST00000506516 PPP5D1E7EU14 171 aa5.56□□□□□ -1.52
GYPB-206ENST00000506516 BMPR1BO00238 502 aa5.56□□□□□ -1.52
GYPB-206ENST00000506516 PLA2G10O15496 165 aa5.56□□□□□ -1.52
GYPB-206ENST00000506516 OR2C1O95371 312 aa5.56□□□□□ -1.52
GYPB-206ENST00000506516 IFNA21P01568 189 aa5.56□□□□□ -1.52
GYPB-206ENST00000506516 TRBV12-3P01733 135 aa5.56□□□□□ -1.52
GYPB-206ENST00000506516 HLA-AP01891 365 aaKnown RBP5.56□□□□□ -1.52
GYPB-206ENST00000506516 OR4E1P0C645 316 aa5.56□□□□□ -1.52
GYPB-206ENST00000506516 HTR2BP41595 481 aa5.56□□□□□ -1.52
GYPB-206ENST00000506516 MFAP4P55083 255 aa5.56□□□□□ -1.52
GYPB-206ENST00000506516 KRTAP10-11P60412 298 aa5.56□□□□□ -1.52
GYPB-206ENST00000506516 PPP1R1AQ13522 171 aa5.56□□□□□ -1.52
GYPB-206ENST00000506516 AARDQ4LEZ3 155 aa5.56□□□□□ -1.52
GYPB-206ENST00000506516 C4orf46Q504U0 113 aa5.56□□□□□ -1.52
GYPB-206ENST00000506516 PDLIM3Q53GG5 364 aaPredicted RBP5.56□□□□□ -1.52
GYPB-206ENST00000506516 SPINK9Q5DT21 86 aa5.56□□□□□ -1.52
GYPB-206ENST00000506516 SPSB3Q6PJ21 355 aa5.56□□□□□ -1.52
GYPB-206ENST00000506516 PLET1Q6UQ28 207 aa5.56□□□□□ -1.52
GYPB-206ENST00000506516 NOXA1Q86UR1 476 aa5.56□□□□□ -1.52
GYPB-206ENST00000506516 UBAC2Q8NBM4 344 aa5.56□□□□□ -1.52
GYPB-206ENST00000506516 OR1S1Q8NH92 325 aa5.56□□□□□ -1.52
GYPB-206ENST00000506516 ZNF502Q8TBZ5 544 aa5.56□□□□□ -1.52
GYPB-206ENST00000506516 PINX1Q96BK5 328 aaKnown RBP5.56□□□□□ -1.52
GYPB-206ENST00000506516 BSCL2Q96G97 398 aaPredicted RBP5.56□□□□□ -1.52
GYPB-206ENST00000506516 TXN2Q99757 166 aa5.56□□□□□ -1.52
GYPB-206ENST00000506516 PALMDQ9NP74 551 aa5.56□□□□□ -1.52
GYPB-206ENST00000506516 AURKAIP1Q9NWT8 199 aaPredicted RBP5.56□□□□□ -1.52
GYPB-206ENST00000506516 DMRT1Q9Y5R6 373 aa5.56□□□□□ -1.52
GYPB-206ENST00000506516 S4R3C0 116 aa5.56□□□□□ -1.52
GYPB-206ENST00000506516 PLXNB1O43157 2135 aa5.56□□□□□ -1.52
GYPB-206ENST00000506516 MGAM2Q2M2H8 2515 aa5.55□□□□□ -1.52
GYPB-206ENST00000506516 MEGF8Q7Z7M0 2845 aa5.55□□□□□ -1.52
GYPB-206ENST00000506516 IGHV3-21A0A0B4J1V1 117 aa5.55□□□□□ -1.52
GYPB-206ENST00000506516 C9orf170A2RU37 121 aa5.55□□□□□ -1.52
GYPB-206ENST00000506516 OR2T8A6NH00 312 aa5.55□□□□□ -1.52
GYPB-206ENST00000506516 LGALS9O00182 355 aa5.55□□□□□ -1.52
GYPB-206ENST00000506516 PAX4O43316 350 aa5.55□□□□□ -1.52
GYPB-206ENST00000506516 TGOLN2O43493 480 aa5.55□□□□□ -1.52
GYPB-206ENST00000506516 MED6O75586 246 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms