RNA–Protein interactions for RNA: ENST00000506089.1

SMARCAD1-205, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 4

Gene SMARCAD1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-205ENST00000506089 HLA-DMBP28068 263 aa2.29□□□□□ -2.04
SMARCAD1-205ENST00000506089 YPEL3P61236 119 aaPredicted RBP2.29□□□□□ -2.04
SMARCAD1-205ENST00000506089 MOBPQ13875 183 aa2.29□□□□□ -2.04
SMARCAD1-205ENST00000506089 ZNF141Q15928 474 aa2.29□□□□□ -2.04
SMARCAD1-205ENST00000506089 FAM229BQ4G0N7 80 aa2.29□□□□□ -2.04
SMARCAD1-205ENST00000506089 ZNF705AQ6ZN79 300 aaPredicted RBP2.29□□□□□ -2.04
SMARCAD1-205ENST00000506089 TRAPPC6BQ86SZ2 158 aa2.29□□□□□ -2.04
SMARCAD1-205ENST00000506089 CLVS1Q8IUQ0 354 aaPredicted RBP2.29□□□□□ -2.04
SMARCAD1-205ENST00000506089 GRPEL2Q8TAA5 225 aa2.29□□□□□ -2.04
SMARCAD1-205ENST00000506089 ZNF2Q9BSG1 426 aaPredicted RBP2.29□□□□□ -2.04
SMARCAD1-205ENST00000506089 C6orf62Q9GZU0 229 aaPredicted RBP2.29□□□□□ -2.04
SMARCAD1-205ENST00000506089 LAMTOR3Q9UHA4 124 aa2.29□□□□□ -2.04
SMARCAD1-205ENST00000506089 AMMECR1Q9Y4X0 333 aaPredicted RBP2.29□□□□□ -2.04
SMARCAD1-205ENST00000506089 PRR14LQ5THK1 2151 aa2.29□□□□□ -2.04
SMARCAD1-205ENST00000506089 ECM29Q5VYK3 1845 aa2.28□□□□□ -2.04
SMARCAD1-205ENST00000506089 TRAV41A0A0B4J266 112 aa2.28□□□□□ -2.04
SMARCAD1-205ENST00000506089 DUXBA0A1W2PPF3 345 aa2.28□□□□□ -2.04
SMARCAD1-205ENST00000506089 A0A1W2PQD3 144 aa2.28□□□□□ -2.04
SMARCAD1-205ENST00000506089 A0A1W2PRE2 83 aa2.28□□□□□ -2.04
SMARCAD1-205ENST00000506089 ZNF73O43830 326 aaPredicted RBP2.28□□□□□ -2.04
SMARCAD1-205ENST00000506089 CREBL2O60519 120 aaPredicted RBP2.28□□□□□ -2.04
SMARCAD1-205ENST00000506089 IGHV3-7P01780 117 aa2.28□□□□□ -2.04
SMARCAD1-205ENST00000506089 MSMBP08118 114 aa2.28□□□□□ -2.04
SMARCAD1-205ENST00000506089 ALDH3A1P30838 453 aa2.28□□□□□ -2.04
SMARCAD1-205ENST00000506089 PSMD8P48556 350 aa2.28□□□□□ -2.04
SMARCAD1-205ENST00000506089 EMP1P54849 157 aa2.28□□□□□ -2.04
SMARCAD1-205ENST00000506089 TPI1P60174 286 aa2.28□□□□□ -2.04
SMARCAD1-205ENST00000506089 CDC42P60953 191 aa2.28□□□□□ -2.04
SMARCAD1-205ENST00000506089 SMCO1Q147U7 214 aa2.28□□□□□ -2.04
SMARCAD1-205ENST00000506089 ZNF767PQ75MW2 155 aa2.28□□□□□ -2.04
SMARCAD1-205ENST00000506089 KTN1-AS1Q86SY8 53 aa2.28□□□□□ -2.04
SMARCAD1-205ENST00000506089 MBD3L1Q8WWY6 194 aa2.28□□□□□ -2.04
SMARCAD1-205ENST00000506089 DEDD2Q8WXF8 326 aa2.28□□□□□ -2.04
SMARCAD1-205ENST00000506089 TM2D3Q9BRN9 247 aa2.28□□□□□ -2.04
SMARCAD1-205ENST00000506089 CCDC32Q9BV29 185 aa2.28□□□□□ -2.04
SMARCAD1-205ENST00000506089 TUBA4BQ9H853 241 aa2.28□□□□□ -2.04
SMARCAD1-205ENST00000506089 LRTM1Q9HBL6 345 aa2.28□□□□□ -2.04
SMARCAD1-205ENST00000506089 ERGIC3Q9Y282 383 aa2.28□□□□□ -2.04
SMARCAD1-205ENST00000506089 TIMM22Q9Y584 194 aa2.28□□□□□ -2.04
SMARCAD1-205ENST00000506089 FAM215AQ9Y5M1 114 aa2.28□□□□□ -2.04
SMARCAD1-205ENST00000506089 R4GN34 69 aa2.28□□□□□ -2.04
SMARCAD1-205ENST00000506089 ZNF106Q9H2Y7 1883 aaKnown RBP2.28□□□□□ -2.04
SMARCAD1-205ENST00000506089 TRGV5A0A0B4J1U4 118 aa2.27□□□□□ -2.05
SMARCAD1-205ENST00000506089 TRAPPC2LH3BP13 241 aa2.27□□□□□ -2.05
SMARCAD1-205ENST00000506089 BUB1B-PAK6H3BSN5 160 aa2.27□□□□□ -2.05
SMARCAD1-205ENST00000506089 CYB5BO43169 146 aa2.27□□□□□ -2.05
SMARCAD1-205ENST00000506089 HMGN1P05114 100 aa2.27□□□□□ -2.05
SMARCAD1-205ENST00000506089 CSN2P05814 226 aa2.27□□□□□ -2.05
SMARCAD1-205ENST00000506089 ZNF14P17017 642 aaPredicted RBP2.27□□□□□ -2.05
SMARCAD1-205ENST00000506089 PSMB8P28062 276 aa2.27□□□□□ -2.05
SMARCAD1-205ENST00000506089 ZNF80P51504 273 aaPredicted RBP2.27□□□□□ -2.05
SMARCAD1-205ENST00000506089 LINC00315P59091 139 aa2.27□□□□□ -2.05
SMARCAD1-205ENST00000506089 SURF2Q15527 256 aaPredicted RBP2.27□□□□□ -2.05
SMARCAD1-205ENST00000506089 EXOC3-AS1Q8N2X6 119 aa2.27□□□□□ -2.05
SMARCAD1-205ENST00000506089 OR10J5Q8NHC4 309 aa2.27□□□□□ -2.05
SMARCAD1-205ENST00000506089 CMTM2Q8TAZ6 248 aa2.27□□□□□ -2.05
SMARCAD1-205ENST00000506089 FGF13Q92913 245 aa2.27□□□□□ -2.05
SMARCAD1-205ENST00000506089 RMND5BQ96G75 393 aaPredicted RBP2.27□□□□□ -2.05
SMARCAD1-205ENST00000506089 EFCAB11Q9BUY7 163 aa2.27□□□□□ -2.05
SMARCAD1-205ENST00000506089 OR2J1Q9GZK6 312 aa2.27□□□□□ -2.05
SMARCAD1-205ENST00000506089 SPANXCQ9NY87 97 aa2.27□□□□□ -2.05
SMARCAD1-205ENST00000506089 ADGBQ8N7X0 1667 aa2.27□□□□□ -2.05
SMARCAD1-205ENST00000506089 MYH11P35749 1972 aa2.27□□□□□ -2.05
SMARCAD1-205ENST00000506089 TOPBP1Q92547 1522 aa2.27□□□□□ -2.05
SMARCAD1-205ENST00000506089 PTPRSQ13332 1948 aa2.27□□□□□ -2.05
SMARCAD1-205ENST00000506089 KIF26AQ9ULI4 1882 aaPredicted RBP2.26□□□□□ -2.05
SMARCAD1-205ENST00000506089 MDFIC2A0A1B0GVS7 189 aa2.26□□□□□ -2.05
SMARCAD1-205ENST00000506089 KPNA4O00629 521 aaPredicted RBP2.26□□□□□ -2.05
SMARCAD1-205ENST00000506089 FAM107AO95990 144 aa2.26□□□□□ -2.05
SMARCAD1-205ENST00000506089 DHFRP00374 187 aa2.26□□□□□ -2.05
SMARCAD1-205ENST00000506089 IGKV3-11P04433 115 aa2.26□□□□□ -2.05
SMARCAD1-205ENST00000506089 ZNF728P0DKX0 622 aa2.26□□□□□ -2.05
SMARCAD1-205ENST00000506089 CCL5P13501 91 aa2.26□□□□□ -2.05
SMARCAD1-205ENST00000506089 NFYAP23511 347 aaPredicted RBP2.26□□□□□ -2.05
SMARCAD1-205ENST00000506089 GTF2A1P52655 376 aaPredicted RBP2.26□□□□□ -2.05
SMARCAD1-205ENST00000506089 RRN3P1Q2M238 152 aa2.26□□□□□ -2.05
SMARCAD1-205ENST00000506089 MIR17HGQ75NE6 70 aa2.26□□□□□ -2.05
SMARCAD1-205ENST00000506089 CROCCP2Q86T23 111 aa2.26□□□□□ -2.05
SMARCAD1-205ENST00000506089 LHFPL1Q86WI0 220 aa2.26□□□□□ -2.05
SMARCAD1-205ENST00000506089 DYNAPQ8N1N2 210 aa2.26□□□□□ -2.05
SMARCAD1-205ENST00000506089 ZNF561Q8N587 486 aa2.26□□□□□ -2.05
SMARCAD1-205ENST00000506089 OR5C1Q8NGR4 320 aa2.26□□□□□ -2.05
SMARCAD1-205ENST00000506089 TERB2Q8NHR7 220 aa2.26□□□□□ -2.05
SMARCAD1-205ENST00000506089 DNAJC9Q8WXX5 260 aa2.26□□□□□ -2.05
SMARCAD1-205ENST00000506089 SCGB3A1Q96QR1 104 aa2.26□□□□□ -2.05
SMARCAD1-205ENST00000506089 RSPO3Q9BXY4 272 aaPredicted RBP2.26□□□□□ -2.05
SMARCAD1-205ENST00000506089 OR8D2Q9GZM6 311 aa2.26□□□□□ -2.05
SMARCAD1-205ENST00000506089 MRPL16Q9NX20 251 aaKnown RBP2.26□□□□□ -2.05
SMARCAD1-205ENST00000506089 MED11Q9P086 117 aa2.26□□□□□ -2.05
SMARCAD1-205ENST00000506089 CKLFQ9UBR5 152 aa2.26□□□□□ -2.05
SMARCAD1-205ENST00000506089 RBM7Q9Y580 266 aaKnown RBP2.26□□□□□ -2.05
SMARCAD1-205ENST00000506089 VIRMAQ69YN4 1812 aaKnown RBP2.26□□□□□ -2.05
SMARCAD1-205ENST00000506089 ZNF407Q9C0G0 2248 aa2.25□□□□□ -2.05
SMARCAD1-205ENST00000506089 A0A087X0T9 212 aa2.25□□□□□ -2.05
SMARCAD1-205ENST00000506089 ARL5CA6NH57 179 aa2.25□□□□□ -2.05
SMARCAD1-205ENST00000506089 SLC22A1O15245 554 aa2.25□□□□□ -2.05
SMARCAD1-205ENST00000506089 GNRH2O43555 120 aa2.25□□□□□ -2.05
SMARCAD1-205ENST00000506089 GGCTO75223 188 aaKnown RBP2.25□□□□□ -2.05
SMARCAD1-205ENST00000506089 HRES1P13985 223 aa2.25□□□□□ -2.05
SMARCAD1-205ENST00000506089 OGNP20774 298 aaKnown RBP2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms