RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 A0A0J9YWU9 116 aa14.78□□□□□ -0.04
UBE2D3-220ENST00000505307 FAM25AB3EWG3 89 aa14.78□□□□□ -0.04
UBE2D3-220ENST00000505307 FAM25CB3EWG5 89 aa14.78□□□□□ -0.04
UBE2D3-220ENST00000505307 FAM25GB3EWG6 89 aa14.78□□□□□ -0.04
UBE2D3-220ENST00000505307 INS-IGF2F8WCM5 200 aa14.78□□□□□ -0.04
UBE2D3-220ENST00000505307 M0QYG6 137 aa14.78□□□□□ -0.04
UBE2D3-220ENST00000505307 GNG7O60262 68 aa14.78□□□□□ -0.04
UBE2D3-220ENST00000505307 PGAM2P15259 253 aa14.78□□□□□ -0.04
UBE2D3-220ENST00000505307 NPBWR1P48145 328 aa14.78□□□□□ -0.04
UBE2D3-220ENST00000505307 MAP6D1Q9H9H5 199 aa14.78□□□□□ -0.04
UBE2D3-220ENST00000505307 CXorf65A6NEN9 183 aa14.77□□□□□ -0.05
UBE2D3-220ENST00000505307 SNCAP37840 140 aa14.77□□□□□ -0.05
UBE2D3-220ENST00000505307 PAFAH1B2P68402 229 aa14.77□□□□□ -0.05
UBE2D3-220ENST00000505307 LHFPL1Q86WI0 220 aa14.77□□□□□ -0.05
UBE2D3-220ENST00000505307 DUSP18Q8NEJ0 188 aa14.77□□□□□ -0.05
UBE2D3-220ENST00000505307 PINX1Q96BK5 328 aaKnown RBP14.77□□□□□ -0.05
UBE2D3-220ENST00000505307 ZNF414Q96IQ9 312 aa14.77□□□□□ -0.05
UBE2D3-220ENST00000505307 CORTO00230 105 aa14.76□□□□□ -0.05
UBE2D3-220ENST00000505307 B3GALNT1O75752 331 aa14.76□□□□□ -0.05
UBE2D3-220ENST00000505307 ZNF182P17025 639 aaPredicted RBP14.76□□□□□ -0.05
UBE2D3-220ENST00000505307 AKR1C2P52895 323 aa14.76□□□□□ -0.05
UBE2D3-220ENST00000505307 SUB1P53999 127 aaKnown RBP eCLIP14.76□□□□□ -0.05
UBE2D3-220ENST00000505307 PIGPP57054 158 aa14.76□□□□□ -0.05
UBE2D3-220ENST00000505307 SLC35G3Q8N808 338 aa14.76□□□□□ -0.05
UBE2D3-220ENST00000505307 ZFAND1Q8TCF1 268 aa14.76□□□□□ -0.05
UBE2D3-220ENST00000505307 KLK11Q9UBX7 282 aa14.76□□□□□ -0.05
UBE2D3-220ENST00000505307 MTFP1Q9UDX5 166 aa14.76□□□□□ -0.05
UBE2D3-220ENST00000505307 RPL35AP18077 110 aaKnown RBP14.75□□□□□ -0.05
UBE2D3-220ENST00000505307 FAM90A2PQ658T7 463 aa14.75□□□□□ -0.05
UBE2D3-220ENST00000505307 CCDC71LQ8N9Z2 235 aa14.75□□□□□ -0.05
UBE2D3-220ENST00000505307 PDCD10Q9BUL8 212 aa14.75□□□□□ -0.05
UBE2D3-220ENST00000505307 CSTL1Q9H114 145 aa14.75□□□□□ -0.05
UBE2D3-220ENST00000505307 PLECQ15149 4684 aaKnown RBP14.75□□□□□ -0.05
UBE2D3-220ENST00000505307 A0A0B4J293 547 aa14.74□□□□□ -0.05
UBE2D3-220ENST00000505307 C3orf85A0A1B0GTC6 90 aa14.74□□□□□ -0.05
UBE2D3-220ENST00000505307 GABARAPO95166 117 aa14.74□□□□□ -0.05
UBE2D3-220ENST00000505307 IFNA17P01571 189 aa14.74□□□□□ -0.05
UBE2D3-220ENST00000505307 IGKV1-5P01602 117 aa14.74□□□□□ -0.05
UBE2D3-220ENST00000505307 CD3DP04234 171 aa14.74□□□□□ -0.05
UBE2D3-220ENST00000505307 P0C879 139 aa14.74□□□□□ -0.05
UBE2D3-220ENST00000505307 PMS2P11Q13670 270 aa14.74□□□□□ -0.05
UBE2D3-220ENST00000505307 PVRIGQ6DKI7 326 aa14.74□□□□□ -0.05
UBE2D3-220ENST00000505307 CEMP1Q6PRD7 247 aaPredicted RBP14.74□□□□□ -0.05
UBE2D3-220ENST00000505307 ZNF600Q6ZNG1 722 aa14.74□□□□□ -0.05
UBE2D3-220ENST00000505307 OR52I2Q8NH67 350 aa14.74□□□□□ -0.05
UBE2D3-220ENST00000505307 TERB2Q8NHR7 220 aa14.74□□□□□ -0.05
UBE2D3-220ENST00000505307 GATAD1Q8WUU5 269 aa14.74□□□□□ -0.05
UBE2D3-220ENST00000505307 LINC00476Q8WZB0 136 aa14.74□□□□□ -0.05
UBE2D3-220ENST00000505307 TP53RKQ96S44 253 aa14.74□□□□□ -0.05
UBE2D3-220ENST00000505307 COPZ2Q9P299 210 aa14.74□□□□□ -0.05
UBE2D3-220ENST00000505307 EXTL2Q9UBQ6 330 aa14.74□□□□□ -0.05
UBE2D3-220ENST00000505307 KLK5Q9Y337 293 aaPredicted RBP14.74□□□□□ -0.05
UBE2D3-220ENST00000505307 MPTX1A8MV57 137 aa14.73□□□□□ -0.05
UBE2D3-220ENST00000505307 IGHV3-48P01763 117 aa14.73□□□□□ -0.05
UBE2D3-220ENST00000505307 PI3P19957 117 aa14.73□□□□□ -0.05
UBE2D3-220ENST00000505307 CTF1Q16619 201 aa14.73□□□□□ -0.05
UBE2D3-220ENST00000505307 TOMM20LQ6UXN7 152 aa14.73□□□□□ -0.05
UBE2D3-220ENST00000505307 APRG1Q8IVJ8 170 aa14.73□□□□□ -0.05
UBE2D3-220ENST00000505307 RRNAD1Q96FB5 475 aaKnown RBP14.73□□□□□ -0.05
UBE2D3-220ENST00000505307 TMEM231Q9H6L2 316 aa14.73□□□□□ -0.05
UBE2D3-220ENST00000505307 VSIRQ9H7M9 311 aa14.73□□□□□ -0.05
UBE2D3-220ENST00000505307 IGHV3-49A0A0A0MS15 119 aa14.72□□□□□ -0.05
UBE2D3-220ENST00000505307 TRAV2A0A0B4J234 112 aa14.72□□□□□ -0.05
UBE2D3-220ENST00000505307 ST8SIA3O43173 380 aa14.72□□□□□ -0.05
UBE2D3-220ENST00000505307 SCGB2A1O75556 95 aa14.72□□□□□ -0.05
UBE2D3-220ENST00000505307 TFPI2P48307 235 aa14.72□□□□□ -0.05
UBE2D3-220ENST00000505307 TAS2R19P59542 299 aa14.72□□□□□ -0.05
UBE2D3-220ENST00000505307 IZUMO4Q1ZYL8 232 aa14.72□□□□□ -0.05
UBE2D3-220ENST00000505307 TRIM16LQ309B1 348 aa14.72□□□□□ -0.05
UBE2D3-220ENST00000505307 RNASE12Q5GAN4 147 aaKnown RBP14.72□□□□□ -0.05
UBE2D3-220ENST00000505307 TCF24Q7RTU0 167 aa14.72□□□□□ -0.05
UBE2D3-220ENST00000505307 TMEM229BQ8NBD8 167 aa14.72□□□□□ -0.05
UBE2D3-220ENST00000505307 ENY2Q9NPA8 101 aa14.72□□□□□ -0.05
UBE2D3-220ENST00000505307 DFFBO76075 338 aa14.71□□□□□ -0.05
UBE2D3-220ENST00000505307 TMEM50AO95807 157 aa14.71□□□□□ -0.05
UBE2D3-220ENST00000505307 CD74P04233 296 aa14.71□□□□□ -0.05
UBE2D3-220ENST00000505307 UCP1P25874 307 aa14.71□□□□□ -0.05
UBE2D3-220ENST00000505307 SSBP1Q04837 148 aaKnown RBP14.71□□□□□ -0.05
UBE2D3-220ENST00000505307 SPINK9Q5DT21 86 aa14.71□□□□□ -0.05
UBE2D3-220ENST00000505307 ABHD1Q96SE0 405 aa14.71□□□□□ -0.05
UBE2D3-220ENST00000505307 PUS1Q9Y606 427 aaKnown RBP eCLIP14.71□□□□□ -0.05
UBE2D3-220ENST00000505307 ALMS1Q8TCU4 4167 aa14.7□□□□□ -0.06
UBE2D3-220ENST00000505307 IGKV3-7A0A075B6H7 116 aa14.7□□□□□ -0.06
UBE2D3-220ENST00000505307 A0A1W2PS18 150 aa14.7□□□□□ -0.06
UBE2D3-220ENST00000505307 DNASE2O00115 360 aaPredicted RBP14.7□□□□□ -0.06
UBE2D3-220ENST00000505307 RAB3DO95716 219 aa14.7□□□□□ -0.06
UBE2D3-220ENST00000505307 RPL5P46777 297 aaKnown RBP14.7□□□□□ -0.06
UBE2D3-220ENST00000505307 HOXA1P49639 335 aaPredicted RBP14.7□□□□□ -0.06
UBE2D3-220ENST00000505307 PPP5CP53041 499 aa14.7□□□□□ -0.06
UBE2D3-220ENST00000505307 MRPS10P82664 201 aaKnown RBP14.7□□□□□ -0.06
UBE2D3-220ENST00000505307 EWSR1Q01844 656 aaKnown RBP eCLIP14.7□□□□□ -0.065e-7■■■■■ 34.3
UBE2D3-220ENST00000505307 FAM219AQ8IW50 185 aa14.7□□□□□ -0.06
UBE2D3-220ENST00000505307 GBGT1Q8N5D6 347 aa14.7□□□□□ -0.06
UBE2D3-220ENST00000505307 ST8SIA2Q92186 375 aa14.7□□□□□ -0.06
UBE2D3-220ENST00000505307 IGHV3OR16-13A0A075B7E8 117 aa14.69□□□□□ -0.06
UBE2D3-220ENST00000505307 IGHV3-74A0A0B4J1X5 117 aa14.69□□□□□ -0.06
UBE2D3-220ENST00000505307 GABARAPH6UMI1 98 aa14.69□□□□□ -0.06
UBE2D3-220ENST00000505307 LY6G6CO95867 125 aa14.69□□□□□ -0.06
UBE2D3-220ENST00000505307 RNASE2P10153 161 aaKnown RBP14.69□□□□□ -0.06
UBE2D3-220ENST00000505307 ETV6P41212 452 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms