RNA–Protein interactions for RNA: ENST00000505073.5

CCSER1-205, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-205ENST00000505073 TDRG1Q3Y452 100 aa10.79□□□□□ -0.68
CCSER1-205ENST00000505073 LRRC10Q5BKY1 277 aa10.79□□□□□ -0.68
CCSER1-205ENST00000505073 TMEM200BQ69YZ2 307 aa10.79□□□□□ -0.68
CCSER1-205ENST00000505073 C1orf229Q6ZS94 237 aaPredicted RBP10.79□□□□□ -0.68
CCSER1-205ENST00000505073 VAMP8Q9BV40 100 aa10.79□□□□□ -0.68
CCSER1-205ENST00000505073 LINC00312Q9Y6C7 94 aa10.79□□□□□ -0.68
CCSER1-205ENST00000505073 M0R1X1 148 aa10.78□□□□□ -0.68
CCSER1-205ENST00000505073 RBFOX2O43251 390 aaKnown RBP eCLIP10.78□□□□□ -0.68
CCSER1-205ENST00000505073 IL6RP08887 468 aaPredicted RBP10.78□□□□□ -0.68
CCSER1-205ENST00000505073 P0C879 139 aa10.78□□□□□ -0.68
CCSER1-205ENST00000505073 LINC00310P59036 64 aa10.78□□□□□ -0.68
CCSER1-205ENST00000505073 C11orf71Q6IPW1 123 aa10.78□□□□□ -0.68
CCSER1-205ENST00000505073 CHODLQ9H9P2 273 aa10.78□□□□□ -0.68
CCSER1-205ENST00000505073 RAB9BQ9NP90 201 aa10.78□□□□□ -0.68
CCSER1-205ENST00000505073 ZNRD1Q9P1U0 126 aa10.78□□□□□ -0.68
CCSER1-205ENST00000505073 PAM16Q9Y3D7 125 aa10.78□□□□□ -0.68
CCSER1-205ENST00000505073 PGPEP1LA6NFU8 196 aa10.78□□□□□ -0.68
CCSER1-205ENST00000505073 KRASP01116 189 aa10.78□□□□□ -0.68
CCSER1-205ENST00000505073 G6PCP35575 357 aa10.78□□□□□ -0.68
CCSER1-205ENST00000505073 TMEM249Q2WGJ8 235 aa10.78□□□□□ -0.68
CCSER1-205ENST00000505073 DTD1Q8TEA8 209 aa10.78□□□□□ -0.68
CCSER1-205ENST00000505073 HSPB9Q9BQS6 159 aa10.78□□□□□ -0.68
CCSER1-205ENST00000505073 PATZ1Q9HBE1 687 aaKnown RBP10.78□□□□□ -0.68
CCSER1-205ENST00000505073 EPG5Q9HCE0 2579 aa10.78□□□□□ -0.68
CCSER1-205ENST00000505073 MALRD1Q5VYJ5 2156 aa10.77□□□□□ -0.68
CCSER1-205ENST00000505073 DUTP33316 252 aaKnown RBP10.77□□□□□ -0.69
CCSER1-205ENST00000505073 CDKN1AP38936 164 aa10.77□□□□□ -0.69
CCSER1-205ENST00000505073 C21orf62-AS1Q17RA5 79 aa10.77□□□□□ -0.69
CCSER1-205ENST00000505073 BBC3Q96PG8 261 aaPredicted RBP10.77□□□□□ -0.69
CCSER1-205ENST00000505073 HSD17B10Q99714 261 aaKnown RBP10.77□□□□□ -0.69
CCSER1-205ENST00000505073 RAB1BQ9H0U4 201 aa10.77□□□□□ -0.69
CCSER1-205ENST00000505073 LINC00574Q9H8X3 128 aa10.77□□□□□ -0.69
CCSER1-205ENST00000505073 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.77□□□□□ -0.69
CCSER1-205ENST00000505073 SERF1AO75920 110 aa10.77□□□□□ -0.69
CCSER1-205ENST00000505073 CRISP2P16562 243 aa10.77□□□□□ -0.69
CCSER1-205ENST00000505073 RPS16P62249 146 aaKnown RBP10.77□□□□□ -0.69
CCSER1-205ENST00000505073 MEF2CQ06413 473 aaPredicted RBP10.77□□□□□ -0.69
CCSER1-205ENST00000505073 RAB1CQ92928 201 aa10.77□□□□□ -0.69
CCSER1-205ENST00000505073 ZDHHC16Q969W1 377 aa10.77□□□□□ -0.69
CCSER1-205ENST00000505073 CIB3Q96Q77 187 aaPredicted RBP10.77□□□□□ -0.69
CCSER1-205ENST00000505073 KAAG1Q9UBP8 84 aa10.77□□□□□ -0.69
CCSER1-205ENST00000505073 RPUSD1Q9UJJ7 312 aaKnown RBP10.77□□□□□ -0.69
CCSER1-205ENST00000505073 FLNCQ14315 2725 aa10.77□□□□□ -0.69
CCSER1-205ENST00000505073 BATFQ16520 125 aa10.76□□□□□ -0.69
CCSER1-205ENST00000505073 LYG1Q8N1E2 194 aa10.76□□□□□ -0.69
CCSER1-205ENST00000505073 ZNF439Q8NDP4 499 aa10.76□□□□□ -0.69
CCSER1-205ENST00000505073 VN1R17PQ8TDU5 208 aa10.76□□□□□ -0.69
CCSER1-205ENST00000505073 ZNF714Q96N38 554 aa10.76□□□□□ -0.69
CCSER1-205ENST00000505073 UBTD1Q9HAC8 227 aa10.76□□□□□ -0.69
CCSER1-205ENST00000505073 TRBV20OR9-2A0A075B6H5 130 aa10.76□□□□□ -0.69
CCSER1-205ENST00000505073 TRAV9-1A0A075B6T8 112 aa10.76□□□□□ -0.69
CCSER1-205ENST00000505073 FCGR3BO75015 233 aa10.76□□□□□ -0.69
CCSER1-205ENST00000505073 CBLN1P23435 193 aa10.76□□□□□ -0.69
CCSER1-205ENST00000505073 Q8N7P7 452 aa10.76□□□□□ -0.69
CCSER1-205ENST00000505073 OR5AU1Q8NGC0 362 aa10.76□□□□□ -0.69
CCSER1-205ENST00000505073 MRPL18Q9H0U6 180 aaKnown RBP10.76□□□□□ -0.69
CCSER1-205ENST00000505073 GAL3ST2Q9H3Q3 398 aa10.76□□□□□ -0.69
CCSER1-205ENST00000505073 SAA2-SAA4A0A096LPE2 208 aa10.75□□□□□ -0.69
CCSER1-205ENST00000505073 SAA2P0DJI9 122 aaPredicted RBP10.75□□□□□ -0.69
CCSER1-205ENST00000505073 RAB7AP51149 207 aa10.75□□□□□ -0.69
CCSER1-205ENST00000505073 OR5I1Q13606 314 aa10.75□□□□□ -0.69
CCSER1-205ENST00000505073 COL5A1-AS1Q5SY13 56 aa10.75□□□□□ -0.69
CCSER1-205ENST00000505073 OR10G8Q8NGN5 311 aa10.75□□□□□ -0.69
CCSER1-205ENST00000505073 TXNDC17Q9BRA2 123 aa10.75□□□□□ -0.69
CCSER1-205ENST00000505073 USP9XQ93008 2570 aaPredicted RBP10.75□□□□□ -0.69
CCSER1-205ENST00000505073 ITGB1BP1O14713 200 aa10.75□□□□□ -0.69
CCSER1-205ENST00000505073 COMPP49747 757 aaPredicted RBP10.75□□□□□ -0.69
CCSER1-205ENST00000505073 GCSAMLQ5JQS6 135 aa10.75□□□□□ -0.69
CCSER1-205ENST00000505073 PCP4P48539 62 aa10.74□□□□□ -0.69
CCSER1-205ENST00000505073 DMRTA1Q5VZB9 504 aa10.74□□□□□ -0.69
CCSER1-205ENST00000505073 DTX2Q86UW9 622 aa10.74□□□□□ -0.69
CCSER1-205ENST00000505073 WDR83OSQ9Y284 106 aa10.74□□□□□ -0.69
CCSER1-205ENST00000505073 MYO18BQ8IUG5 2567 aa10.74□□□□□ -0.69
CCSER1-205ENST00000505073 A0A1W2PPV4 95 aa10.74□□□□□ -0.69
CCSER1-205ENST00000505073 ZNF90Q03938 601 aa10.74□□□□□ -0.69
CCSER1-205ENST00000505073 OR4B1Q8NGF8 309 aa10.74□□□□□ -0.69
CCSER1-205ENST00000505073 SAMD10Q9BYL1 202 aa10.74□□□□□ -0.69
CCSER1-205ENST00000505073 IL36BQ9NZH7 164 aa10.74□□□□□ -0.69
CCSER1-205ENST00000505073 COL12A1Q99715 3063 aa10.74□□□□□ -0.69
CCSER1-205ENST00000505073 ZNF462Q96JM2 2506 aa10.74□□□□□ -0.69
CCSER1-205ENST00000505073 RAB29O14966 203 aa10.73□□□□□ -0.69
CCSER1-205ENST00000505073 IGFBP2P18065 325 aa10.73□□□□□ -0.69
CCSER1-205ENST00000505073 SLC25A48Q6ZT89 311 aaKnown RBP10.73□□□□□ -0.69
CCSER1-205ENST00000505073 BAGE3Q86Y29 109 aa10.73□□□□□ -0.69
CCSER1-205ENST00000505073 BAGE2Q86Y30 109 aa10.73□□□□□ -0.69
CCSER1-205ENST00000505073 TCTEX1D1Q8N7M0 179 aa10.73□□□□□ -0.69
CCSER1-205ENST00000505073 FAM216AQ8WUB2 273 aa10.73□□□□□ -0.69
CCSER1-205ENST00000505073 ZFP30Q9Y2G7 519 aa10.73□□□□□ -0.69
CCSER1-205ENST00000505073 SCO2A0A1W2PP80 73 aa10.73□□□□□ -0.69
CCSER1-205ENST00000505073 NDUFS7O75251 213 aa10.73□□□□□ -0.69
CCSER1-205ENST00000505073 ARL14EPLP0DKL9 152 aa10.73□□□□□ -0.69
CCSER1-205ENST00000505073 HNF1AP20823 631 aa10.73□□□□□ -0.69
CCSER1-205ENST00000505073 Q0VG73 95 aa10.73□□□□□ -0.69
CCSER1-205ENST00000505073 SPINK9Q5DT21 86 aa10.73□□□□□ -0.69
CCSER1-205ENST00000505073 ZNF841Q6ZN19 808 aa10.73□□□□□ -0.69
CCSER1-205ENST00000505073 OCC1Q8TAD7 63 aa10.73□□□□□ -0.69
CCSER1-205ENST00000505073 S1PR3Q99500 378 aa10.73□□□□□ -0.69
CCSER1-205ENST00000505073 QTRT1Q9BXR0 403 aaKnown RBP10.73□□□□□ -0.69
CCSER1-205ENST00000505073 DOPEY1Q5JWR5 2465 aa10.73□□□□□ -0.69
CCSER1-205ENST00000505073 C15orf62A8K5M9 175 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms