RNA–Protein interactions for RNA: ENST00000504878.1

CCNH-203, Transcript of cyclin H, humanhuman

TSL 1 (best) BASIC

Gene CCNH, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNH-203ENST00000504878 PVRIGQ6DKI7 326 aa9.07□□□□□ -0.96
CCNH-203ENST00000504878 LCN12Q6JVE5 192 aa9.07□□□□□ -0.96
CCNH-203ENST00000504878 SGPP2Q8IWX5 399 aa9.07□□□□□ -0.96
CCNH-203ENST00000504878 SLC35G3Q8N808 338 aa9.07□□□□□ -0.96
CCNH-203ENST00000504878 OR2K2Q8NGT1 345 aa9.07□□□□□ -0.96
CCNH-203ENST00000504878 RNASE11Q8TAA1 199 aaKnown RBP9.07□□□□□ -0.96
CCNH-203ENST00000504878 DEDD2Q8WXF8 326 aa9.07□□□□□ -0.96
CCNH-203ENST00000504878 BSCL2Q96G97 398 aaPredicted RBP9.07□□□□□ -0.96
CCNH-203ENST00000504878 FRMD6-AS1P0C7T7 363 aa9.06□□□□□ -0.96
CCNH-203ENST00000504878 AKR1C4P17516 323 aa9.06□□□□□ -0.96
CCNH-203ENST00000504878 ERHP84090 104 aaKnown RBP9.06□□□□□ -0.96
CCNH-203ENST00000504878 BAK1Q16611 211 aa9.06□□□□□ -0.96
CCNH-203ENST00000504878 TM4SF20Q53R12 229 aa9.06□□□□□ -0.96
CCNH-203ENST00000504878 SPSB3Q6PJ21 355 aa9.06□□□□□ -0.96
CCNH-203ENST00000504878 TMEM190Q8WZ59 177 aa9.06□□□□□ -0.96
CCNH-203ENST00000504878 IL22RA2Q969J5 263 aa9.06□□□□□ -0.96
CCNH-203ENST00000504878 GPR146Q96CH1 333 aa9.06□□□□□ -0.96
CCNH-203ENST00000504878 MISP3Q96FF7 219 aa9.06□□□□□ -0.96
CCNH-203ENST00000504878 SDHCQ99643 169 aaPredicted RBP9.06□□□□□ -0.96
CCNH-203ENST00000504878 NDUFA13Q9P0J0 144 aa9.06□□□□□ -0.96
CCNH-203ENST00000504878 CACNG5Q9UF02 275 aa9.06□□□□□ -0.96
CCNH-203ENST00000504878 ZNF785A8K8V0 405 aa9.05□□□□□ -0.96
CCNH-203ENST00000504878 MT-CO2P00403 227 aa9.05□□□□□ -0.96
CCNH-203ENST00000504878 IGHV3-48P01763 117 aa9.05□□□□□ -0.96
CCNH-203ENST00000504878 CTSGP08311 255 aa9.05□□□□□ -0.96
CCNH-203ENST00000504878 C8orf88P0DMB2 117 aa9.05□□□□□ -0.96
CCNH-203ENST00000504878 IGHV4-30-4P0DP06 118 aa9.05□□□□□ -0.96
CCNH-203ENST00000504878 RNASE2P10153 161 aaKnown RBP9.05□□□□□ -0.96
CCNH-203ENST00000504878 FCGR2BP31994 310 aaPredicted RBP9.05□□□□□ -0.96
CCNH-203ENST00000504878 BSXQ3C1V8 233 aa9.05□□□□□ -0.96
CCNH-203ENST00000504878 UBAC2Q8NBM4 344 aa9.05□□□□□ -0.96
CCNH-203ENST00000504878 OR52E5Q8NH55 327 aa9.05□□□□□ -0.96
CCNH-203ENST00000504878 DYNLRB2Q8TF09 96 aa9.05□□□□□ -0.96
CCNH-203ENST00000504878 ASCL2Q99929 193 aa9.05□□□□□ -0.96
CCNH-203ENST00000504878 PDCD10Q9BUL8 212 aa9.05□□□□□ -0.96
CCNH-203ENST00000504878 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.05□□□□□ -0.96
CCNH-203ENST00000504878 TECRQ9NZ01 308 aaKnown RBP9.05□□□□□ -0.96
CCNH-203ENST00000504878 MLXQ9UH92 298 aa9.05□□□□□ -0.96
CCNH-203ENST00000504878 KCNIP3Q9Y2W7 256 aa9.05□□□□□ -0.96
CCNH-203ENST00000504878 SELENOKQ9Y6D0 94 aa9.05□□□□□ -0.96
CCNH-203ENST00000504878 DNAH7Q8WXX0 4024 aa9.05□□□□□ -0.96
CCNH-203ENST00000504878 NHLRC4P0CG21 123 aaPredicted RBP9.04□□□□□ -0.96
CCNH-203ENST00000504878 SNCAP37840 140 aa9.04□□□□□ -0.96
CCNH-203ENST00000504878 HOXA1P49639 335 aaPredicted RBP9.04□□□□□ -0.96
CCNH-203ENST00000504878 ELLP55199 621 aaPredicted RBP9.04□□□□□ -0.96
CCNH-203ENST00000504878 SPCS3P61009 180 aa9.04□□□□□ -0.96
CCNH-203ENST00000504878 Q56UQ5 140 aa9.04□□□□□ -0.96
CCNH-203ENST00000504878 NMSQ5H8A3 153 aa9.04□□□□□ -0.96
CCNH-203ENST00000504878 ZNF57Q68EA5 555 aaPredicted RBP9.04□□□□□ -0.96
CCNH-203ENST00000504878 LYZL2Q7Z4W2 148 aa9.04□□□□□ -0.96
CCNH-203ENST00000504878 TMED4Q7Z7H5 227 aa9.04□□□□□ -0.96
CCNH-203ENST00000504878 SBSPONQ8IVN8 264 aa9.04□□□□□ -0.96
CCNH-203ENST00000504878 UXS1Q8NBZ7 420 aa9.04□□□□□ -0.96
CCNH-203ENST00000504878 PINX1Q96BK5 328 aaKnown RBP9.04□□□□□ -0.96
CCNH-203ENST00000504878 SLC25A21Q9BQT8 299 aaPredicted RBP9.04□□□□□ -0.96
CCNH-203ENST00000504878 A0A0B4J2A0 478 aa9.03□□□□□ -0.96
CCNH-203ENST00000504878 A8MZ25 164 aa9.03□□□□□ -0.96
CCNH-203ENST00000504878 NDUFA4O00483 81 aa9.03□□□□□ -0.96
CCNH-203ENST00000504878 MFAP4P55083 255 aa9.03□□□□□ -0.96
CCNH-203ENST00000504878 TMEM128Q5BJH2 165 aa9.03□□□□□ -0.96
CCNH-203ENST00000504878 BTNL8Q6UX41 500 aa9.03□□□□□ -0.96
CCNH-203ENST00000504878 TMEM61Q8N0U2 210 aa9.03□□□□□ -0.96
CCNH-203ENST00000504878 MARC2Q969Z3 335 aa9.03□□□□□ -0.96
CCNH-203ENST00000504878 WDR89Q96FK6 387 aaPredicted RBP9.03□□□□□ -0.96
CCNH-203ENST00000504878 TXN2Q99757 166 aa9.03□□□□□ -0.96
CCNH-203ENST00000504878 PALMDQ9NP74 551 aa9.03□□□□□ -0.96
CCNH-203ENST00000504878 DAZ1Q9NQZ3 744 aaKnown RBP9.03□□□□□ -0.96
CCNH-203ENST00000504878 C19orf73Q9NVV2 129 aa9.03□□□□□ -0.96
CCNH-203ENST00000504878 SHPKQ9UHJ6 478 aa9.03□□□□□ -0.96
CCNH-203ENST00000504878 UFC1Q9Y3C8 167 aa9.03□□□□□ -0.96
CCNH-203ENST00000504878 IGHV3OR16-8A0A075B7F1 116 aa9.02□□□□□ -0.96
CCNH-203ENST00000504878 LOC100996750A0A140TA64 210 aa9.02□□□□□ -0.96
CCNH-203ENST00000504878 SULT1A3P0DMM9 295 aa9.02□□□□□ -0.96
CCNH-203ENST00000504878 SULT1A4P0DMN0 295 aa9.02□□□□□ -0.96
CCNH-203ENST00000504878 CCR6P51684 374 aa9.02□□□□□ -0.96
CCNH-203ENST00000504878 SRPXP78539 464 aa9.02□□□□□ -0.96
CCNH-203ENST00000504878 GTSCR1Q86UQ5 136 aa9.02□□□□□ -0.96
CCNH-203ENST00000504878 KRTAP4-6Q9BYQ5 205 aa9.02□□□□□ -0.96
CCNH-203ENST00000504878 FNDC4Q9H6D8 234 aaPredicted RBP9.02□□□□□ -0.96
CCNH-203ENST00000504878 ENY2Q9NPA8 101 aa9.02□□□□□ -0.96
CCNH-203ENST00000504878 GAR1Q9NY12 217 aaKnown RBP9.02□□□□□ -0.96
CCNH-203ENST00000504878 MRPL27Q9P0M9 148 aaKnown RBP9.02□□□□□ -0.96
CCNH-203ENST00000504878 NUPL2O15504 423 aaKnown RBP9.02□□□□□ -0.97
CCNH-203ENST00000504878 NXPH3O95157 252 aa9.02□□□□□ -0.97
CCNH-203ENST00000504878 CD7P09564 240 aa9.02□□□□□ -0.97
CCNH-203ENST00000504878 ANXA3P12429 323 aa9.02□□□□□ -0.97
CCNH-203ENST00000504878 SUB1P53999 127 aaKnown RBP eCLIP9.02□□□□□ -0.97
CCNH-203ENST00000504878 CD81P60033 236 aa9.02□□□□□ -0.97
CCNH-203ENST00000504878 RBMS2Q15434 407 aaKnown RBP9.02□□□□□ -0.97
CCNH-203ENST00000504878 ANKRD55Q3KP44 614 aa9.02□□□□□ -0.97
CCNH-203ENST00000504878 TRIQKQ629K1 86 aa9.02□□□□□ -0.97
CCNH-203ENST00000504878 LGI3Q8N145 548 aa9.02□□□□□ -0.97
CCNH-203ENST00000504878 TMEM170AQ8WVE7 144 aa9.02□□□□□ -0.97
CCNH-203ENST00000504878 MRPL36Q9P0J6 103 aaKnown RBP9.02□□□□□ -0.97
CCNH-203ENST00000504878 U3KQK5 164 aa9.02□□□□□ -0.97
CCNH-203ENST00000504878 NAP1L6A6NFF2 107 aa9.01□□□□□ -0.97
CCNH-203ENST00000504878 C15orf62A8K5M9 175 aa9.01□□□□□ -0.97
CCNH-203ENST00000504878 CORTO00230 105 aa9.01□□□□□ -0.97
CCNH-203ENST00000504878 ZNF207O43670 478 aaKnown RBP9.01□□□□□ -0.97
CCNH-203ENST00000504878 GNG7O60262 68 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms