RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 SPRNQ5BIV9 151 aa11.59□□□□□ -0.55
TCOF1-207ENST00000504761 OR51M1Q9H341 326 aa11.59□□□□□ -0.55
TCOF1-207ENST00000504761 SMDT1Q9H4I9 107 aa11.59□□□□□ -0.55
TCOF1-207ENST00000504761 NBR2O15453 112 aa11.58□□□□□ -0.55
TCOF1-207ENST00000504761 CSN3P07498 182 aa11.58□□□□□ -0.55
TCOF1-207ENST00000504761 HIST1H1BP16401 226 aaKnown RBP11.58□□□□□ -0.55
TCOF1-207ENST00000504761 GCHFRP30047 84 aa11.58□□□□□ -0.55
TCOF1-207ENST00000504761 IER3P46695 156 aa11.58□□□□□ -0.55
TCOF1-207ENST00000504761 SCGB2A2Q13296 93 aa11.58□□□□□ -0.55
TCOF1-207ENST00000504761 ZNF585BQ52M93 769 aa11.58□□□□□ -0.55
TCOF1-207ENST00000504761 CYP2G1PQ6ZSU1 146 aa11.58□□□□□ -0.55
TCOF1-207ENST00000504761 GATAD1Q8WUU5 269 aa11.58□□□□□ -0.55
TCOF1-207ENST00000504761 LHFPL4Q7Z7J7 247 aa11.58□□□□□ -0.56
TCOF1-207ENST00000504761 KRTDAPP60985 99 aa11.58□□□□□ -0.56
TCOF1-207ENST00000504761 KIR3DL3Q8N743 410 aa11.58□□□□□ -0.56
TCOF1-207ENST00000504761 CYTL1Q9NRR1 136 aa11.58□□□□□ -0.56
TCOF1-207ENST00000504761 B4DEV8 164 aa11.58□□□□□ -0.56
TCOF1-207ENST00000504761 BRD3OSQ6XYD6 125 aa11.58□□□□□ -0.56
TCOF1-207ENST00000504761 Q6ZS49 121 aa11.58□□□□□ -0.56
TCOF1-207ENST00000504761 TMEM18Q96B42 140 aa11.58□□□□□ -0.56
TCOF1-207ENST00000504761 SLC25A33Q9BSK2 321 aa11.58□□□□□ -0.56
TCOF1-207ENST00000504761 FBXL7Q9UJT9 491 aa11.58□□□□□ -0.56
TCOF1-207ENST00000504761 LMO1P25800 156 aa11.57□□□□□ -0.56
TCOF1-207ENST00000504761 OR2D3Q8NGH3 330 aa11.57□□□□□ -0.56
TCOF1-207ENST00000504761 ARPC1AQ92747 370 aa11.57□□□□□ -0.56
TCOF1-207ENST00000504761 C12orf57Q99622 126 aa11.57□□□□□ -0.56
TCOF1-207ENST00000504761 HIVEP3Q5T1R4 2406 aa11.57□□□□□ -0.56
TCOF1-207ENST00000504761 IGHV3-11P01762 117 aa11.57□□□□□ -0.56
TCOF1-207ENST00000504761 WNT2P09544 360 aa11.57□□□□□ -0.56
TCOF1-207ENST00000504761 GPR183P32249 361 aa11.57□□□□□ -0.56
TCOF1-207ENST00000504761 TPPP2P59282 170 aa11.57□□□□□ -0.56
TCOF1-207ENST00000504761 MIR17HGQ75NE6 70 aa11.57□□□□□ -0.56
TCOF1-207ENST00000504761 ANAPC16Q96DE5 110 aa11.57□□□□□ -0.56
TCOF1-207ENST00000504761 IGLV3-9A0A075B6K5 115 aa11.57□□□□□ -0.56
TCOF1-207ENST00000504761 TEX50A0A1B0GTY4 177 aa11.57□□□□□ -0.56
TCOF1-207ENST00000504761 NDUFS7O75251 213 aa11.57□□□□□ -0.56
TCOF1-207ENST00000504761 MMP23AO75900 390 aa11.57□□□□□ -0.56
TCOF1-207ENST00000504761 BMI1P35226 326 aa11.57□□□□□ -0.56
TCOF1-207ENST00000504761 TRGV3P03979 118 aa11.56□□□□□ -0.56
TCOF1-207ENST00000504761 COMPP49747 757 aaPredicted RBP11.56□□□□□ -0.56
TCOF1-207ENST00000504761 TMEM219Q86XT9 240 aa11.56□□□□□ -0.56
TCOF1-207ENST00000504761 TRAV34A0A0B4J273 112 aa11.56□□□□□ -0.56
TCOF1-207ENST00000504761 ATP5G3P48201 142 aa11.56□□□□□ -0.56
TCOF1-207ENST00000504761 AARDQ4LEZ3 155 aa11.56□□□□□ -0.56
TCOF1-207ENST00000504761 KLF17Q5JT82 389 aaPredicted RBP11.56□□□□□ -0.56
TCOF1-207ENST00000504761 LEMD1Q68G75 181 aa11.56□□□□□ -0.56
TCOF1-207ENST00000504761 USP9YO00507 2555 aaPredicted RBP11.56□□□□□ -0.56
TCOF1-207ENST00000504761 PHOX2AO14813 284 aa11.56□□□□□ -0.56
TCOF1-207ENST00000504761 TMEM208Q9BTX3 173 aa11.56□□□□□ -0.56
TCOF1-207ENST00000504761 C20orf202A1L168 122 aa11.56□□□□□ -0.56
TCOF1-207ENST00000504761 BMPR1BO00238 502 aa11.56□□□□□ -0.56
TCOF1-207ENST00000504761 MFAP2P55001 183 aa11.56□□□□□ -0.56
TCOF1-207ENST00000504761 RNASEKQ6P5S7 137 aaKnown RBP11.56□□□□□ -0.56
TCOF1-207ENST00000504761 LOC102723971A0A1B0GUV8 181 aa11.55□□□□□ -0.56
TCOF1-207ENST00000504761 A8MXK9 166 aa11.55□□□□□ -0.56
TCOF1-207ENST00000504761 SNURFLB1AK76 121 aa11.55□□□□□ -0.56
TCOF1-207ENST00000504761 AMY1AP04745 511 aa11.55□□□□□ -0.56
TCOF1-207ENST00000504761 PRCDQ00LT1 54 aa11.55□□□□□ -0.56
TCOF1-207ENST00000504761 ZNF343Q6P1L6 599 aa11.55□□□□□ -0.56
TCOF1-207ENST00000504761 MAPK1IP1LQ8NDC0 245 aa11.55□□□□□ -0.56
TCOF1-207ENST00000504761 VMO1Q7Z5L0 202 aa11.55□□□□□ -0.56
TCOF1-207ENST00000504761 TMEM144Q7Z5S9 345 aa11.55□□□□□ -0.56
TCOF1-207ENST00000504761 C5orf17Q8NAS9 161 aa11.55□□□□□ -0.56
TCOF1-207ENST00000504761 METTL26Q96S19 204 aa11.55□□□□□ -0.56
TCOF1-207ENST00000504761 ZNF586Q9NXT0 402 aa11.55□□□□□ -0.56
TCOF1-207ENST00000504761 C21orf62Q9NYP8 219 aa11.55□□□□□ -0.56
TCOF1-207ENST00000504761 IGHV1-3A0A0C4DH29 117 aa11.55□□□□□ -0.56
TCOF1-207ENST00000504761 ATP5G2Q06055 141 aa11.55□□□□□ -0.56
TCOF1-207ENST00000504761 UFC1Q9Y3C8 167 aa11.55□□□□□ -0.56
TCOF1-207ENST00000504761 LYPD6Q86Y78 171 aa11.54□□□□□ -0.56
TCOF1-207ENST00000504761 C11orf53Q8IXP5 236 aa11.54□□□□□ -0.56
TCOF1-207ENST00000504761 CDH23Q9H251 3354 aa11.54□□□□□ -0.56
TCOF1-207ENST00000504761 WNK1Q9H4A3 2382 aa11.54□□□□□ -0.56
TCOF1-207ENST00000504761 SH2D7A6NKC9 451 aaPredicted RBP11.54□□□□□ -0.56
TCOF1-207ENST00000504761 ZNF253O75346 499 aa11.54□□□□□ -0.56
TCOF1-207ENST00000504761 MLANAQ16655 118 aa11.54□□□□□ -0.56
TCOF1-207ENST00000504761 SLC25A48Q6ZT89 311 aaKnown RBP11.54□□□□□ -0.56
TCOF1-207ENST00000504761 C16orf92Q96LL3 132 aa11.54□□□□□ -0.56
TCOF1-207ENST00000504761 GGACTQ9BVM4 153 aa11.54□□□□□ -0.56
TCOF1-207ENST00000504761 PRB1P04280 392 aa11.54□□□□□ -0.56
TCOF1-207ENST00000504761 GATA4P43694 442 aa11.54□□□□□ -0.56
TCOF1-207ENST00000504761 ATP5IP56385 69 aaPredicted RBP11.54□□□□□ -0.56
TCOF1-207ENST00000504761 PMS2P11Q13670 270 aa11.54□□□□□ -0.56
TCOF1-207ENST00000504761 ZNF705AQ6ZN79 300 aaPredicted RBP11.54□□□□□ -0.56
TCOF1-207ENST00000504761 GOLT1AQ6ZVE7 132 aa11.54□□□□□ -0.56
TCOF1-207ENST00000504761 ANAPC10Q9UM13 185 aa11.54□□□□□ -0.56
TCOF1-207ENST00000504761 ELOA3CA0A087WX78 387 aaPredicted RBP11.54□□□□□ -0.56
TCOF1-207ENST00000504761 F5H697 171 aa11.54□□□□□ -0.56
TCOF1-207ENST00000504761 TRGC2P03986 189 aa11.54□□□□□ -0.56
TCOF1-207ENST00000504761 S100A8P05109 93 aa11.54□□□□□ -0.56
TCOF1-207ENST00000504761 CRISP2P16562 243 aa11.54□□□□□ -0.56
TCOF1-207ENST00000504761 NOL4LQ96MY1 436 aaPredicted RBP11.54□□□□□ -0.56
TCOF1-207ENST00000504761 NBEAP1P0C6P0 100 aa11.53□□□□□ -0.56
TCOF1-207ENST00000504761 ZNF506Q5JVG8 444 aa11.53□□□□□ -0.56
TCOF1-207ENST00000504761 IBA57Q5T440 356 aaKnown RBP11.53□□□□□ -0.56
TCOF1-207ENST00000504761 CLEC19AQ6UXS0 136 aa11.53□□□□□ -0.56
TCOF1-207ENST00000504761 CENPVQ7Z7K6 275 aaPredicted RBP11.53□□□□□ -0.56
TCOF1-207ENST00000504761 AP1S3Q96PC3 154 aa11.53□□□□□ -0.56
TCOF1-207ENST00000504761 IFT22Q9H7X7 185 aa11.53□□□□□ -0.56
TCOF1-207ENST00000504761 TGIF2-C20orf24A0A0A6YYL0 155 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms