RNA–Protein interactions for RNA: ENST00000504531.2

CASC9-201, Transcript of cancer susceptibility 9, humanhuman

TSL 1 (best) BASIC

Gene CASC9, Length 1,164 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-201ENST00000504531 HMGB3O15347 200 aaKnown RBP7.16□□□□□ -1.26
CASC9-201ENST00000504531 SPRY3O43610 288 aa7.16□□□□□ -1.26
CASC9-201ENST00000504531 GCGP01275 180 aa7.16□□□□□ -1.26
CASC9-201ENST00000504531 CT45A6P0DMU7 189 aa7.16□□□□□ -1.26
CASC9-201ENST00000504531 CT45A5P0DMU8 189 aa7.16□□□□□ -1.26
CASC9-201ENST00000504531 CT45A7P0DMV0 189 aa7.16□□□□□ -1.26
CASC9-201ENST00000504531 USF1P22415 310 aaPredicted RBP7.16□□□□□ -1.26
CASC9-201ENST00000504531 NPPCP23582 126 aa7.16□□□□□ -1.26
CASC9-201ENST00000504531 GCHFRP30047 84 aa7.16□□□□□ -1.26
CASC9-201ENST00000504531 CCKARP32238 428 aa7.16□□□□□ -1.26
CASC9-201ENST00000504531 CHRNA7P36544 502 aa7.16□□□□□ -1.26
CASC9-201ENST00000504531 TAS2R45P59539 299 aa7.16□□□□□ -1.26
CASC9-201ENST00000504531 YPEL3P61236 119 aaPredicted RBP7.16□□□□□ -1.26
CASC9-201ENST00000504531 GNB1P62873 340 aa7.16□□□□□ -1.26
CASC9-201ENST00000504531 SRSF6Q13247 344 aaKnown RBP7.16□□□□□ -1.26
CASC9-201ENST00000504531 RPL39P5Q59GN2 51 aa7.16□□□□□ -1.26
CASC9-201ENST00000504531 ACTL10Q5JWF8 245 aa7.16□□□□□ -1.26
CASC9-201ENST00000504531 NCMAPQ5T1S8 102 aa7.16□□□□□ -1.26
CASC9-201ENST00000504531 SLC16A13Q7RTY0 426 aa7.16□□□□□ -1.26
CASC9-201ENST00000504531 CFHR4Q92496 578 aa7.16□□□□□ -1.26
CASC9-201ENST00000504531 TNFRSF14Q92956 283 aa7.16□□□□□ -1.26
CASC9-201ENST00000504531 MRPL32Q9BYC8 188 aaKnown RBP7.16□□□□□ -1.26
CASC9-201ENST00000504531 PLEKHA3Q9HB20 300 aa7.16□□□□□ -1.26
CASC9-201ENST00000504531 OR51B2Q9Y5P1 312 aa7.16□□□□□ -1.26
CASC9-201ENST00000504531 HEATR1Q9H583 2144 aaKnown RBP7.16□□□□□ -1.26
CASC9-201ENST00000504531 MGAQ8IWI9 3026 aa7.16□□□□□ -1.26
CASC9-201ENST00000504531 HECTD1Q9ULT8 2610 aa7.15□□□□□ -1.26
CASC9-201ENST00000504531 IGHV3-64DA0A0J9YX35 117 aa7.15□□□□□ -1.26
CASC9-201ENST00000504531 A0A1W2PRE2 83 aa7.15□□□□□ -1.26
CASC9-201ENST00000504531 J3QR06 171 aa7.15□□□□□ -1.26
CASC9-201ENST00000504531 APOA2P02652 100 aa7.15□□□□□ -1.26
CASC9-201ENST00000504531 LINC00869P0C866 280 aa7.15□□□□□ -1.26
CASC9-201ENST00000504531 PAX1P15863 534 aa7.15□□□□□ -1.26
CASC9-201ENST00000504531 MC5RP33032 325 aa7.15□□□□□ -1.26
CASC9-201ENST00000504531 COMPP49747 757 aaPredicted RBP7.15□□□□□ -1.26
CASC9-201ENST00000504531 SUB1P53999 127 aaKnown RBP eCLIP7.15□□□□□ -1.26
CASC9-201ENST00000504531 ERHP84090 104 aaKnown RBP7.15□□□□□ -1.26
CASC9-201ENST00000504531 JOSD1Q15040 202 aaPredicted RBP7.15□□□□□ -1.26
CASC9-201ENST00000504531 EFNB3Q15768 340 aa7.15□□□□□ -1.26
CASC9-201ENST00000504531 PYY3Q5JQD4 70 aa7.15□□□□□ -1.26
CASC9-201ENST00000504531 PVRIGQ6DKI7 326 aa7.15□□□□□ -1.26
CASC9-201ENST00000504531 FAM53AQ6NSI3 398 aaPredicted RBP7.15□□□□□ -1.26
CASC9-201ENST00000504531 TCF23Q7RTU1 214 aa7.15□□□□□ -1.26
CASC9-201ENST00000504531 PDPNQ86YL7 162 aa7.15□□□□□ -1.26
CASC9-201ENST00000504531 ABHD12Q8N2K0 398 aa7.15□□□□□ -1.26
CASC9-201ENST00000504531 OR1P1Q8NH06 330 aa7.15□□□□□ -1.26
CASC9-201ENST00000504531 TMEM167AQ8TBQ9 72 aa7.15□□□□□ -1.26
CASC9-201ENST00000504531 GATAD1Q8WUU5 269 aa7.15□□□□□ -1.26
CASC9-201ENST00000504531 PFDN5Q99471 154 aa7.15□□□□□ -1.26
CASC9-201ENST00000504531 SLC35D1Q9NTN3 355 aa7.15□□□□□ -1.26
CASC9-201ENST00000504531 TECRQ9NZ01 308 aaKnown RBP7.15□□□□□ -1.26
CASC9-201ENST00000504531 TP53TG5Q9Y2B4 290 aa7.15□□□□□ -1.26
CASC9-201ENST00000504531 TANC2Q9HCD6 1990 aa7.15□□□□□ -1.27
CASC9-201ENST00000504531 HCFC1P51610 2035 aa7.15□□□□□ -1.27
CASC9-201ENST00000504531 NAV2Q8IVL1 2488 aa7.15□□□□□ -1.27
CASC9-201ENST00000504531 PPIAL4EA0A075B759 164 aa7.14□□□□□ -1.27
CASC9-201ENST00000504531 IGHV3OR15-7A0A075B7D8 119 aa7.14□□□□□ -1.27
CASC9-201ENST00000504531 TEX50A0A1B0GTY4 177 aa7.14□□□□□ -1.27
CASC9-201ENST00000504531 PPIAL4DF5H284 164 aa7.14□□□□□ -1.27
CASC9-201ENST00000504531 SLC31A2O15432 143 aa7.14□□□□□ -1.27
CASC9-201ENST00000504531 CA2P00918 260 aa7.14□□□□□ -1.27
CASC9-201ENST00000504531 RBP4P02753 201 aa7.14□□□□□ -1.27
CASC9-201ENST00000504531 SOD3P08294 240 aa7.14□□□□□ -1.27
CASC9-201ENST00000504531 OR5G3P0C626 314 aa7.14□□□□□ -1.27
CASC9-201ENST00000504531 ARL14EPLP0DKL9 152 aa7.14□□□□□ -1.27
CASC9-201ENST00000504531 PPIAL4FP0DN26 164 aa7.14□□□□□ -1.27
CASC9-201ENST00000504531 LGALS7P47929 136 aa7.14□□□□□ -1.27
CASC9-201ENST00000504531 TDGF1P3P51864 188 aa7.14□□□□□ -1.27
CASC9-201ENST00000504531 SELENOTP62341 195 aa7.14□□□□□ -1.27
CASC9-201ENST00000504531 LBHQ53QV2 105 aaPredicted RBP7.14□□□□□ -1.27
CASC9-201ENST00000504531 MIC13Q5XKP0 118 aa7.14□□□□□ -1.27
CASC9-201ENST00000504531 LYG1Q8N1E2 194 aa7.14□□□□□ -1.27
CASC9-201ENST00000504531 OR4C13Q8NGP0 309 aa7.14□□□□□ -1.27
CASC9-201ENST00000504531 SFRP2Q96HF1 295 aa7.14□□□□□ -1.27
CASC9-201ENST00000504531 NDUFA4L2Q9NRX3 87 aa7.14□□□□□ -1.27
CASC9-201ENST00000504531 FUT9Q9Y231 359 aa7.14□□□□□ -1.27
CASC9-201ENST00000504531 PPIAL4AQ9Y536 164 aa7.14□□□□□ -1.27
CASC9-201ENST00000504531 ATMQ13315 3056 aa7.14□□□□□ -1.27
CASC9-201ENST00000504531 PTPRQQ9UMZ3 2332 aa7.13□□□□□ -1.27
CASC9-201ENST00000504531 CFAP46Q8IYW2 2715 aa7.13□□□□□ -1.27
CASC9-201ENST00000504531 MYO18BQ8IUG5 2567 aa7.13□□□□□ -1.27
CASC9-201ENST00000504531 TRAV3A0A0B4J244 114 aa7.13□□□□□ -1.27
CASC9-201ENST00000504531 MDFIC2A0A1B0GVS7 189 aa7.13□□□□□ -1.27
CASC9-201ENST00000504531 TMEM178BH3BS89 294 aa7.13□□□□□ -1.27
CASC9-201ENST00000504531 NDUFB4O95168 129 aa7.13□□□□□ -1.27
CASC9-201ENST00000504531 ESDP10768 282 aa7.13□□□□□ -1.27
CASC9-201ENST00000504531 IL3RAP26951 378 aa7.13□□□□□ -1.27
CASC9-201ENST00000504531 LINC00205P59089 165 aa7.13□□□□□ -1.27
CASC9-201ENST00000504531 TAS2R60P59551 318 aa7.13□□□□□ -1.27
CASC9-201ENST00000504531 RPL15P61313 204 aaKnown RBP7.13□□□□□ -1.27
CASC9-201ENST00000504531 PKIAP61925 76 aa7.13□□□□□ -1.27
CASC9-201ENST00000504531 CD69Q07108 199 aa7.13□□□□□ -1.27
CASC9-201ENST00000504531 FAM27E3Q08E93 113 aa7.13□□□□□ -1.27
CASC9-201ENST00000504531 ADIPOQQ15848 244 aa7.13□□□□□ -1.27
CASC9-201ENST00000504531 HLA-DRB5Q30154 266 aa7.13□□□□□ -1.27
CASC9-201ENST00000504531 GAGE13Q4V321 117 aa7.13□□□□□ -1.27
CASC9-201ENST00000504531 CST9LP1Q5W188 147 aa7.13□□□□□ -1.27
CASC9-201ENST00000504531 ETFRF1Q6IPR1 90 aa7.13□□□□□ -1.27
CASC9-201ENST00000504531 TEX38Q6PEX7 206 aa7.13□□□□□ -1.27
CASC9-201ENST00000504531 DOLPP1Q86YN1 238 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms