RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 H1FOOQ8IZA3 346 aaPredicted RBP2.55□□□□□ -2
USP46-205ENST00000504078 GDPD1Q8N9F7 314 aa2.55□□□□□ -2
USP46-205ENST00000504078 CCDC197Q8NCU1 140 aa2.55□□□□□ -2
USP46-205ENST00000504078 OR51H1Q8NH63 302 aa2.55□□□□□ -2
USP46-205ENST00000504078 ZNRF2Q8NHG8 242 aa2.55□□□□□ -2
USP46-205ENST00000504078 TMEM167AQ8TBQ9 72 aa2.55□□□□□ -2
USP46-205ENST00000504078 SCARB1Q8WTV0 552 aa2.55□□□□□ -2
USP46-205ENST00000504078 NUDCD2Q8WVJ2 157 aa2.55□□□□□ -2
USP46-205ENST00000504078 SECTM1Q8WVN6 248 aa2.55□□□□□ -2
USP46-205ENST00000504078 PINX1Q96BK5 328 aaKnown RBP2.55□□□□□ -2
USP46-205ENST00000504078 BSCL2Q96G97 398 aaPredicted RBP2.55□□□□□ -2
USP46-205ENST00000504078 ADTRPQ96IZ2 230 aa2.55□□□□□ -2
USP46-205ENST00000504078 UHRF2Q96PU4 802 aa2.55□□□□□ -2
USP46-205ENST00000504078 ABHD1Q96SE0 405 aa2.55□□□□□ -2
USP46-205ENST00000504078 ATP6V0BQ99437 205 aa2.55□□□□□ -2
USP46-205ENST00000504078 UQCC2Q9BRT2 126 aa2.55□□□□□ -2
USP46-205ENST00000504078 URM1Q9BTM9 101 aaKnown RBP2.55□□□□□ -2
USP46-205ENST00000504078 FGF20Q9NP95 211 aaPredicted RBP2.55□□□□□ -2
USP46-205ENST00000504078 TMEM140Q9NV12 185 aa2.55□□□□□ -2
USP46-205ENST00000504078 BABAM2Q9NXR7 383 aa2.55□□□□□ -2
USP46-205ENST00000504078 KCNK7Q9Y2U2 307 aa2.55□□□□□ -2
USP46-205ENST00000504078 PRELID3BQ9Y3B1 194 aa2.55□□□□□ -2
USP46-205ENST00000504078 AK6Q9Y3D8 172 aaKnown RBP2.55□□□□□ -2
USP46-205ENST00000504078 VPS13BQ7Z7G8 4022 aa2.54□□□□□ -2
USP46-205ENST00000504078 TMEM272A0A1B0GTI8 110 aa2.54□□□□□ -2
USP46-205ENST00000504078 A4D1N5 150 aa2.54□□□□□ -2
USP46-205ENST00000504078 C15orf62A8K5M9 175 aa2.54□□□□□ -2
USP46-205ENST00000504078 MFNGO00587 321 aa2.54□□□□□ -2
USP46-205ENST00000504078 IGLV2-14P01704 120 aa2.54□□□□□ -2
USP46-205ENST00000504078 UBBP0CG47 229 aa2.54□□□□□ -2
USP46-205ENST00000504078 SPP1P10451 314 aa2.54□□□□□ -2
USP46-205ENST00000504078 FCGR1AP12314 374 aa2.54□□□□□ -2
USP46-205ENST00000504078 HOXB6P17509 224 aaKnown RBP2.54□□□□□ -2
USP46-205ENST00000504078 NPY1RP25929 384 aa2.54□□□□□ -2
USP46-205ENST00000504078 PTBP1P26599 531 aaKnown RBP eCLIP2.54□□□□□ -2
USP46-205ENST00000504078 SERPINB10P48595 397 aa2.54□□□□□ -2
USP46-205ENST00000504078 OR10A3P58181 314 aa2.54□□□□□ -2
USP46-205ENST00000504078 TAS2R43P59537 309 aa2.54□□□□□ -2
USP46-205ENST00000504078 FXYD4P59646 89 aa2.54□□□□□ -2
USP46-205ENST00000504078 KRTAP10-1P60331 282 aa2.54□□□□□ -2
USP46-205ENST00000504078 DAD1P61803 113 aa2.54□□□□□ -2
USP46-205ENST00000504078 TPBGQ13641 420 aa2.54□□□□□ -2
USP46-205ENST00000504078 RAB11BQ15907 218 aa2.54□□□□□ -2
USP46-205ENST00000504078 ACSM3Q53FZ2 586 aa2.54□□□□□ -2
USP46-205ENST00000504078 HSD17B12Q53GQ0 312 aa2.54□□□□□ -2
USP46-205ENST00000504078 C1orf100Q5SVJ3 147 aa2.54□□□□□ -2
USP46-205ENST00000504078 GDF5OSQ5U4N7 250 aa2.54□□□□□ -2
USP46-205ENST00000504078 AHSA2Q719I0 299 aa2.54□□□□□ -2
USP46-205ENST00000504078 TMEM17Q86X19 198 aa2.54□□□□□ -2
USP46-205ENST00000504078 LYPD1Q8N2G4 141 aa2.54□□□□□ -2
USP46-205ENST00000504078 CSNK1G2-AS1Q8NCQ2 148 aa2.54□□□□□ -2
USP46-205ENST00000504078 DMBX1Q8NFW5 382 aa2.54□□□□□ -2
USP46-205ENST00000504078 OR56B1Q8NGI3 324 aa2.54□□□□□ -2
USP46-205ENST00000504078 RHOXF1Q8NHV9 184 aa2.54□□□□□ -2
USP46-205ENST00000504078 VSTM2AQ8TAG5 236 aa2.54□□□□□ -2
USP46-205ENST00000504078 TRUB1Q8WWH5 349 aaKnown RBP2.54□□□□□ -2
USP46-205ENST00000504078 TMEM203Q969S6 136 aa2.54□□□□□ -2
USP46-205ENST00000504078 SLC25A46Q96AG3 418 aa2.54□□□□□ -2
USP46-205ENST00000504078 RAB3CQ96E17 227 aa2.54□□□□□ -2
USP46-205ENST00000504078 CENPNQ96H22 339 aaPredicted RBP2.54□□□□□ -2
USP46-205ENST00000504078 NIPSNAP3BQ9BS92 247 aa2.54□□□□□ -2
USP46-205ENST00000504078 C1orf43Q9BWL3 253 aa2.54□□□□□ -2
USP46-205ENST00000504078 QTRT1Q9BXR0 403 aaKnown RBP2.54□□□□□ -2
USP46-205ENST00000504078 COMMD5Q9GZQ3 224 aa2.54□□□□□ -2
USP46-205ENST00000504078 MED4Q9NPJ6 270 aa2.54□□□□□ -2
USP46-205ENST00000504078 ZNF586Q9NXT0 402 aa2.54□□□□□ -2
USP46-205ENST00000504078 DKK2Q9UBU2 259 aa2.54□□□□□ -2
USP46-205ENST00000504078 DIMT1Q9UNQ2 313 aaKnown RBP2.54□□□□□ -2
USP46-205ENST00000504078 LINC00588Q9Y4M8 146 aa2.54□□□□□ -2
USP46-205ENST00000504078 YTHDF2Q9Y5A9 579 aaKnown RBP2.54□□□□□ -2
USP46-205ENST00000504078 PUS1Q9Y606 427 aaKnown RBP eCLIP2.54□□□□□ -2
USP46-205ENST00000504078 F11RQ9Y624 299 aaKnown RBP2.54□□□□□ -2
USP46-205ENST00000504078 FLG2Q5D862 2391 aaPredicted RBP2.53□□□□□ -2
USP46-205ENST00000504078 TRAV14DV4A0A0A6YYC5 116 aa2.53□□□□□ -2
USP46-205ENST00000504078 A0A1B0GU03 582 aa2.53□□□□□ -2
USP46-205ENST00000504078 LOC102723971A0A1B0GUV8 181 aa2.53□□□□□ -2
USP46-205ENST00000504078 LOC100130705A0A1B0GUX0 176 aa2.53□□□□□ -2
USP46-205ENST00000504078 TMEM235A6NFC5 223 aa2.53□□□□□ -2
USP46-205ENST00000504078 HELTA6NFD8 242 aa2.53□□□□□ -2
USP46-205ENST00000504078 FAM25EA8MYX2 175 aa2.53□□□□□ -2
USP46-205ENST00000504078 F5H768 121 aa2.53□□□□□ -2
USP46-205ENST00000504078 K7EMT4 169 aa2.53□□□□□ -2
USP46-205ENST00000504078 K7EQG2 157 aa2.53□□□□□ -2
USP46-205ENST00000504078 UPK2O00526 184 aa2.53□□□□□ -2
USP46-205ENST00000504078 SLC17A2O00624 439 aa2.53□□□□□ -2
USP46-205ENST00000504078 GNG7O60262 68 aa2.53□□□□□ -2
USP46-205ENST00000504078 MT-CO2P00403 227 aa2.53□□□□□ -2
USP46-205ENST00000504078 CTSGP08311 255 aa2.53□□□□□ -2
USP46-205ENST00000504078 SPART-AS1P0CW21 52 aa2.53□□□□□ -2
USP46-205ENST00000504078 DEFB130BP0DP73 79 aa2.53□□□□□ -2
USP46-205ENST00000504078 DEFB130AP0DP74 79 aa2.53□□□□□ -2
USP46-205ENST00000504078 CD37P11049 281 aa2.53□□□□□ -2
USP46-205ENST00000504078 HIST1H1DP16402 221 aaKnown RBP2.53□□□□□ -2
USP46-205ENST00000504078 MAPK3P27361 379 aaPredicted RBP2.53□□□□□ -2
USP46-205ENST00000504078 DCKP27707 260 aa2.53□□□□□ -2
USP46-205ENST00000504078 P2RY1P47900 373 aa2.53□□□□□ -2
USP46-205ENST00000504078 RASSF2P50749 326 aa2.53□□□□□ -2
USP46-205ENST00000504078 LINC00315P59091 139 aa2.53□□□□□ -2
USP46-205ENST00000504078 RPS25P62851 125 aaKnown RBP2.53□□□□□ -2
USP46-205ENST00000504078 PAFAH1B2P68402 229 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms