RNA–Protein interactions for RNA: ENST00000502415.5

POLR2J3-206, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-206ENST00000502415 MT-CO2P00403 227 aa11.46□□□□□ -0.57
POLR2J3-206ENST00000502415 PRSS3P35030 304 aa11.46□□□□□ -0.57
POLR2J3-206ENST00000502415 SNCAP37840 140 aa11.46□□□□□ -0.57
POLR2J3-206ENST00000502415 TRAV2A0A0B4J234 112 aa11.45□□□□□ -0.58
POLR2J3-206ENST00000502415 SMIM31A0A1B0GVY4 71 aa11.45□□□□□ -0.58
POLR2J3-206ENST00000502415 SUB1P53999 127 aaKnown RBP eCLIP11.45□□□□□ -0.58
POLR2J3-206ENST00000502415 ZNF124Q15973 351 aa11.45□□□□□ -0.58
POLR2J3-206ENST00000502415 PHLDA2Q53GA4 152 aa11.45□□□□□ -0.58
POLR2J3-206ENST00000502415 PDCD10Q9BUL8 212 aa11.45□□□□□ -0.58
POLR2J3-206ENST00000502415 RABAC1Q9UI14 185 aa11.45□□□□□ -0.58
POLR2J3-206ENST00000502415 IGHV3OR16-13A0A075B7E8 117 aa11.44□□□□□ -0.58
POLR2J3-206ENST00000502415 IGHV3-74A0A0B4J1X5 117 aa11.44□□□□□ -0.58
POLR2J3-206ENST00000502415 IGLL5B9A064 214 aa11.44□□□□□ -0.58
POLR2J3-206ENST00000502415 I3L2K1 104 aa11.44□□□□□ -0.58
POLR2J3-206ENST00000502415 ATG12O94817 140 aa11.44□□□□□ -0.58
POLR2J3-206ENST00000502415 EIF2B2P49770 351 aaKnown RBP11.44□□□□□ -0.58
POLR2J3-206ENST00000502415 TAS2R20P59543 309 aa11.44□□□□□ -0.58
POLR2J3-206ENST00000502415 DEFB131AP59861 70 aa11.44□□□□□ -0.58
POLR2J3-206ENST00000502415 HSPE1P61604 102 aaKnown RBP11.44□□□□□ -0.58
POLR2J3-206ENST00000502415 PRCDQ00LT1 54 aa11.44□□□□□ -0.58
POLR2J3-206ENST00000502415 ZNF600Q6ZNG1 722 aa11.44□□□□□ -0.58
POLR2J3-206ENST00000502415 ZNF114Q8NC26 417 aa11.44□□□□□ -0.58
POLR2J3-206ENST00000502415 RNF167Q9H6Y7 350 aa11.44□□□□□ -0.58
POLR2J3-206ENST00000502415 CORTO00230 105 aa11.43□□□□□ -0.58
POLR2J3-206ENST00000502415 NPPCP23582 126 aa11.43□□□□□ -0.58
POLR2J3-206ENST00000502415 HRH1P35367 487 aa11.43□□□□□ -0.58
POLR2J3-206ENST00000502415 FAM90A2PQ658T7 463 aa11.43□□□□□ -0.58
POLR2J3-206ENST00000502415 TBC1D26Q86UD7 250 aa11.43□□□□□ -0.58
POLR2J3-206ENST00000502415 SLC35G3Q8N808 338 aa11.43□□□□□ -0.58
POLR2J3-206ENST00000502415 SAMD12Q8N8I0 201 aa11.43□□□□□ -0.58
POLR2J3-206ENST00000502415 FXYD6Q9H0Q3 95 aa11.43□□□□□ -0.58
POLR2J3-206ENST00000502415 MS4A6AQ9H2W1 248 aa11.43□□□□□ -0.58
POLR2J3-206ENST00000502415 ENY2Q9NPA8 101 aa11.43□□□□□ -0.58
POLR2J3-206ENST00000502415 NAT1P18440 290 aa11.42□□□□□ -0.58
POLR2J3-206ENST00000502415 HLA-DMAP28067 261 aa11.42□□□□□ -0.58
POLR2J3-206ENST00000502415 NEDD8Q15843 81 aa11.42□□□□□ -0.58
POLR2J3-206ENST00000502415 LEMD1Q68G75 181 aa11.42□□□□□ -0.58
POLR2J3-206ENST00000502415 MORN3Q6PF18 240 aaPredicted RBP11.42□□□□□ -0.58
POLR2J3-206ENST00000502415 TOMM20LQ6UXN7 152 aa11.42□□□□□ -0.58
POLR2J3-206ENST00000502415 ST8SIA2Q92186 375 aa11.42□□□□□ -0.58
POLR2J3-206ENST00000502415 GRAMD2BQ96HH9 432 aa11.42□□□□□ -0.58
POLR2J3-206ENST00000502415 METTL26Q96S19 204 aa11.42□□□□□ -0.58
POLR2J3-206ENST00000502415 HRH4Q9H3N8 390 aa11.42□□□□□ -0.58
POLR2J3-206ENST00000502415 VSIRQ9H7M9 311 aa11.42□□□□□ -0.58
POLR2J3-206ENST00000502415 ANAPC10Q9UM13 185 aa11.42□□□□□ -0.58
POLR2J3-206ENST00000502415 PUS1Q9Y606 427 aaKnown RBP eCLIP11.42□□□□□ -0.58
POLR2J3-206ENST00000502415 DEFB4AO15263 64 aa11.41□□□□□ -0.58
POLR2J3-206ENST00000502415 IFNA17P01571 189 aa11.41□□□□□ -0.58
POLR2J3-206ENST00000502415 IGHV3-48P01763 117 aa11.41□□□□□ -0.58
POLR2J3-206ENST00000502415 SPP1P10451 314 aa11.41□□□□□ -0.58
POLR2J3-206ENST00000502415 MIFP14174 115 aa11.41□□□□□ -0.58
POLR2J3-206ENST00000502415 TMEM230Q96A57 120 aa11.41□□□□□ -0.58
POLR2J3-206ENST00000502415 MRGPRFQ96AM1 343 aa11.41□□□□□ -0.58
POLR2J3-206ENST00000502415 SEC22AQ96IW7 307 aa11.41□□□□□ -0.58
POLR2J3-206ENST00000502415 VCX3AQ9NNX9 186 aa11.41□□□□□ -0.58
POLR2J3-206ENST00000502415 TRAV10A0A0B4J240 114 aa11.4□□□□□ -0.58
POLR2J3-206ENST00000502415 DBX1A6NMT0 343 aa11.4□□□□□ -0.58
POLR2J3-206ENST00000502415 AKR1C2P52895 323 aa11.4□□□□□ -0.58
POLR2J3-206ENST00000502415 KCTD21Q4G0X4 260 aa11.4□□□□□ -0.58
POLR2J3-206ENST00000502415 STXBP6Q8NFX7 210 aa11.4□□□□□ -0.58
POLR2J3-206ENST00000502415 ZNF414Q96IQ9 312 aa11.4□□□□□ -0.58
POLR2J3-206ENST00000502415 IGHV3-66A0A0C4DH42 116 aa11.39□□□□□ -0.59
POLR2J3-206ENST00000502415 PGAM2P15259 253 aa11.39□□□□□ -0.59
POLR2J3-206ENST00000502415 RCVRNP35243 200 aa11.39□□□□□ -0.59
POLR2J3-206ENST00000502415 HOXA1P49639 335 aaPredicted RBP11.39□□□□□ -0.59
POLR2J3-206ENST00000502415 UCP3P55916 312 aa11.39□□□□□ -0.59
POLR2J3-206ENST00000502415 RNASE11Q8TAA1 199 aaKnown RBP11.39□□□□□ -0.59
POLR2J3-206ENST00000502415 KRTAP17-1Q9BYP8 105 aa11.39□□□□□ -0.59
POLR2J3-206ENST00000502415 SCPEP1Q9HB40 452 aa11.39□□□□□ -0.59
POLR2J3-206ENST00000502415 KMT2AQ03164 3969 aa11.38□□□□□ -0.59
POLR2J3-206ENST00000502415 TRAV30A0A087WSZ9 112 aa11.38□□□□□ -0.59
POLR2J3-206ENST00000502415 TMEM50AO95807 157 aa11.38□□□□□ -0.59
POLR2J3-206ENST00000502415 NUTF2P61970 127 aaKnown RBP11.38□□□□□ -0.59
POLR2J3-206ENST00000502415 LINC00336Q6ZUF6 198 aa11.38□□□□□ -0.59
POLR2J3-206ENST00000502415 RRNAD1Q96FB5 475 aaKnown RBP11.38□□□□□ -0.59
POLR2J3-206ENST00000502415 APLNQ9ULZ1 77 aa11.38□□□□□ -0.59
POLR2J3-206ENST00000502415 FRAS1Q86XX4 4008 aa11.38□□□□□ -0.59
POLR2J3-206ENST00000502415 RPS10-NUDT3A0A1W2PQS6 291 aa11.37□□□□□ -0.59
POLR2J3-206ENST00000502415 APOHP02749 345 aaPredicted RBP11.37□□□□□ -0.59
POLR2J3-206ENST00000502415 HLA-DMBP28068 263 aa11.37□□□□□ -0.59
POLR2J3-206ENST00000502415 OPRK1P41145 380 aa11.37□□□□□ -0.59
POLR2J3-206ENST00000502415 AP2S1P53680 142 aaPredicted RBP11.37□□□□□ -0.59
POLR2J3-206ENST00000502415 LYSMD2Q8IV50 215 aa11.37□□□□□ -0.59
POLR2J3-206ENST00000502415 Q8NAQ8 132 aa11.37□□□□□ -0.59
POLR2J3-206ENST00000502415 GPX8Q8TED1 209 aa11.37□□□□□ -0.59
POLR2J3-206ENST00000502415 ZNF486Q96H40 463 aaPredicted RBP11.37□□□□□ -0.59
POLR2J3-206ENST00000502415 IGHV4-28A0A0C4DH34 117 aa11.36□□□□□ -0.59
POLR2J3-206ENST00000502415 HELTA6NFD8 242 aa11.36□□□□□ -0.59
POLR2J3-206ENST00000502415 ATP6V1G2O95670 118 aa11.36□□□□□ -0.59
POLR2J3-206ENST00000502415 NPY1RP25929 384 aa11.36□□□□□ -0.59
POLR2J3-206ENST00000502415 RPS19P39019 145 aaKnown RBP11.36□□□□□ -0.59
POLR2J3-206ENST00000502415 P2RY1P47900 373 aa11.36□□□□□ -0.59
POLR2J3-206ENST00000502415 TRIM16LQ309B1 348 aa11.36□□□□□ -0.59
POLR2J3-206ENST00000502415 SPINK9Q5DT21 86 aa11.36□□□□□ -0.59
POLR2J3-206ENST00000502415 SNX29P2Q8IUI4 249 aa11.36□□□□□ -0.59
POLR2J3-206ENST00000502415 C1QTNF4Q9BXJ3 329 aa11.36□□□□□ -0.59
POLR2J3-206ENST00000502415 ZFAND3Q9H8U3 227 aa11.36□□□□□ -0.59
POLR2J3-206ENST00000502415 COMMD3Q9UBI1 195 aa11.36□□□□□ -0.59
POLR2J3-206ENST00000502415 TBC1D24Q9ULP9 559 aa11.36□□□□□ -0.59
POLR2J3-206ENST00000502415 IGHV4-4A0A075B6R2 117 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms