RNA–Protein interactions for RNA: ENST00000498678.5

HOXB3-212, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXB3, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-212ENST00000498678 FCN1O00602 326 aa20.81■□□□□ 0.92
HOXB3-212ENST00000498678 NBR2O15453 112 aa20.81■□□□□ 0.92
HOXB3-212ENST00000498678 MSMBP08118 114 aa20.81■□□□□ 0.92
HOXB3-212ENST00000498678 RPL27AP46776 148 aaKnown RBP20.81■□□□□ 0.92
HOXB3-212ENST00000498678 COMPP49747 757 aaPredicted RBP20.81■□□□□ 0.92
HOXB3-212ENST00000498678 HES1Q14469 280 aa20.81■□□□□ 0.92
HOXB3-212ENST00000498678 PIP4P2Q8N4L2 257 aa20.81■□□□□ 0.92
HOXB3-212ENST00000498678 OR2T10Q8NGZ9 312 aa20.81■□□□□ 0.92
HOXB3-212ENST00000498678 SMCO3A2RU48 225 aa20.8■□□□□ 0.92
HOXB3-212ENST00000498678 NPFFO15130 113 aa20.8■□□□□ 0.92
HOXB3-212ENST00000498678 TSPAN15O95858 294 aa20.8■□□□□ 0.92
HOXB3-212ENST00000498678 SEC11CQ9BY50 192 aa20.8■□□□□ 0.92
HOXB3-212ENST00000498678 RPRMQ9NS64 109 aa20.8■□□□□ 0.92
HOXB3-212ENST00000498678 CELSR2Q9HCU4 2923 aa20.8■□□□□ 0.92
HOXB3-212ENST00000498678 AGPAT2O15120 278 aa20.8■□□□□ 0.92
HOXB3-212ENST00000498678 NDUFA3O95167 84 aa20.8■□□□□ 0.92
HOXB3-212ENST00000498678 OR13C7P0DN81 318 aa20.8■□□□□ 0.92
HOXB3-212ENST00000498678 SSBP2P81877 361 aaPredicted RBP20.8■□□□□ 0.92
HOXB3-212ENST00000498678 EBI3Q14213 229 aa20.8■□□□□ 0.92
HOXB3-212ENST00000498678 BEX4Q9NWD9 120 aaPredicted RBP20.8■□□□□ 0.92
HOXB3-212ENST00000498678 CD81P60033 236 aa20.79■□□□□ 0.92
HOXB3-212ENST00000498678 GNB1P62873 340 aa20.79■□□□□ 0.92
HOXB3-212ENST00000498678 SRSF3P84103 164 aaKnown RBP20.79■□□□□ 0.92
HOXB3-212ENST00000498678 PLGLAQ15195 96 aa20.79■□□□□ 0.92
HOXB3-212ENST00000498678 PLXNB1O43157 2135 aa20.79■□□□□ 0.92
HOXB3-212ENST00000498678 A0A096LNT2 108 aa20.79■□□□□ 0.92
HOXB3-212ENST00000498678 IGLC7A0M8Q6 106 aa20.79■□□□□ 0.92
HOXB3-212ENST00000498678 C1orf159Q96HA4 380 aa20.79■□□□□ 0.92
HOXB3-212ENST00000498678 PSMG3-AS1Q96PY0 264 aa20.79■□□□□ 0.92
HOXB3-212ENST00000498678 NPVFQ9HCQ7 196 aa20.79■□□□□ 0.92
HOXB3-212ENST00000498678 SMCO4Q9NRQ5 59 aa20.79■□□□□ 0.92
HOXB3-212ENST00000498678 ELLP55199 621 aaPredicted RBP20.78■□□□□ 0.92
HOXB3-212ENST00000498678 DEFB113Q30KQ7 82 aa20.78■□□□□ 0.92
HOXB3-212ENST00000498678 Q8N6K4 173 aa20.78■□□□□ 0.92
HOXB3-212ENST00000498678 PTPN13Q12923 2485 aa20.78■□□□□ 0.92
HOXB3-212ENST00000498678 TENM4Q6N022 2769 aa20.78■□□□□ 0.92
HOXB3-212ENST00000498678 CSMD2Q7Z408 3487 aa20.78■□□□□ 0.92
HOXB3-212ENST00000498678 B4DSR2 109 aa20.78■□□□□ 0.92
HOXB3-212ENST00000498678 TCAPO15273 167 aa20.78■□□□□ 0.92
HOXB3-212ENST00000498678 MPDU1O75352 247 aa20.78■□□□□ 0.92
HOXB3-212ENST00000498678 ACSM6Q6P461 480 aa20.78■□□□□ 0.92
HOXB3-212ENST00000498678 ZNF709Q8N972 641 aa20.78■□□□□ 0.92
HOXB3-212ENST00000498678 P2RX4Q99571 388 aa20.78■□□□□ 0.92
HOXB3-212ENST00000498678 KIAA1456Q9P272 454 aa20.78■□□□□ 0.92
HOXB3-212ENST00000498678 FNDC10F2Z333 226 aa20.77■□□□□ 0.92
HOXB3-212ENST00000498678 BPIFB3P59826 476 aa20.77■□□□□ 0.92
HOXB3-212ENST00000498678 AKR1C1Q04828 323 aa20.77■□□□□ 0.92
HOXB3-212ENST00000498678 TMEM41BQ5BJD5 291 aa20.77■□□□□ 0.92
HOXB3-212ENST00000498678 LSM4Q9Y4Z0 139 aaKnown RBP20.77■□□□□ 0.92
HOXB3-212ENST00000498678 C17orf112F2Z3M2 114 aa20.76■□□□□ 0.91
HOXB3-212ENST00000498678 ADCYAP1P18509 176 aa20.76■□□□□ 0.91
HOXB3-212ENST00000498678 SPSB3Q6PJ21 355 aa20.76■□□□□ 0.91
HOXB3-212ENST00000498678 REG1AP05451 166 aa20.76■□□□□ 0.91
HOXB3-212ENST00000498678 COMMD1Q8N668 190 aa20.76■□□□□ 0.91
HOXB3-212ENST00000498678 A0A1B0GV50 99 aa20.75■□□□□ 0.91
HOXB3-212ENST00000498678 TEX22C9J3V5 150 aa20.75■□□□□ 0.91
HOXB3-212ENST00000498678 SUB1P53999 127 aaKnown RBP eCLIP20.75■□□□□ 0.91
HOXB3-212ENST00000498678 MLANAQ16655 118 aa20.75■□□□□ 0.91
HOXB3-212ENST00000498678 LRRC75A-AS1Q8N1F1 130 aa20.75■□□□□ 0.91
HOXB3-212ENST00000498678 SRSF12Q8WXF0 261 aaKnown RBP20.75■□□□□ 0.91
HOXB3-212ENST00000498678 MGST2Q99735 147 aa20.75■□□□□ 0.91
HOXB3-212ENST00000498678 ANKRD17O75179 2603 aaKnown RBP20.75■□□□□ 0.91
HOXB3-212ENST00000498678 IGHV1-69DA0A0B4J2H0 117 aa20.75■□□□□ 0.91
HOXB3-212ENST00000498678 IGHV1-69P01742 117 aa20.75■□□□□ 0.91
HOXB3-212ENST00000498678 AREGP15514 252 aa20.75■□□□□ 0.91
HOXB3-212ENST00000498678 ZNF726P1Q15940 193 aa20.75■□□□□ 0.91
HOXB3-212ENST00000498678 C5orf64Q2M2E5 130 aa20.75■□□□□ 0.91
HOXB3-212ENST00000498678 FAM120AOSQ5T036 256 aa20.75■□□□□ 0.91
HOXB3-212ENST00000498678 MRPL41Q8IXM3 137 aaKnown RBP20.75■□□□□ 0.91
HOXB3-212ENST00000498678 POLQO75417 2590 aa20.74■□□□□ 0.91
HOXB3-212ENST00000498678 CENPEQ02224 2701 aa20.74■□□□□ 0.91
HOXB3-212ENST00000498678 IGHV3OR16-10A0A075B7F0 116 aa20.74■□□□□ 0.91
HOXB3-212ENST00000498678 AP4M1O00189 453 aa20.74■□□□□ 0.91
HOXB3-212ENST00000498678 CD69Q07108 199 aa20.74■□□□□ 0.91
HOXB3-212ENST00000498678 FFAR4Q5NUL3 377 aa20.74■□□□□ 0.91
HOXB3-212ENST00000498678 RUSC1-AS1Q66K80 236 aa20.74■□□□□ 0.91
HOXB3-212ENST00000498678 TMEM231Q9H6L2 316 aa20.74■□□□□ 0.91
HOXB3-212ENST00000498678 C7orf69Q9H7B7 122 aa20.74■□□□□ 0.91
HOXB3-212ENST00000498678 FAM96BQ9Y3D0 163 aa20.74■□□□□ 0.91
HOXB3-212ENST00000498678 FAM106CPP0CH98 169 aa20.73■□□□□ 0.91
HOXB3-212ENST00000498678 TMEM11P17152 192 aa20.73■□□□□ 0.91
HOXB3-212ENST00000498678 NPBWR1P48145 328 aa20.73■□□□□ 0.91
HOXB3-212ENST00000498678 CCL20P78556 96 aa20.73■□□□□ 0.91
HOXB3-212ENST00000498678 TEPPQ6URK8 271 aa20.73■□□□□ 0.91
HOXB3-212ENST00000498678 RPP25LQ8N5L8 163 aaKnown RBP20.73■□□□□ 0.91
HOXB3-212ENST00000498678 HIF1ANQ9NWT6 349 aa20.73■□□□□ 0.91
HOXB3-212ENST00000498678 TRAV40A0A0B4J280 105 aa20.73■□□□□ 0.91
HOXB3-212ENST00000498678 MT-ND4LP03901 98 aa20.73■□□□□ 0.91
HOXB3-212ENST00000498678 APELAP0DMC3 54 aa20.73■□□□□ 0.91
HOXB3-212ENST00000498678 BRS3P32247 399 aa20.73■□□□□ 0.91
HOXB3-212ENST00000498678 C21orf62-AS1Q17RA5 79 aa20.73■□□□□ 0.91
HOXB3-212ENST00000498678 HIST2H2BCQ6DN03 193 aa20.73■□□□□ 0.91
HOXB3-212ENST00000498678 RCC1LQ96I51 464 aaKnown RBP20.73■□□□□ 0.91
HOXB3-212ENST00000498678 SCRT1Q9BWW7 348 aa20.73■□□□□ 0.91
HOXB3-212ENST00000498678 GAMTQ14353 236 aa20.72■□□□□ 0.91
HOXB3-212ENST00000498678 SSX7Q7RTT5 188 aa20.72■□□□□ 0.91
HOXB3-212ENST00000498678 ZNF114Q8NC26 417 aa20.72■□□□□ 0.91
HOXB3-212ENST00000498678 LFNGQ8NES3 379 aa20.72■□□□□ 0.91
HOXB3-212ENST00000498678 RNASEH2CQ8TDP1 164 aaKnown RBP20.72■□□□□ 0.91
HOXB3-212ENST00000498678 GGTLC1Q9BX51 225 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms